RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A PRX1P34227 261 aaKnown RBP1.32□□□□□ -2.2
YOR343W-AYOR343W-A APS1P35181 156 aa1.32□□□□□ -2.2
YOR343W-AYOR343W-A TRM5P38793 499 aa1.32□□□□□ -2.2
YOR343W-AYOR343W-A NUP57P48837 541 aa1.32□□□□□ -2.2
YOR343W-AYOR343W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
YOR343W-AYOR343W-A YLR030WQ07967 263 aa1.32□□□□□ -2.2
YOR343W-AYOR343W-A BOL1Q3E793 110 aa1.32□□□□□ -2.2
YOR343W-AYOR343W-A COX5AP00424 153 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A EHD3P28817 500 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A NTF2P33331 125 aaKnown RBP1.31□□□□□ -2.2
YOR343W-AYOR343W-A RIB1P38066 345 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A YBR096WP38256 230 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A DOG2P38773 246 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A YHR125WP38831 101 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A SVP26P38869 228 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A PEX17P40155 199 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A AYR1P40471 297 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A YGL034CP53186 121 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A YNL010WP53981 241 aaKnown RBP1.31□□□□□ -2.2
YOR343W-AYOR343W-A ABP140Q08641 628 aaKnown RBP1.31□□□□□ -2.2
YOR343W-AYOR343W-A BBP1Q12365 385 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A MHT1Q12525 324 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A ADF1Q2V2Q1 113 aa1.31□□□□□ -2.2
YOR343W-AYOR343W-A SIR4P11978 1358 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A RPL28P02406 149 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A MSW1P04803 379 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A RHO1P06780 209 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A DSF1P0CX08 502 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YNR073CP0CX09 502 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A TCP1P12612 559 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A FBA1P14540 359 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A GRX2P17695 143 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A YMR31P19955 123 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YKT6P36015 200 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A SHE2P36068 246 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
YOR343W-AYOR343W-A SKG1P36169 355 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YBR063CP38083 404 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A URA8P38627 578 aaPredicted RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A IKI1P38874 309 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A RFC4P40339 323 aaKnown RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A ICE2P40499 491 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A CAT5P41735 233 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A RPA43P46669 326 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A BXI1P48558 297 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A ERG25P53045 309 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A MGA1P53050 456 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YGL159WP53110 370 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A CUS2P53830 285 aaPredicted RBP1.3□□□□□ -2.2
YOR343W-AYOR343W-A YDR248CQ03786 193 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YPR011CQ12251 326 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A YLR126CQ12288 251 aa1.3□□□□□ -2.2
YOR343W-AYOR343W-A CDC8P00572 216 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A MATALPHA1P0CY06 175 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A HMLALPHA1P0CY07 175 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A FCY2P17064 533 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A IDH1P28834 360 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
YOR343W-AYOR343W-A TCA17P32613 152 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A SNC2P33328 115 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A PRP18P33411 251 aaPredicted RBP1.29□□□□□ -2.2
YOR343W-AYOR343W-A MRPL28P36527 147 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A ECM33P38248 429 aaKnown RBP1.29□□□□□ -2.2
YOR343W-AYOR343W-A POP4P38336 279 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A YIL001WP40560 513 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A TRM9P49957 279 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A GET1P53192 235 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A RTC4P53850 401 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A NEJ1Q06148 342 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A GET4Q12125 312 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A TSC3Q3E790 80 aa1.29□□□□□ -2.2
YOR343W-AYOR343W-A YDL085C-AQ3E7B7 68 aaKnown RBP1.29□□□□□ -2.2
YOR343W-AYOR343W-A CFT1Q06632 1357 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A RAS2P01120 322 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A RPL25P04456 142 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A CDC33P07260 213 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A SEC4P07560 215 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A URA5P13298 226 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A GCN3P14741 305 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A MRPS28P21771 286 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A ATG22P25568 528 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A PEX4P29340 183 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A MEI4P29467 408 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A SIP3P38717 1229 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A RTC3P38804 111 aaPredicted RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A ERG28P40030 148 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A YKE4P40544 346 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A SMD3P43321 101 aaKnown RBP1.28□□□□□ -2.2
YOR343W-AYOR343W-A YGR219WP53307 113 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A ERV29P53337 310 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A PDR17P53844 350 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A FUS2Q05670 677 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A ATG39Q06159 398 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A YET3Q07451 203 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A MDM32Q12171 622 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A PSF1Q12488 208 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A YKL183C-AQ3E765 70 aa1.28□□□□□ -2.2
YOR343W-AYOR343W-A REP2P03872 296 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A RPL27AP0C2H6 136 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A RPL27BP0C2H7 136 aaKnown RBP1.27□□□□□ -2.21
YOR343W-AYOR343W-A VMA11P32842 164 aa1.27□□□□□ -2.21
YOR343W-AYOR343W-A ECM4P36156 370 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms