RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	CCC1	P47818	322 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	BRR6	P53062	197 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	DOC1	P53068	250 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	CGI121	Q03705	181 aa	Known RBP	2.3	□□□□□ -2.04
HAA1	YPR008W	YDR249C	Q03787	373 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	YDR387C	Q04162	555 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	AKR2	Q12013	749 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	TIR4	Q12218	487 aa	Predicted RBP	2.3	□□□□□ -2.04
HAA1	YPR008W	HSP42	Q12329	375 aa		2.3	□□□□□ -2.04
HAA1	YPR008W	FAS1	P07149	2051 aa	Known RBP	2.3	□□□□□ -2.04
HAA1	YPR008W	ADK1	P07170	222 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	PET54	P10834	293 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YCR102C	P25608	368 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	TIP1	P27654	210 aa	Predicted RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	ERG9	P29704	444 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	ERG3	P32353	365 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	REC114	P32841	428 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	not detected
HAA1	YPR008W	PGU1	P47180	361 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YGL204C	P53089	101 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	RMD9	P53140	646 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	ERV29	P53337	310 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	LSM7	P53905	115 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	BNA7	Q04066	261 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	MRX8	Q05473	314 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	MDM30	Q05930	598 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	NMA1	Q06178	401 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	YPR147C	Q06522	304 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	MIM1	Q08176	113 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	GRE1	Q08969	168 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	HMS1	Q12398	434 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YOR032W-A	Q8TGS1	66 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	TEL1	P38110	2787 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YAL064W-B	O13512	126 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	SPS4	P09937	338 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YHR214C-D	P0CX93	97 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	STE18	P18852	110 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	MEK1	P24719	497 aa	Predicted RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	CAM1	P29547	415 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	ERG24	P32462	438 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	HYM1	P32464	399 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	KRE6	P32486	720 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	CLG1	P35190	452 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	HPA3	P39979	161 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	BNA6	P43619	295 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	DIE2	P50076	525 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	YPL039W	Q03080	316 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	TSA2	Q04120	196 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	KEI1	Q06346	221 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	SYC1	Q08553	188 aa	Predicted RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	RDL2	Q08742	149 aa	Known RBP	2.29	□□□□□ -2.04
HAA1	YPR008W	RAX1	Q08760	435 aa		2.29	□□□□□ -2.04
HAA1	YPR008W	MSW1	P04803	379 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	CYC3	P06182	269 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	RIP1	P08067	215 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	MATALPHA1	P0CY06	175 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	HMLALPHA1	P0CY07	175 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	CTA1	P15202	515 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	RNP1	P32385	249 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	ECM25	P32525	599 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	COS9	P36034	407 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	YHR122W	P38829	231 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	SMB1	P40018	196 aa	Known RBP	2.28	□□□□□ -2.04
HAA1	YPR008W	RFC4	P40339	323 aa	Known RBP	2.28	□□□□□ -2.04
HAA1	YPR008W	VHT1	P53241	593 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	MRPS16	Q02608	121 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	AIM36	Q03798	255 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	MIX14	Q04341	121 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	PEX30	Q06169	523 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	CTS2	Q06350	511 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	NIP7	Q08962	181 aa	Known RBP	2.28	□□□□□ -2.04
HAA1	YPR008W	YHR214C-E	Q8TGK0	99 aa		2.28	□□□□□ -2.04
HAA1	YPR008W	TRP1	P00912	224 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SCEI	P03882	235 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	RPL40A	P0CH08	128 aa	Known RBP	2.27	□□□□□ -2.05
HAA1	YPR008W	RPL40B	P0CH09	128 aa	Known RBP	2.27	□□□□□ -2.05
HAA1	YPR008W	UTR1	P21373	530 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	ATG22	P25568	528 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	KRR1	P25586	316 aa	Predicted RBP	2.27	□□□□□ -2.05
HAA1	YPR008W	PPQ1	P32945	549 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SPT10	P35208	640 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	FRM2	P37261	193 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	YBR242W	P38331	238 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SER3	P40054	469 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SYS1	P41544	203 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	ECO1	P43605	281 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	AIM25	P47140	327 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	ASI3	P53983	676 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	PET191	Q02772	108 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SDC1	Q03323	175 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	YDR209C	Q03480	137 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	YDR102C	Q03864	110 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	YMR130W	Q04223	302 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	ASR1	Q06834	288 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	TIM18	Q08749	192 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	MDM32	Q12171	622 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	ORT1	Q12375	292 aa		2.27	□□□□□ -2.05
HAA1	YPR008W	SEN1	Q00416	2231 aa	Known RBP	2.27	□□□□□ -2.05
HAA1	YPR008W	BRR2	P32639	2163 aa	Known RBP	2.27	□□□□□ -2.05
HAA1	YPR008W	SPS2	P08459	502 aa		2.27	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms