RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MRX4Q12467 430 aa1.85□□□□□ -2.11
VPS16YPL045W COX5AP00424 153 aa1.84□□□□□ -2.11
VPS16YPL045W FBA1P14540 359 aaKnown RBP1.84□□□□□ -2.11
VPS16YPL045W ERD2P18414 219 aa1.84□□□□□ -2.11
VPS16YPL045W SNF6P18888 332 aa1.84□□□□□ -2.11
VPS16YPL045W SLX9P53251 210 aaPredicted RBP1.84□□□□□ -2.11
VPS16YPL045W PDR17P53844 350 aa1.84□□□□□ -2.11
VPS16YPL045W YNL046WP53956 172 aa1.84□□□□□ -2.11
VPS16YPL045W ECM19Q06011 112 aa1.84□□□□□ -2.11
VPS16YPL045W YOL029CQ08187 201 aa1.84□□□□□ -2.11
VPS16YPL045W HRT3Q12347 344 aa1.84□□□□□ -2.11
VPS16YPL045W DBF2P22204 572 aa1.84□□□□□ -2.12
VPS16YPL045W SPS18P32572 300 aa1.84□□□□□ -2.12
VPS16YPL045W CSG2P35206 410 aa1.84□□□□□ -2.12
VPS16YPL045W GRE3P38715 327 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
VPS16YPL045W POG1P40473 351 aa1.84□□□□□ -2.12
VPS16YPL045W YIP3P53633 176 aa1.84□□□□□ -2.12
VPS16YPL045W MSA1Q08471 629 aa1.84□□□□□ -2.12
VPS16YPL045W SYC1Q08553 188 aaPredicted RBP1.84□□□□□ -2.12
VPS16YPL045W WTM1Q12363 437 aaKnown RBP1.84□□□□□ -2.12
VPS16YPL045W MYO1P08964 1928 aa1.83□□□□□ -2.12
VPS16YPL045W COX4P04037 155 aa1.83□□□□□ -2.12
VPS16YPL045W MET2P08465 486 aa1.83□□□□□ -2.12
VPS16YPL045W ERG2P32352 222 aa1.83□□□□□ -2.12
VPS16YPL045W VPS51P36116 164 aa1.83□□□□□ -2.12
VPS16YPL045W GPI18P38211 433 aa1.83□□□□□ -2.12
VPS16YPL045W PHO89P38361 574 aa1.83□□□□□ -2.12
VPS16YPL045W YPI1P43587 155 aa1.83□□□□□ -2.12
VPS16YPL045W YGL159WP53110 370 aa1.83□□□□□ -2.12
VPS16YPL045W MMS2P53152 137 aa1.83□□□□□ -2.12
VPS16YPL045W YPL150WQ12152 901 aa1.83□□□□□ -2.12
VPS16YPL045W DFM1Q12743 341 aaKnown RBP1.83□□□□□ -2.12
VPS16YPL045W YAL067W-AQ8TGK6 75 aa1.83□□□□□ -2.12
VPS16YPL045W FLO1P32768 1537 aa1.83□□□□□ -2.12
VPS16YPL045W CDC28P00546 298 aaKnown RBP1.83□□□□□ -2.12
VPS16YPL045W YOL163WP0CF20 169 aa1.83□□□□□ -2.12
VPS16YPL045W ISY1P21374 235 aaPredicted RBP1.83□□□□□ -2.12
VPS16YPL045W RPB9P27999 122 aa1.83□□□□□ -2.12
VPS16YPL045W FKS1P38631 1876 aaKnown RBP1.83□□□□□ -2.12
VPS16YPL045W ARN2P38724 620 aa1.83□□□□□ -2.12
VPS16YPL045W EDC2P40023 145 aaPredicted RBP1.83□□□□□ -2.12
VPS16YPL045W RRT13P40042 185 aa1.83□□□□□ -2.12
VPS16YPL045W AVT6P40074 448 aa1.83□□□□□ -2.12
VPS16YPL045W COG3P40094 801 aa1.83□□□□□ -2.12
VPS16YPL045W YJR141WP47172 347 aaPredicted RBP1.83□□□□□ -2.12
VPS16YPL045W YGL118CP53132 145 aa1.83□□□□□ -2.12
VPS16YPL045W IMP4P53941 290 aaKnown RBP1.83□□□□□ -2.12
VPS16YPL045W YML122CQ03207 126 aa1.83□□□□□ -2.12
VPS16YPL045W PRM15Q03262 622 aa1.83□□□□□ -2.12
VPS16YPL045W TLG2Q08144 397 aa1.83□□□□□ -2.12
VPS16YPL045W YNG1Q08465 219 aa1.83□□□□□ -2.12
VPS16YPL045W ATG5Q12380 294 aa1.83□□□□□ -2.12
VPS16YPL045W YBL008W-AQ3E821 79 aa1.83□□□□□ -2.12
VPS16YPL045W YOL085CQ99345 113 aa1.83□□□□□ -2.12
VPS16YPL045W YAK1P14680 807 aa1.82□□□□□ -2.12
VPS16YPL045W EPT1P22140 391 aa1.82□□□□□ -2.12
VPS16YPL045W MRPL27P36526 146 aaPredicted RBP1.82□□□□□ -2.12
VPS16YPL045W MRPL28P36527 147 aa1.82□□□□□ -2.12
VPS16YPL045W YIL054WP40524 105 aa1.82□□□□□ -2.12
VPS16YPL045W MIC19P43594 170 aa1.82□□□□□ -2.12
VPS16YPL045W BXI1P48558 297 aa1.82□□□□□ -2.12
VPS16YPL045W SWT21P53873 357 aaPredicted RBP1.82□□□□□ -2.12
VPS16YPL045W YMR279CQ03263 540 aa1.82□□□□□ -2.12
VPS16YPL045W YDR124WQ04608 324 aa1.82□□□□□ -2.12
VPS16YPL045W YPR011CQ12251 326 aa1.82□□□□□ -2.12
VPS16YPL045W YPS3Q12303 508 aa1.82□□□□□ -2.12
VPS16YPL045W GCN3P14741 305 aa1.81□□□□□ -2.12
VPS16YPL045W OAC1P32332 324 aa1.81□□□□□ -2.12
VPS16YPL045W YHI9P38765 294 aa1.81□□□□□ -2.12
VPS16YPL045W ASP1P38986 381 aaPredicted RBP1.81□□□□□ -2.12
VPS16YPL045W SUR2P38992 349 aa1.81□□□□□ -2.12
VPS16YPL045W YER121WP40076 114 aa1.81□□□□□ -2.12
VPS16YPL045W PEX17P40155 199 aa1.81□□□□□ -2.12
VPS16YPL045W SYS1P41544 203 aa1.81□□□□□ -2.12
VPS16YPL045W YJL016WP47072 561 aa1.81□□□□□ -2.12
VPS16YPL045W YGL262WP53054 175 aa1.81□□□□□ -2.12
VPS16YPL045W SNO1Q03144 224 aa1.81□□□□□ -2.12
VPS16YPL045W GOT1Q03554 138 aa1.81□□□□□ -2.12
VPS16YPL045W YML096WQ04489 525 aa1.81□□□□□ -2.12
VPS16YPL045W YET3Q07451 203 aa1.81□□□□□ -2.12
VPS16YPL045W YHR139C-AO13536 103 aa1.81□□□□□ -2.12
VPS16YPL045W DBP7P36120 742 aaKnown RBP1.81□□□□□ -2.12
VPS16YPL045W YBL081WP38180 368 aaKnown RBP1.81□□□□□ -2.12
VPS16YPL045W SPL2P38839 148 aa1.81□□□□□ -2.12
VPS16YPL045W UFD1P53044 361 aa1.81□□□□□ -2.12
VPS16YPL045W YGR018CP53211 109 aa1.81□□□□□ -2.12
VPS16YPL045W YPL039WQ03080 316 aa1.81□□□□□ -2.12
VPS16YPL045W YDR248CQ03786 193 aa1.81□□□□□ -2.12
VPS16YPL045W USB1Q12208 290 aaKnown RBP1.81□□□□□ -2.12
VPS16YPL045W YBL112CQ3E7Y4 105 aa1.81□□□□□ -2.12
VPS16YPL045W ECM29P38737 1868 aa1.81□□□□□ -2.12
VPS16YPL045W UBC6P33296 250 aaPredicted RBP1.8□□□□□ -2.12
VPS16YPL045W CAF4P36130 643 aa1.8□□□□□ -2.12
VPS16YPL045W SHG1P38337 142 aa1.8□□□□□ -2.12
VPS16YPL045W YJR056CP47115 236 aa1.8□□□□□ -2.12
VPS16YPL045W MRPS16Q02608 121 aa1.8□□□□□ -2.12
VPS16YPL045W PET191Q02772 108 aa1.8□□□□□ -2.12
VPS16YPL045W EMI1Q04406 187 aa1.8□□□□□ -2.12
VPS16YPL045W COX10P21592 462 aa1.8□□□□□ -2.12
VPS16YPL045W FES1P38260 290 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms