RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YPR063CQ12160 140 aa6.11□□□□□ -1.43
NUP84YDL116W HUT1Q12520 339 aa6.11□□□□□ -1.43
NUP84YDL116W YPR014CQ6B0W2 109 aa6.11□□□□□ -1.43
NUP84YDL116W COX5BP00425 151 aa6.11□□□□□ -1.43
NUP84YDL116W ALK2P32789 676 aaPredicted RBP6.11□□□□□ -1.43
NUP84YDL116W YPC1P38298 316 aa6.11□□□□□ -1.43
NUP84YDL116W ELO1P39540 310 aa6.11□□□□□ -1.43
NUP84YDL116W PRP39P39682 629 aaKnown RBP6.11□□□□□ -1.43
NUP84YDL116W YND1P40009 630 aa6.11□□□□□ -1.43
NUP84YDL116W SLZ1P40167 298 aa6.11□□□□□ -1.43
NUP84YDL116W CUP9P41817 306 aa6.11□□□□□ -1.43
NUP84YDL116W MTM1P53320 366 aa6.11□□□□□ -1.43
NUP84YDL116W MRPL19P53875 158 aa6.11□□□□□ -1.43
NUP84YDL116W SAM50P53969 484 aa6.11□□□□□ -1.43
NUP84YDL116W CYT2Q00873 224 aa6.11□□□□□ -1.43
NUP84YDL116W STD1Q02794 444 aa6.11□□□□□ -1.43
NUP84YDL116W HOF1Q05080 669 aa6.11□□□□□ -1.43
NUP84YDL116W TMA10Q06177 86 aa6.11□□□□□ -1.43
NUP84YDL116W YLR456WQ06199 204 aa6.11□□□□□ -1.43
NUP84YDL116W YOL118CQ08259 102 aa6.11□□□□□ -1.43
NUP84YDL116W USV1Q12132 391 aa6.11□□□□□ -1.43
NUP84YDL116W ISA2Q12425 185 aa6.11□□□□□ -1.43
NUP84YDL116W FUN14P18411 198 aa6.1□□□□□ -1.43
NUP84YDL116W ERG2P32352 222 aa6.1□□□□□ -1.43
NUP84YDL116W MRPL11P36521 249 aaPredicted RBP6.1□□□□□ -1.43
NUP84YDL116W YHR210CP38893 341 aa6.1□□□□□ -1.43
NUP84YDL116W YJL193WP39542 402 aa6.1□□□□□ -1.43
NUP84YDL116W YEA4P40004 342 aa6.1□□□□□ -1.43
NUP84YDL116W GWT1P47026 490 aa6.1□□□□□ -1.43
NUP84YDL116W YJR012CP47087 207 aa6.1□□□□□ -1.43
NUP84YDL116W YGR149WP48236 432 aa6.1□□□□□ -1.43
NUP84YDL116W YGL262WP53054 175 aa6.1□□□□□ -1.43
NUP84YDL116W HCH1P53834 153 aa6.1□□□□□ -1.43
NUP84YDL116W FAB1P34756 2278 aa6.1□□□□□ -1.43
NUP84YDL116W MES1P00958 751 aaKnown RBP6.1□□□□□ -1.43
NUP84YDL116W GLC7P32598 312 aaKnown RBP6.1□□□□□ -1.43
NUP84YDL116W SHB17P36136 271 aaKnown RBP6.1□□□□□ -1.43
NUP84YDL116W YGR126WP53274 230 aa6.1□□□□□ -1.43
NUP84YDL116W ALG6Q12001 544 aaKnown RBP6.1□□□□□ -1.43
NUP84YDL116W MCP1Q12106 302 aa6.1□□□□□ -1.43
NUP84YDL116W ATG5Q12380 294 aa6.1□□□□□ -1.43
NUP84YDL116W YOR192C-CQ3E736 78 aa6.1□□□□□ -1.43
NUP84YDL116W RPS25BP0C0T4 108 aaKnown RBP6.09□□□□□ -1.43
NUP84YDL116W MRPL44P19956 98 aa6.09□□□□□ -1.43
NUP84YDL116W STP22P25604 385 aa6.09□□□□□ -1.43
NUP84YDL116W PFS1P38872 237 aa6.09□□□□□ -1.43
NUP84YDL116W MRP51Q02950 344 aa6.09□□□□□ -1.43
NUP84YDL116W YPD1Q07688 167 aa6.09□□□□□ -1.43
NUP84YDL116W AIM45Q12480 344 aaKnown RBP6.09□□□□□ -1.43
NUP84YDL116W RPS25AQ3E792 108 aaPredicted RBP6.09□□□□□ -1.43
NUP84YDL116W YNR034W-AQ3E841 98 aa6.09□□□□□ -1.43
NUP84YDL116W MSW1P04803 379 aa6.08□□□□□ -1.44
NUP84YDL116W MIR1P23641 311 aaKnown RBP6.08□□□□□ -1.44
NUP84YDL116W COQ3P27680 312 aa6.08□□□□□ -1.44
NUP84YDL116W AVT5P38176 459 aa6.08□□□□□ -1.44
NUP84YDL116W SPC25P40014 221 aa6.08□□□□□ -1.44
NUP84YDL116W PAU15P40585 124 aa6.08□□□□□ -1.44
NUP84YDL116W MOB2P43563 287 aa6.08□□□□□ -1.44
NUP84YDL116W YMR082CQ04276 118 aa6.08□□□□□ -1.44
NUP84YDL116W GRE1Q08969 168 aa6.08□□□□□ -1.44
NUP84YDL116W YBR182C-AQ8TGU6 64 aa6.08□□□□□ -1.44
NUP84YDL116W SEC16P48415 2195 aaKnown RBP6.08□□□□□ -1.44
NUP84YDL116W BLM10P43583 2143 aa6.08□□□□□ -1.44
NUP84YDL116W CFD1P40558 293 aa6.08□□□□□ -1.44
NUP84YDL116W SMX3P54999 86 aaPredicted RBP6.08□□□□□ -1.44
NUP84YDL116W YPL039WQ03080 316 aa6.08□□□□□ -1.44
NUP84YDL116W YMR090WQ04304 227 aaKnown RBP6.08□□□□□ -1.44
NUP84YDL116W CTR3Q06686 241 aa6.08□□□□□ -1.44
NUP84YDL116W CSI2Q08054 341 aa6.08□□□□□ -1.44
NUP84YDL116W FRE7Q12333 620 aa6.08□□□□□ -1.44
NUP84YDL116W CMC2Q3E7A4 109 aa6.08□□□□□ -1.44
NUP84YDL116W HUG1Q6Q5K6 68 aa6.08□□□□□ -1.44
NUP84YDL116W YFL054CP43549 646 aa6.07□□□□□ -1.44
NUP84YDL116W PUS4P48567 403 aaKnown RBP6.07□□□□□ -1.44
NUP84YDL116W MSO1P53604 210 aaKnown RBP6.07□□□□□ -1.44
NUP84YDL116W CUE4Q04201 117 aaPredicted RBP6.07□□□□□ -1.44
NUP84YDL116W STP3Q05937 343 aa6.07□□□□□ -1.44
NUP84YDL116W MED7Q08278 222 aa6.07□□□□□ -1.44
NUP84YDL116W FCY22Q12119 530 aa6.07□□□□□ -1.44
NUP84YDL116W NCE102Q12207 173 aaRIP-Chip data6.07□□□□□ -1.44not detected
NUP84YDL116W TAD3Q9URQ3 322 aa6.07□□□□□ -1.44
NUP84YDL116W CET1O13297 549 aaPredicted RBP6.07□□□□□ -1.44
NUP84YDL116W YAL064W-BO13512 126 aa6.07□□□□□ -1.44
NUP84YDL116W MDM35O60200 86 aa6.07□□□□□ -1.44
NUP84YDL116W CDC7P06243 507 aa6.07□□□□□ -1.44
NUP84YDL116W SPS4P09937 338 aa6.07□□□□□ -1.44
NUP84YDL116W BET2P20133 325 aa6.07□□□□□ -1.44
NUP84YDL116W PAC2P39937 518 aa6.07□□□□□ -1.44
NUP84YDL116W YPS6P40583 537 aa6.07□□□□□ -1.44
NUP84YDL116W AIM24P47127 394 aa6.07□□□□□ -1.44
NUP84YDL116W OST3P48439 350 aa6.07□□□□□ -1.44
NUP84YDL116W YVH1Q02256 364 aaKnown RBP6.07□□□□□ -1.44
NUP84YDL116W GIS1Q03833 894 aa6.07□□□□□ -1.44
NUP84YDL116W ATX2Q12067 313 aa6.07□□□□□ -1.44
NUP84YDL116W SWM1Q12379 170 aa6.07□□□□□ -1.44
NUP84YDL116W IZH2Q12442 317 aa6.07□□□□□ -1.44
NUP84YDL116W RAX2Q12465 1220 aa6.07□□□□□ -1.44
NUP84YDL116W AGC1Q12482 902 aa6.07□□□□□ -1.44
NUP84YDL116W AFG1P32317 509 aa6.06□□□□□ -1.44
NUP84YDL116W YBR096WP38256 230 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms