RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C RPS16AP0CX51 143 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C RPS16BP0CX52 143 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C TFS1P14306 219 aa2.44□□□□□ -2.02
ATG3YNR007C FBA1P14540 359 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C LHP1P33399 275 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C SRP102P36057 244 aaPredicted RBP2.44□□□□□ -2.02
ATG3YNR007C ADH5P38113 351 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C GPX2P38143 162 aa2.44□□□□□ -2.02
ATG3YNR007C YHK8P38776 514 aa2.44□□□□□ -2.02
ATG3YNR007C TRM5P38793 499 aa2.44□□□□□ -2.02
ATG3YNR007C GEP4P38812 185 aa2.44□□□□□ -2.02
ATG3YNR007C KRE29P40026 464 aa2.44□□□□□ -2.02
ATG3YNR007C YER121WP40076 114 aa2.44□□□□□ -2.02
ATG3YNR007C LCB3P47013 409 aa2.44□□□□□ -2.02
ATG3YNR007C YJR085CP47131 105 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C ADO1P47143 340 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C TOS2P50078 622 aa2.44□□□□□ -2.02
ATG3YNR007C USE1P53146 245 aa2.44□□□□□ -2.02
ATG3YNR007C MST27P53176 234 aa2.44□□□□□ -2.02
ATG3YNR007C MNT4P53745 580 aa2.44□□□□□ -2.02
ATG3YNR007C PRM15Q03262 622 aa2.44□□□□□ -2.02
ATG3YNR007C ABZ2Q03266 374 aa2.44□□□□□ -2.02
ATG3YNR007C GPI17Q04080 534 aa2.44□□□□□ -2.02
ATG3YNR007C YDR391CQ04170 232 aa2.44□□□□□ -2.02
ATG3YNR007C RNH202Q05635 350 aa2.44□□□□□ -2.02
ATG3YNR007C NNT1Q05874 261 aa2.44□□□□□ -2.02
ATG3YNR007C GPI11Q06636 219 aa2.44□□□□□ -2.02
ATG3YNR007C MIM1Q08176 113 aa2.44□□□□□ -2.02
ATG3YNR007C PEX27Q08580 376 aa2.44□□□□□ -2.02
ATG3YNR007C UIP4Q08926 304 aa2.44□□□□□ -2.02
ATG3YNR007C USB1Q12208 290 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C NFI1Q12216 726 aa2.44□□□□□ -2.02
ATG3YNR007C WTM1Q12363 437 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C PCL9Q12477 304 aa2.44□□□□□ -2.02
ATG3YNR007C YOR343CQ12484 108 aa2.44□□□□□ -2.02
ATG3YNR007C YCR024C-BQ3E7Z8 88 aa2.44□□□□□ -2.02
ATG3YNR007C YHR214C-EQ8TGK0 99 aa2.44□□□□□ -2.02
ATG3YNR007C ADH2P00331 348 aaKnown RBP2.43□□□□□ -2.02
ATG3YNR007C YOL162WP0CF19 215 aa2.43□□□□□ -2.02
ATG3YNR007C SNF6P18888 332 aa2.43□□□□□ -2.02
ATG3YNR007C YPK2P18961 677 aa2.43□□□□□ -2.02
ATG3YNR007C PHO80P20052 293 aa2.43□□□□□ -2.02
ATG3YNR007C GIT1P25346 518 aa2.43□□□□□ -2.02
ATG3YNR007C KRR1P25586 316 aaPredicted RBP2.43□□□□□ -2.02
ATG3YNR007C RPS5P26783 225 aaKnown RBP2.43□□□□□ -2.02
ATG3YNR007C RPB9P27999 122 aa2.43□□□□□ -2.02
ATG3YNR007C FUN26P31381 517 aa2.43□□□□□ -2.02
ATG3YNR007C MSK1P32048 576 aa2.43□□□□□ -2.02
ATG3YNR007C SUR1P33300 382 aa2.43□□□□□ -2.02
ATG3YNR007C GDH2P33327 1092 aaKnown RBP2.43□□□□□ -2.02
ATG3YNR007C TIR2P33890 251 aa2.43□□□□□ -2.02
ATG3YNR007C ALP1P38971 573 aa2.43□□□□□ -2.02
ATG3YNR007C YER084WP40057 128 aa2.43□□□□□ -2.02
ATG3YNR007C YFR054CP43622 192 aa2.43□□□□□ -2.02
ATG3YNR007C VMA10P48836 114 aaKnown RBP2.43□□□□□ -2.02
ATG3YNR007C UBC13P52490 153 aa2.43□□□□□ -2.02
ATG3YNR007C NQM1P53228 333 aaPredicted RBP2.43□□□□□ -2.02
ATG3YNR007C YNR062CP53748 327 aa2.43□□□□□ -2.02
ATG3YNR007C TPS1Q00764 495 aaKnown RBP2.43□□□□□ -2.02
ATG3YNR007C TDA1Q03533 586 aa2.43□□□□□ -2.02
ATG3YNR007C BNA7Q04066 261 aa2.43□□□□□ -2.02
ATG3YNR007C CTS2Q06350 511 aa2.43□□□□□ -2.02
ATG3YNR007C SYC1Q08553 188 aaPredicted RBP2.43□□□□□ -2.02
ATG3YNR007C SIA1Q12212 622 aa2.43□□□□□ -2.02
ATG3YNR007C RBD2Q12270 262 aa2.43□□□□□ -2.02
ATG3YNR007C RIB3Q99258 208 aa2.43□□□□□ -2.02
ATG3YNR007C Q0297Q9ZZV8 51 aa2.43□□□□□ -2.02
ATG3YNR007C CCW14O13547 238 aa2.42□□□□□ -2.02
ATG3YNR007C IDH1P28834 360 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
ATG3YNR007C HMX1P32339 317 aa2.42□□□□□ -2.02
ATG3YNR007C MRPL6P32904 214 aa2.42□□□□□ -2.02
ATG3YNR007C VAM7P32912 316 aa2.42□□□□□ -2.02
ATG3YNR007C YKL187CP34231 750 aa2.42□□□□□ -2.02
ATG3YNR007C YKL102CP34249 101 aa2.42□□□□□ -2.02
ATG3YNR007C TMA19P35691 167 aaKnown RBP2.42□□□□□ -2.02
ATG3YNR007C COS9P36034 407 aa2.42□□□□□ -2.02
ATG3YNR007C SKG1P36169 355 aa2.42□□□□□ -2.02
ATG3YNR007C LSM12P38828 187 aaKnown RBP2.42□□□□□ -2.02
ATG3YNR007C HPM1P40481 377 aa2.42□□□□□ -2.02
ATG3YNR007C YHC3P47040 408 aa2.42□□□□□ -2.02
ATG3YNR007C LOH1P47055 219 aa2.42□□□□□ -2.02
ATG3YNR007C EFM3P47163 339 aa2.42□□□□□ -2.02
ATG3YNR007C NRK1P53915 240 aa2.42□□□□□ -2.02
ATG3YNR007C COG5P53951 403 aa2.42□□□□□ -2.02
ATG3YNR007C YPL067CQ02754 198 aa2.42□□□□□ -2.02
ATG3YNR007C YMR315WQ04869 349 aaKnown RBP2.42□□□□□ -2.02
ATG3YNR007C YMR226CQ05016 267 aaKnown RBP2.42□□□□□ -2.02
ATG3YNR007C FIT3Q08907 204 aa2.42□□□□□ -2.02
ATG3YNR007C BTS1Q12051 335 aa2.42□□□□□ -2.02
ATG3YNR007C CDC39P25655 2108 aaKnown RBP2.42□□□□□ -2.02
ATG3YNR007C DSF1P0CX08 502 aa2.41□□□□□ -2.02
ATG3YNR007C YNR073CP0CX09 502 aa2.41□□□□□ -2.02
ATG3YNR007C YAK1P14680 807 aa2.41□□□□□ -2.02
ATG3YNR007C TAL1P15019 335 aaKnown RBP2.41□□□□□ -2.02
ATG3YNR007C FAR1P21268 830 aa2.41□□□□□ -2.02
ATG3YNR007C MRPS28P21771 286 aa2.41□□□□□ -2.02
ATG3YNR007C DAL80P26343 269 aa2.41□□□□□ -2.02
ATG3YNR007C ARC19P33204 171 aaKnown RBP2.41□□□□□ -2.02
ATG3YNR007C ANR2P36090 516 aaPredicted RBP2.41□□□□□ -2.02
ATG3YNR007C RTC2P38279 296 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms