RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W RPN8Q08723 338 aaKnown RBP2.63□□□□□ -1.99
MSH2YOL090W ATP16Q12165 160 aa2.63□□□□□ -1.99
MSH2YOL090W TIR4Q12218 487 aaPredicted RBP2.63□□□□□ -1.99
MSH2YOL090W HRT3Q12347 344 aa2.63□□□□□ -1.99
MSH2YOL090W TCA17P32613 152 aa2.62□□□□□ -1.99
MSH2YOL090W FRM2P37261 193 aa2.62□□□□□ -1.99
MSH2YOL090W VMA22P38784 181 aa2.62□□□□□ -1.99
MSH2YOL090W NVJ1P38881 321 aa2.62□□□□□ -1.99
MSH2YOL090W YIL024CP40543 189 aa2.62□□□□□ -1.99
MSH2YOL090W PSA1P41940 361 aaKnown RBP2.62□□□□□ -1.99
MSH2YOL090W PRM8P53174 237 aa2.62□□□□□ -1.99
MSH2YOL090W COS6P53344 381 aa2.62□□□□□ -1.99
MSH2YOL090W YNL184CP53876 108 aa2.62□□□□□ -1.99
MSH2YOL090W IDP3P53982 420 aaKnown RBP2.62□□□□□ -1.99
MSH2YOL090W YMR254CQ04838 102 aa2.62□□□□□ -1.99
MSH2YOL090W YLR036CQ07986 203 aa2.62□□□□□ -1.99
MSH2YOL090W YOR376WQ08900 122 aa2.62□□□□□ -1.99
MSH2YOL090W THP3Q12049 470 aaKnown RBP2.62□□□□□ -1.99
MSH2YOL090W TRM10Q12400 293 aa2.62□□□□□ -1.99
MSH2YOL090W TRX3P25372 127 aa2.62□□□□□ -1.99
MSH2YOL090W PTI1P39927 425 aaPredicted RBP2.62□□□□□ -1.99
MSH2YOL090W CFD1P40558 293 aa2.62□□□□□ -1.99
MSH2YOL090W SNX4P47057 423 aa2.62□□□□□ -1.99
MSH2YOL090W YJR085CP47131 105 aaKnown RBP2.62□□□□□ -1.99
MSH2YOL090W AIM25P47140 327 aa2.62□□□□□ -1.99
MSH2YOL090W SHY1P53266 389 aa2.62□□□□□ -1.99
MSH2YOL090W YET2Q04210 160 aa2.62□□□□□ -1.99
MSH2YOL090W TFC7Q12415 435 aa2.62□□□□□ -1.99
MSH2YOL090W EAF3Q12432 401 aa2.62□□□□□ -1.99
MSH2YOL090W EFG1Q3E705 233 aaKnown RBP2.62□□□□□ -1.99
MSH2YOL090W SEC1P30619 724 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W TRM7P38238 310 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W YER137CP40083 148 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W YMR144WP40214 342 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W PDS1P40316 373 aaPredicted RBP2.61□□□□□ -1.99
MSH2YOL090W YGR201CP42936 225 aa2.61□□□□□ -1.99
MSH2YOL090W YGL082WP53155 381 aa2.61□□□□□ -1.99
MSH2YOL090W MRH4P53166 561 aa2.61□□□□□ -1.99
MSH2YOL090W HCR1Q05775 265 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W AYT1Q12226 474 aa2.61□□□□□ -1.99
MSH2YOL090W YLR361C-AQ3E795 98 aa2.61□□□□□ -1.99
MSH2YOL090W YFL068WP0CX99 160 aa2.61□□□□□ -1.99
MSH2YOL090W YLL066W-AP0CY00 160 aa2.61□□□□□ -1.99
MSH2YOL090W YLL067W-AP0CY01 160 aa2.61□□□□□ -1.99
MSH2YOL090W CDC43P18898 376 aa2.61□□□□□ -1.99
MSH2YOL090W AAT2P23542 418 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W OAR1P35731 278 aa2.61□□□□□ -1.99
MSH2YOL090W XBP1P40489 647 aa2.61□□□□□ -1.99
MSH2YOL090W RPR2P40571 144 aa2.61□□□□□ -1.99
MSH2YOL090W YFL064CP43540 174 aa2.61□□□□□ -1.99
MSH2YOL090W HST4P53688 370 aa2.61□□□□□ -1.99
MSH2YOL090W AIM34Q03673 198 aa2.61□□□□□ -1.99
MSH2YOL090W INM2Q05533 292 aa2.61□□□□□ -1.99
MSH2YOL090W DTD1Q07648 150 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W RRP40Q08285 240 aaKnown RBP2.61□□□□□ -1.99
MSH2YOL090W YOL160WQ08321 113 aa2.61□□□□□ -1.99
MSH2YOL090W YPR202WQ08993 238 aa2.61□□□□□ -1.99
MSH2YOL090W RIB3Q99258 208 aa2.61□□□□□ -1.99
MSH2YOL090W TRP1P00912 224 aa2.6□□□□□ -1.99
MSH2YOL090W SEC22P22214 214 aa2.6□□□□□ -1.99
MSH2YOL090W CDC50P25656 391 aa2.6□□□□□ -1.99
MSH2YOL090W TRS65P32893 560 aa2.6□□□□□ -1.99
MSH2YOL090W NAT2P37293 288 aa2.6□□□□□ -1.99
MSH2YOL090W ARN2P38724 620 aa2.6□□□□□ -1.99
MSH2YOL090W DOG1P38774 246 aa2.6□□□□□ -1.99
MSH2YOL090W SEN34P39707 275 aa2.6□□□□□ -1.99
MSH2YOL090W YJL213WP40896 331 aa2.6□□□□□ -1.99
MSH2YOL090W CIN5P40917 295 aa2.6□□□□□ -1.99
MSH2YOL090W SWP1Q02795 286 aa2.6□□□□□ -1.99
MSH2YOL090W YPL113CQ02961 396 aa2.6□□□□□ -1.99
MSH2YOL090W ADD37Q03233 198 aa2.6□□□□□ -1.99
MSH2YOL090W YMR010WQ03687 405 aa2.6□□□□□ -1.99
MSH2YOL090W FDH1Q08911 376 aa2.6□□□□□ -1.99
MSH2YOL090W ATX2Q12067 313 aa2.6□□□□□ -1.99
MSH2YOL090W SWI1P09547 1314 aa2.6□□□□□ -1.99
MSH2YOL090W PMU1P36069 295 aa2.6□□□□□ -1.99
MSH2YOL090W LSM4P40070 187 aaKnown RBP2.6□□□□□ -1.99
MSH2YOL090W UFE1P41834 346 aa2.6□□□□□ -1.99
MSH2YOL090W BNS1P50084 137 aa2.6□□□□□ -1.99
MSH2YOL090W FLC3P53121 802 aa2.6□□□□□ -1.99
MSH2YOL090W HNT1Q04344 158 aaKnown RBP2.6□□□□□ -1.99
MSH2YOL090W LIP2Q06005 328 aa2.6□□□□□ -1.99
MSH2YOL090W YPL245WQ12179 454 aaKnown RBP2.6□□□□□ -1.99
MSH2YOL090W ERV2Q12284 196 aa2.6□□□□□ -1.99
MSH2YOL090W YHR214C-EQ8TGK0 99 aa2.6□□□□□ -1.99
MSH2YOL090W APS1P35181 156 aa2.59□□□□□ -1.99
MSH2YOL090W IPI1P38803 334 aaPredicted RBP2.59□□□□□ -1.99
MSH2YOL090W COQ5P49017 307 aa2.59□□□□□ -1.99
MSH2YOL090W SDS23P53172 527 aa2.59□□□□□ -1.99
MSH2YOL090W CWC25P53854 179 aaKnown RBP2.59□□□□□ -1.99
MSH2YOL090W YLR031WQ07978 186 aa2.59□□□□□ -1.99
MSH2YOL090W WIP1Q2V2P8 89 aa2.59□□□□□ -1.99
MSH2YOL090W IDP1P21954 428 aaKnown RBP2.59□□□□□ -1.99
MSH2YOL090W AIM17P23180 465 aaKnown RBP2.59□□□□□ -1.99
MSH2YOL090W CAM1P29547 415 aaKnown RBP2.59□□□□□ -1.99
MSH2YOL090W YGR018CP53211 109 aa2.59□□□□□ -1.99
MSH2YOL090W TMA20P89886 181 aaPredicted RBP2.59□□□□□ -1.99
MSH2YOL090W YDR415CQ04033 374 aaPredicted RBP2.59□□□□□ -1.99
MSH2YOL090W YMR317WQ04893 1140 aa2.59□□□□□ -1.99
MSH2YOL090W AUS1Q08409 1394 aa2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms