RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W NNT1Q05874 261 aa4.82□□□□□ -1.64
SNN1YNL086W RPL12AP0CX53 165 aaKnown RBP4.81□□□□□ -1.64
SNN1YNL086W RPL12BP0CX54 165 aa4.81□□□□□ -1.64
SNN1YNL086W SAG1P20840 650 aa4.81□□□□□ -1.64
SNN1YNL086W PEX3P28795 441 aa4.81□□□□□ -1.64
SNN1YNL086W IDH1P28834 360 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
SNN1YNL086W ATP3P38077 311 aaKnown RBP4.81□□□□□ -1.64
SNN1YNL086W YER184CP39961 794 aa4.81□□□□□ -1.64
SNN1YNL086W YJL016WP47072 561 aa4.81□□□□□ -1.64
SNN1YNL086W AVT4P50944 713 aa4.81□□□□□ -1.64
SNN1YNL086W RNH201P53942 307 aa4.81□□□□□ -1.64
SNN1YNL086W YOR029WQ12243 111 aa4.81□□□□□ -1.64
SNN1YNL086W OPI3P05375 206 aa4.8□□□□□ -1.64
SNN1YNL086W ALP1P38971 573 aa4.8□□□□□ -1.64
SNN1YNL086W MST28P39552 234 aa4.8□□□□□ -1.64
SNN1YNL086W MPM1P40364 252 aa4.8□□□□□ -1.64
SNN1YNL086W YGR168CP53293 376 aa4.8□□□□□ -1.64
SNN1YNL086W RRN9P53437 365 aa4.8□□□□□ -1.64
SNN1YNL086W YMR166CQ03829 368 aa4.8□□□□□ -1.64
SNN1YNL086W WTM1Q12363 437 aaKnown RBP4.8□□□□□ -1.64
SNN1YNL086W YCR022CP25620 114 aa4.79□□□□□ -1.64
SNN1YNL086W DEG1P31115 442 aaKnown RBP4.79□□□□□ -1.64
SNN1YNL086W HMX1P32339 317 aa4.79□□□□□ -1.64
SNN1YNL086W ASF2P32448 525 aaPredicted RBP4.79□□□□□ -1.64
SNN1YNL086W TCA17P32613 152 aa4.79□□□□□ -1.64
SNN1YNL086W RTC2P38279 296 aa4.79□□□□□ -1.64
SNN1YNL086W RPS20P38701 121 aaKnown RBP4.79□□□□□ -1.64
SNN1YNL086W SNL1P40548 159 aa4.79□□□□□ -1.64
SNN1YNL086W PXR1P53335 271 aaPredicted RBP4.79□□□□□ -1.64
SNN1YNL086W YNL033WP53964 284 aa4.79□□□□□ -1.64
SNN1YNL086W YNL019CP53975 284 aa4.79□□□□□ -1.64
SNN1YNL086W ERV25P54837 211 aaKnown RBP4.79□□□□□ -1.64
SNN1YNL086W YPR098CQ06089 161 aa4.79□□□□□ -1.64
SNN1YNL086W YPL199CQ08954 240 aa4.79□□□□□ -1.64
SNN1YNL086W MHF2Q3E829 80 aa4.79□□□□□ -1.64
SNN1YNL086W SIR2P06700 562 aa4.78□□□□□ -1.64
SNN1YNL086W YHR218WP38899 603 aa4.78□□□□□ -1.64
SNN1YNL086W RMD6P39975 231 aa4.78□□□□□ -1.64
SNN1YNL086W PMT5P52867 743 aa4.78□□□□□ -1.64
SNN1YNL086W CAF40P53829 373 aa4.78□□□□□ -1.64
SNN1YNL086W YMR102CQ03177 834 aa4.78□□□□□ -1.64
SNN1YNL086W GGA1Q06336 557 aa4.78□□□□□ -1.64
SNN1YNL086W TPT1Q12272 230 aaKnown RBP4.78□□□□□ -1.64
SNN1YNL086W YMR105W-AQ8TGS8 64 aa4.78□□□□□ -1.64
SNN1YNL086W TDH3P00359 332 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
SNN1YNL086W ATR1P13090 542 aa4.77□□□□□ -1.65
SNN1YNL086W MEK1P24719 497 aaPredicted RBP4.77□□□□□ -1.65
SNN1YNL086W YCR043CP25361 127 aa4.77□□□□□ -1.65
SNN1YNL086W ATP7P30902 174 aa4.77□□□□□ -1.65
SNN1YNL086W MSK1P32048 576 aa4.77□□□□□ -1.65
SNN1YNL086W YRA2P36036 203 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
SNN1YNL086W SRP102P36057 244 aaPredicted RBP4.77□□□□□ -1.65
SNN1YNL086W SSO2P39926 295 aa4.77□□□□□ -1.65
SNN1YNL086W RTT105P40063 208 aa4.77□□□□□ -1.65
SNN1YNL086W TIR3P40552 269 aa4.77□□□□□ -1.65
SNN1YNL086W STB1P42845 420 aa4.77□□□□□ -1.65
SNN1YNL086W GET1P53192 235 aa4.77□□□□□ -1.65
SNN1YNL086W GPI11Q06636 219 aa4.77□□□□□ -1.65
SNN1YNL086W ASA1Q06822 443 aa4.77□□□□□ -1.65
SNN1YNL086W LDS2Q08218 356 aa4.77□□□□□ -1.65
SNN1YNL086W THP3Q12049 470 aaKnown RBP4.77□□□□□ -1.65
SNN1YNL086W TDH2P00358 332 aaKnown RBP4.76□□□□□ -1.65
SNN1YNL086W TPK3P05986 398 aa4.76□□□□□ -1.65
SNN1YNL086W SNF6P18888 332 aa4.76□□□□□ -1.65
SNN1YNL086W PET18P25362 215 aa4.76□□□□□ -1.65
SNN1YNL086W PUT3P25502 979 aaPredicted RBP4.76□□□□□ -1.65
SNN1YNL086W SUA7P29055 345 aaPredicted RBP4.76□□□□□ -1.65
SNN1YNL086W NTG1P31378 399 aa4.76□□□□□ -1.65
SNN1YNL086W PMU1P36069 295 aa4.76□□□□□ -1.65
SNN1YNL086W YND1P40009 630 aa4.76□□□□□ -1.65
SNN1YNL086W FIP1P45976 327 aa4.76□□□□□ -1.65
SNN1YNL086W RPA43P46669 326 aa4.76□□□□□ -1.65
SNN1YNL086W GON7P46984 123 aa4.76□□□□□ -1.65
SNN1YNL086W PIR5P46999 287 aa4.76□□□□□ -1.65
SNN1YNL086W YGL101WP53144 215 aa4.76□□□□□ -1.65
SNN1YNL086W YMR181CQ03231 154 aa4.76□□□□□ -1.65
SNN1YNL086W ABZ2Q03266 374 aa4.76□□□□□ -1.65
SNN1YNL086W YDR248CQ03786 193 aa4.76□□□□□ -1.65
SNN1YNL086W ERP1Q05359 219 aaKnown RBP4.76□□□□□ -1.65
SNN1YNL086W MRS3P10566 314 aa4.75□□□□□ -1.65
SNN1YNL086W YOX1P34161 385 aa4.75□□□□□ -1.65
SNN1YNL086W SFH5P47008 294 aa4.75□□□□□ -1.65
SNN1YNL086W YGL114WP53134 725 aa4.75□□□□□ -1.65
SNN1YNL086W USE1P53146 245 aa4.75□□□□□ -1.65
SNN1YNL086W AIM36Q03798 255 aa4.75□□□□□ -1.65
SNN1YNL086W MSC3Q05812 728 aa4.75□□□□□ -1.65
SNN1YNL086W AYT1Q12226 474 aa4.75□□□□□ -1.65
SNN1YNL086W YIL002W-AQ3E7Z5 69 aa4.75□□□□□ -1.65
SNN1YNL086W VPS63O13549 108 aa4.74□□□□□ -1.65
SNN1YNL086W SGA1P08019 549 aa4.74□□□□□ -1.65
SNN1YNL086W DPM1P14020 267 aaKnown RBP4.74□□□□□ -1.65
SNN1YNL086W CDC23P16522 626 aa4.74□□□□□ -1.65
SNN1YNL086W HXT2P23585 541 aa4.74□□□□□ -1.65
SNN1YNL086W RIB1P38066 345 aa4.74□□□□□ -1.65
SNN1YNL086W RIB5P38145 238 aa4.74□□□□□ -1.65
SNN1YNL086W FZO1P38297 855 aa4.74□□□□□ -1.65
SNN1YNL086W CUE1P38428 203 aa4.74□□□□□ -1.65
SNN1YNL086W SPR6Q01684 191 aa4.74□□□□□ -1.65
SNN1YNL086W PEX12Q04370 399 aa4.74□□□□□ -1.65
SNN1YNL086W SIA1Q12212 622 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms