RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 YOR186WQ08560 144 aa-0.99□□□□□ -2.57
snR48snR48 YKR104WP0CE69 306 aa-1□□□□□ -2.57
snR48snR48 DBF2P22204 572 aa-1□□□□□ -2.57
snR48snR48 MRPL40P36534 297 aa-1□□□□□ -2.57
snR48snR48 YFL051CP43552 160 aa-1□□□□□ -2.57
snR48snR48 RRG8Q06109 277 aa-1□□□□□ -2.57
snR48snR48 ATG17Q06410 417 aa-1□□□□□ -2.57
snR48snR48 RAD28Q12021 506 aa-1□□□□□ -2.57
snR48snR48 CCW12Q12127 133 aa-1□□□□□ -2.57
snR48snR48 COA3Q3E7B2 85 aa-1□□□□□ -2.57
snR48snR48 AHT1P29589 182 aa-1.01□□□□□ -2.57
snR48snR48 SSQ1Q05931 657 aaPredicted RBP-1.01□□□□□ -2.57
snR48snR48 PSF1Q12488 208 aa-1.01□□□□□ -2.57
snR48snR48 YLR236CA0A023PZG4 107 aa-1.02□□□□□ -2.57
snR48snR48 SEC11P15367 167 aa-1.02□□□□□ -2.57
snR48snR48 VPS3P23643 1011 aa-1.02□□□□□ -2.57
snR48snR48 MRPL15P36523 253 aa-1.02□□□□□ -2.57
snR48snR48 UMP1P38293 148 aa-1.02□□□□□ -2.57
snR48snR48 YHL037CP38733 133 aa-1.02□□□□□ -2.57
snR48snR48 DSN1P40568 576 aa-1.02□□□□□ -2.57
snR48snR48 SNZ2P53824 298 aa-1.02□□□□□ -2.57
snR48snR48 MDM35O60200 86 aa-1.03□□□□□ -2.57
snR48snR48 YPR170W-BP0C5R9 85 aa-1.03□□□□□ -2.57
snR48snR48 QRI5P32344 111 aa-1.03□□□□□ -2.57
snR48snR48 SWE1P32944 819 aa-1.03□□□□□ -2.57
snR48snR48 THO1P40040 218 aaKnown RBP-1.03□□□□□ -2.57
snR48snR48 NAS2P40555 220 aa-1.03□□□□□ -2.57
snR48snR48 HAM1P47119 197 aaKnown RBP-1.03□□□□□ -2.57
snR48snR48 KAP114P53067 1004 aa-1.03□□□□□ -2.57
snR48snR48 CUE4Q04201 117 aaPredicted RBP-1.03□□□□□ -2.57
snR48snR48 SPG4Q04438 115 aa-1.03□□□□□ -2.57
snR48snR48 ATG40Q99325 256 aa-1.03□□□□□ -2.57
snR48snR48 HFA1P32874 2273 aa-1.03□□□□□ -2.57
snR48snR48 FRS2P15625 503 aaKnown RBP-1.04□□□□□ -2.58
snR48snR48 SNC2P33328 115 aa-1.04□□□□□ -2.58
snR48snR48 SGE1P33335 543 aa-1.04□□□□□ -2.58
snR48snR48 CAT5P41735 233 aa-1.04□□□□□ -2.58
snR48snR48 LSB1P53281 241 aa-1.04□□□□□ -2.58
snR48snR48 YRA1Q12159 226 aaKnown RBP-1.04□□□□□ -2.58
snR48snR48 SNF8Q12483 233 aa-1.04□□□□□ -2.58
snR48snR48 MET16P18408 261 aaPredicted RBP-1.05□□□□□ -2.58
snR48snR48 YPL073CP40323 161 aa-1.05□□□□□ -2.58
snR48snR48 RSM25P40496 264 aa-1.05□□□□□ -2.58
snR48snR48 YNL260CP53846 198 aa-1.05□□□□□ -2.58
snR48snR48 SNZ1Q03148 297 aa-1.05□□□□□ -2.58
snR48snR48 YDR391CQ04170 232 aa-1.05□□□□□ -2.58
snR48snR48 YML096WQ04489 525 aa-1.05□□□□□ -2.58
snR48snR48 BCP1Q06338 283 aa-1.05□□□□□ -2.58
snR48snR48 YPR203WQ08994 102 aa-1.05□□□□□ -2.58
snR48snR48 FSF1Q12029 327 aaKnown RBP-1.05□□□□□ -2.58
snR48snR48 DAL80P26343 269 aa-1.06□□□□□ -2.58
snR48snR48 VMA22P38784 181 aa-1.06□□□□□ -2.58
snR48snR48 MRX5P47007 382 aa-1.06□□□□□ -2.58
snR48snR48 YNL046WP53956 172 aa-1.06□□□□□ -2.58
snR48snR48 YDR248CQ03786 193 aa-1.06□□□□□ -2.58
snR48snR48 YPR098CQ06089 161 aa-1.06□□□□□ -2.58
snR48snR48 CUR1Q06469 252 aa-1.06□□□□□ -2.58
snR48snR48 HIS1P00498 297 aaKnown RBP-1.07□□□□□ -2.58
snR48snR48 REP2P03872 296 aa-1.07□□□□□ -2.58
snR48snR48 YJR111CP47148 283 aaKnown RBP-1.07□□□□□ -2.58
snR48snR48 ILM1P47155 203 aa-1.07□□□□□ -2.58
snR48snR48 MGA1P53050 456 aa-1.07□□□□□ -2.58
snR48snR48 YPR174CQ06616 221 aaPredicted RBP-1.07□□□□□ -2.58
snR48snR48 YHR213W-BQ8TGK1 99 aa-1.07□□□□□ -2.58
snR48snR48 ODC2Q99297 307 aa-1.07□□□□□ -2.58
snR48snR48 MSF1P08425 469 aa-1.08□□□□□ -2.58
snR48snR48 MRPL17P36528 281 aa-1.08□□□□□ -2.58
snR48snR48 GOS1P38736 223 aa-1.08□□□□□ -2.58
snR48snR48 DDI1P40087 428 aa-1.08□□□□□ -2.58
snR48snR48 ABF2Q02486 183 aa-1.08□□□□□ -2.58
snR48snR48 MET31Q03081 177 aa-1.08□□□□□ -2.58
snR48snR48 YMD8Q03697 442 aa-1.08□□□□□ -2.58
snR48snR48 OST6Q03723 332 aa-1.08□□□□□ -2.58
snR48snR48 YMR226CQ05016 267 aaKnown RBP-1.08□□□□□ -2.58
snR48snR48 GCD2P12754 651 aaPredicted RBP-1.09□□□□□ -2.58
snR48snR48 DAL82P21705 255 aa-1.09□□□□□ -2.58
snR48snR48 ATG22P25568 528 aa-1.09□□□□□ -2.58
snR48snR48 RPS5P26783 225 aaKnown RBP-1.09□□□□□ -2.58
snR48snR48 UBC8P28263 218 aa-1.09□□□□□ -2.58
snR48snR48 COA1P40452 197 aa-1.09□□□□□ -2.58
snR48snR48 GVP36P40531 326 aaKnown RBP-1.09□□□□□ -2.58
snR48snR48 RCF1Q03713 159 aa-1.09□□□□□ -2.58
snR48snR48 UPS3Q04006 179 aa-1.09□□□□□ -2.58
snR48snR48 GPM2Q12008 311 aa-1.09□□□□□ -2.58
snR48snR48 YLR307C-AQ3E825 87 aa-1.09□□□□□ -2.58
snR48snR48 YLR156WP0CE96 114 aa-1.1□□□□□ -2.59
snR48snR48 YLR159WP0CE97 114 aa-1.1□□□□□ -2.59
snR48snR48 YLR161WP0CE98 114 aa-1.1□□□□□ -2.59
snR48snR48 SHE2P36068 246 aaKnown RBP RIP-Chip data-1.1□□□□□ -2.59not detected
snR48snR48 MRPL28P36527 147 aa-1.1□□□□□ -2.59
snR48snR48 URA8P38627 578 aaPredicted RBP-1.1□□□□□ -2.59
snR48snR48 HPA3P39979 161 aa-1.1□□□□□ -2.59
snR48snR48 GCN20P43535 752 aaKnown RBP-1.1□□□□□ -2.59
snR48snR48 YNL010WP53981 241 aaKnown RBP-1.1□□□□□ -2.59
snR48snR48 RHO3Q00245 231 aaKnown RBP-1.1□□□□□ -2.59
snR48snR48 ERP4Q12450 207 aa-1.1□□□□□ -2.59
snR48snR48 TSC3Q3E790 80 aa-1.1□□□□□ -2.59
snR48snR48 TIM9O74700 87 aa-1.11□□□□□ -2.59
snR48snR48 RIB1P38066 345 aa-1.11□□□□□ -2.59
snR48snR48 YBR096WP38256 230 aa-1.11□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms