RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	NIP7	Q08962	181 aa	Known RBP	2.65	□□□□□ -1.99
CAF20	YOR276W	GRE1	Q08969	168 aa		2.65	□□□□□ -1.99
CAF20	YOR276W	YPL257W	Q08974	193 aa		2.65	□□□□□ -1.99
CAF20	YOR276W	AGC1	Q12482	902 aa		2.65	□□□□□ -1.99
CAF20	YOR276W	SGA1	P08019	549 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	ATP7	P30902	174 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	AGA2	P32781	87 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	FAR7	P43592	221 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	GON7	P46984	123 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	GTR2	P53290	341 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	RSM10	Q03201	203 aa		2.64	□□□□□ -1.99
CAF20	YOR276W	FCY2	P17064	533 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	YPT52	P36018	234 aa	Known RBP	2.63	□□□□□ -1.99
CAF20	YOR276W	BUD13	P46947	266 aa	Predicted RBP	2.63	□□□□□ -1.99
CAF20	YOR276W	PIR5	P46999	287 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	DIA1	P54005	336 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	PET191	Q02772	108 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	GRH1	Q04410	372 aa	Known RBP	2.63	□□□□□ -1.99
CAF20	YOR276W	YDR114C	Q04597	100 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	IES4	Q08561	116 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	YHR214C-E	Q8TGK0	99 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	YIL177C	P40434	1758 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	YJL225C	P40889	1758 aa		2.63	□□□□□ -1.99
CAF20	YOR276W	MRPL28	P36527	147 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	COS8	P38723	381 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	DOG2	P38773	246 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	DOG1	P38774	246 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	RPF1	P38805	295 aa	Known RBP	2.62	□□□□□ -1.99
CAF20	YOR276W	SEC72	P39742	193 aa	Known RBP	2.62	□□□□□ -1.99
CAF20	YOR276W	YER084W	P40057	128 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	RPA43	P46669	326 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	PRM8	P53174	237 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YMR279C	Q03263	540 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YMD8	Q03697	442 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YPR195C	Q06594	109 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YOR268C	Q08734	132 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YDL012C	Q12489	107 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	LSO2	Q3E772	92 aa	Known RBP	2.62	□□□□□ -1.99
CAF20	YOR276W	YOR020W-A	Q3E824	90 aa		2.62	□□□□□ -1.99
CAF20	YOR276W	YPR170W-B	P0C5R9	85 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	YAR068W	P39564	161 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	FIS1	P40515	155 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	OST2	P46964	130 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	YJL016W	P47072	561 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	ABF2	Q02486	183 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	ATG39	Q06159	398 aa		2.61	□□□□□ -1.99
CAF20	YOR276W	QCR6	P00127	147 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	SEC4	P07560	215 aa	Known RBP	2.6	□□□□□ -1.99
CAF20	YOR276W	FMT1	P32785	401 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	PTM1	P32857	523 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	YBR063C	P38083	404 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	ECM33	P38248	429 aa	Known RBP	2.6	□□□□□ -1.99
CAF20	YOR276W	YHR125W	P38831	101 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	COG3	P40094	801 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	ERG10	P41338	398 aa	Known RBP	2.6	□□□□□ -1.99
CAF20	YOR276W	YJR056C	P47115	236 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	AIM25	P47140	327 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	YML108W	Q03759	105 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	YOL160W	Q08321	113 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	FEX1	Q08913	375 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	FEX2	Q08991	375 aa		2.6	□□□□□ -1.99
CAF20	YOR276W	YHR032W-A	P0C5N6	59 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	KSS1	P14681	368 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	TCA17	P32613	152 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	ECM4	P36156	370 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	EGD2	P38879	174 aa	Known RBP	2.59	□□□□□ -1.99
CAF20	YOR276W	IRC22	P40006	225 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	ARC15	P40518	154 aa	RIP-Chip data	2.59	□□□□□ -1.99	not detected
CAF20	YOR276W	LSM7	P53905	115 aa	Known RBP	2.59	□□□□□ -1.99
CAF20	YOR276W	GAS3	Q03655	524 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	LPP1	Q04396	274 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	GIM5	Q04493	163 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	YNG1	Q08465	219 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	MDM32	Q12171	622 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	USB1	Q12208	290 aa	Known RBP	2.59	□□□□□ -1.99
CAF20	YOR276W	TDA8	Q6B2U8	126 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	SAS5	Q99314	248 aa		2.59	□□□□□ -1.99
CAF20	YOR276W	ADH3	P07246	375 aa	Known RBP	2.58	□□□□□ -2
CAF20	YOR276W	KRE1	P17260	313 aa		2.58	□□□□□ -2
CAF20	YOR276W	YKR032W	P36127	104 aa		2.58	□□□□□ -2
CAF20	YOR276W	RMD6	P39975	231 aa		2.58	□□□□□ -2
CAF20	YOR276W	SSU72	P53538	206 aa	Predicted RBP	2.58	□□□□□ -2
CAF20	YOR276W	DID2	P69771	204 aa		2.58	□□□□□ -2
CAF20	YOR276W	SMD2	Q06217	110 aa	Known RBP	2.58	□□□□□ -2
CAF20	YOR276W	CMC2	Q3E7A4	109 aa		2.58	□□□□□ -2
CAF20	YOR276W	Q0255	P03881	472 aa		2.57	□□□□□ -2
CAF20	YOR276W	RPL25	P04456	142 aa	Known RBP	2.57	□□□□□ -2
CAF20	YOR276W	CDC7	P06243	507 aa		2.57	□□□□□ -2
CAF20	YOR276W	MRS1	P07266	363 aa		2.57	□□□□□ -2
CAF20	YOR276W	FBA1	P14540	359 aa	Known RBP	2.57	□□□□□ -2
CAF20	YOR276W	SNF6	P18888	332 aa		2.57	□□□□□ -2
CAF20	YOR276W	CAF4	P36130	643 aa		2.57	□□□□□ -2
CAF20	YOR276W	YER188W	P40103	239 aa		2.57	□□□□□ -2
CAF20	YOR276W	YJR141W	P47172	347 aa	Predicted RBP	2.57	□□□□□ -2
CAF20	YOR276W	SNO1	Q03144	224 aa		2.57	□□□□□ -2
CAF20	YOR276W	PEX12	Q04370	399 aa		2.57	□□□□□ -2
CAF20	YOR276W	IGO2	Q9P305	131 aa		2.57	□□□□□ -2
CAF20	YOR276W	ATG22	P25568	528 aa		2.56	□□□□□ -2
CAF20	YOR276W	POG1	P40473	351 aa		2.56	□□□□□ -2
CAF20	YOR276W	YGR050C	P53231	118 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 128.1 ms