RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	BBP1	Q12365	385 aa		1.19	□□□□□ -2.22
RLM1	YPL089C	DSF1	P0CX08	502 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YNR073C	P0CX09	502 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YCR087C-A	P37263	153 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	RPF1	P38805	295 aa	Known RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	FAR7	P43592	221 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	RPA43	P46669	326 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	ABF2	Q02486	183 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YML108W	Q03759	105 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YDR114C	Q04597	100 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	CDD1	Q06549	142 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YOR020W-A	Q3E824	90 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	FCY2	P17064	533 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	RSA4	P25382	515 aa	Known RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	ADE1	P27616	306 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	SPS18	P32572	300 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YPT52	P36018	234 aa	Known RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	YBR063C	P38083	404 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.18	□□□□□ -2.22	not detected
RLM1	YPL089C	FIS1	P40515	155 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	YJR141W	P47172	347 aa	Predicted RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	YGL088W	P53151	121 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	DID2	P69771	204 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	GRH1	Q04410	372 aa	Known RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	FEX1	Q08913	375 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	FEX2	Q08991	375 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	LSO2	Q3E772	92 aa	Known RBP	1.18	□□□□□ -2.22
RLM1	YPL089C	FAB1	P34756	2278 aa		1.18	□□□□□ -2.22
RLM1	YPL089C	DRS2	P39524	1355 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	Q0255	P03881	472 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	DPM1	P14020	267 aa	Known RBP	1.17	□□□□□ -2.22
RLM1	YPL089C	KRE1	P17260	313 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	APS1	P35181	156 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	DOG2	P38773	246 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	DOG1	P38774	246 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	YHR125W	P38831	101 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	ARC15	P40518	154 aa	RIP-Chip data	1.17	□□□□□ -2.22	not detected
RLM1	YPL089C	PET191	Q02772	108 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	YMD8	Q03697	442 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	ATG39	Q06159	398 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	PRM7	Q12459	698 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	SAS5	Q99314	248 aa		1.17	□□□□□ -2.22
RLM1	YPL089C	MIG1	P27705	504 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	ATP7	P30902	174 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	MRPL28	P36527	147 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	ECM33	P38248	429 aa	Known RBP	1.16	□□□□□ -2.22
RLM1	YPL089C	TRM5	P38793	499 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	IRC22	P40006	225 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	YER188W	P40103	239 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	TIF34	P40217	347 aa	Known RBP	1.16	□□□□□ -2.22
RLM1	YPL089C	YMR279C	Q03263	540 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	PEX12	Q04370	399 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	ADH3	P07246	375 aa	Known RBP	1.16	□□□□□ -2.22
RLM1	YPL089C	YHR032W-A	P0C5N6	59 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	CCA1	P21269	546 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	YKR032W	P36127	104 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	YAR068W	P39564	161 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	COG3	P40094	801 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	YJL016W	P47072	561 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	YJR056C	P47115	236 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	MMS2	P53152	137 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	PRM8	P53174	237 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	HOP2	P53187	214 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	CAB4	P53332	305 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	SSU72	P53538	206 aa	Predicted RBP	1.16	□□□□□ -2.22
RLM1	YPL089C	DIA1	P54005	336 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	LPP1	Q04396	274 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	GPM2	Q12008	311 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	TDA8	Q6B2U8	126 aa		1.16	□□□□□ -2.22
RLM1	YPL089C	SEC4	P07560	215 aa	Known RBP	1.15	□□□□□ -2.22
RLM1	YPL089C	YPR170W-B	P0C5R9	85 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	TCA17	P32613	152 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	VMA11	P32842	164 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	SDH4	P37298	181 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	CTR2	P38865	189 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	YER034W	P40022	185 aa	Known RBP	1.15	□□□□□ -2.22
RLM1	YPL089C	SPO73	P40031	143 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	YIL001W	P40560	513 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	SMD3	P43321	101 aa	Known RBP	1.15	□□□□□ -2.22
RLM1	YPL089C	YJL144W	P47009	104 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	YNL010W	P53981	241 aa	Known RBP	1.15	□□□□□ -2.22
RLM1	YPL089C	YHR214C-E	Q8TGK0	99 aa		1.15	□□□□□ -2.22
RLM1	YPL089C	RPL9A	P05738	191 aa	Known RBP	1.15	□□□□□ -2.23
RLM1	YPL089C	CDC7	P06243	507 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	AIM25	P47140	327 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	RPL9B	P51401	191 aa	Known RBP	1.15	□□□□□ -2.23
RLM1	YPL089C	YGR026W	P53217	278 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	YGR050C	P53231	118 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	LSM7	P53905	115 aa	Known RBP	1.15	□□□□□ -2.23
RLM1	YPL089C	GAS3	Q03655	524 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	RDS3	Q06835	107 aa	Predicted RBP	1.15	□□□□□ -2.23
RLM1	YPL089C	YOL160W	Q08321	113 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	YNG1	Q08465	219 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	CLP1	Q08685	445 aa	Predicted RBP	1.15	□□□□□ -2.23
RLM1	YPL089C	MDM32	Q12171	622 aa		1.15	□□□□□ -2.23
RLM1	YPL089C	YPR096C	O13587	100 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	RPL25	P04456	142 aa	Known RBP	1.14	□□□□□ -2.23
RLM1	YPL089C	RPL26A	P05743	127 aa	Known RBP	1.14	□□□□□ -2.23
RLM1	YPL089C	ATG22	P25568	528 aa		1.14	□□□□□ -2.23
RLM1	YPL089C	SCM4	P32564	187 aa		1.14	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms