RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RPL24BP24000 155 aaKnown RBP1.04□□□□□ -2.24
DDR48YMR173W YCR016WP25617 290 aaKnown RBP1.04□□□□□ -2.24
DDR48YMR173W SSO1P32867 290 aa1.04□□□□□ -2.24
DDR48YMR173W YHR180WP38868 163 aa1.04□□□□□ -2.24
DDR48YMR173W YER085CP40058 173 aa1.04□□□□□ -2.24
DDR48YMR173W GLE2P40066 365 aa1.04□□□□□ -2.24
DDR48YMR173W YMR144WP40214 342 aaKnown RBP1.04□□□□□ -2.24
DDR48YMR173W YKE4P40544 346 aa1.04□□□□□ -2.24
DDR48YMR173W YJR056CP47115 236 aa1.04□□□□□ -2.24
DDR48YMR173W NEJ1Q06148 342 aa1.04□□□□□ -2.24
DDR48YMR173W HEM25Q07534 307 aa1.04□□□□□ -2.24
DDR48YMR173W USB1Q12208 290 aaKnown RBP1.04□□□□□ -2.24
DDR48YMR173W LSO2Q3E772 92 aaKnown RBP1.04□□□□□ -2.24
DDR48YMR173W YOR020W-AQ3E824 90 aa1.04□□□□□ -2.24
DDR48YMR173W BCY1P07278 416 aaKnown RBP1.03□□□□□ -2.24
DDR48YMR173W ECM33P38248 429 aaKnown RBP1.03□□□□□ -2.24
DDR48YMR173W YAR068WP39564 161 aa1.03□□□□□ -2.24
DDR48YMR173W VTC1P40046 129 aaRIP-Chip data1.03□□□□□ -2.24not detected
DDR48YMR173W COX15P40086 486 aa1.03□□□□□ -2.24
DDR48YMR173W YIL001WP40560 513 aa1.03□□□□□ -2.24
DDR48YMR173W CAT5P41735 233 aa1.03□□□□□ -2.24
DDR48YMR173W YRB1P41920 201 aaKnown RBP1.03□□□□□ -2.24
DDR48YMR173W PRM10P42946 383 aa1.03□□□□□ -2.24
DDR48YMR173W MIC26P50087 233 aa1.03□□□□□ -2.24
DDR48YMR173W NSA1P53136 463 aaPredicted RBP1.03□□□□□ -2.24
DDR48YMR173W YLR126CQ12288 251 aa1.03□□□□□ -2.24
DDR48YMR173W UBR2Q07963 1872 aa1.03□□□□□ -2.25
DDR48YMR173W FCY2P17064 533 aa1.02□□□□□ -2.25
DDR48YMR173W VMA6P32366 345 aaKnown RBP1.02□□□□□ -2.25
DDR48YMR173W LDB7P38210 180 aa1.02□□□□□ -2.25
DDR48YMR173W TCD1P38756 429 aa1.02□□□□□ -2.25
DDR48YMR173W OTU1P43558 301 aa1.02□□□□□ -2.25
DDR48YMR173W YJR149WP47177 404 aa1.02□□□□□ -2.25
DDR48YMR173W YNR062CP53748 327 aa1.02□□□□□ -2.25
DDR48YMR173W NOP13P53883 403 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
DDR48YMR173W BUD25P85052 153 aa1.02□□□□□ -2.25
DDR48YMR173W YML096WQ04489 525 aa1.02□□□□□ -2.25
DDR48YMR173W SSQ1Q05931 657 aaPredicted RBP1.02□□□□□ -2.25
DDR48YMR173W TPO4Q12256 659 aa1.02□□□□□ -2.25
DDR48YMR173W YHR139C-AO13536 103 aa1.01□□□□□ -2.25
DDR48YMR173W CDC10P25342 322 aaKnown RBP1.01□□□□□ -2.25
DDR48YMR173W MSN4P33749 630 aa1.01□□□□□ -2.25
DDR48YMR173W RIB1P38066 345 aa1.01□□□□□ -2.25
DDR48YMR173W YBR063CP38083 404 aa1.01□□□□□ -2.25
DDR48YMR173W SVP26P38869 228 aa1.01□□□□□ -2.25
DDR48YMR173W TOS8P53147 276 aa1.01□□□□□ -2.25
DDR48YMR173W FYV6P53913 173 aa1.01□□□□□ -2.25
DDR48YMR173W SEY1Q99287 776 aa1.01□□□□□ -2.25
DDR48YMR173W RPL2AP0CX45 254 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W RPL2BP0CX46 254 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W PET9P18239 318 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W FPR1P20081 114 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W PPA2P28239 310 aa1□□□□□ -2.25
DDR48YMR173W NTF2P33331 125 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W BMH2P34730 273 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W UPS2P35200 230 aa1□□□□□ -2.25
DDR48YMR173W YBR219CP38317 127 aa1□□□□□ -2.25
DDR48YMR173W RTR1P40084 226 aaPredicted RBP1□□□□□ -2.25
DDR48YMR173W AGE2P40529 298 aa1□□□□□ -2.25
DDR48YMR173W FAR7P43592 221 aa1□□□□□ -2.25
DDR48YMR173W BRR6P53062 197 aa1□□□□□ -2.25
DDR48YMR173W PRM8P53174 237 aa1□□□□□ -2.25
DDR48YMR173W YNL010WP53981 241 aaKnown RBP1□□□□□ -2.25
DDR48YMR173W YMD8Q03697 442 aa1□□□□□ -2.25
DDR48YMR173W CDC123Q05791 360 aa1□□□□□ -2.25
DDR48YMR173W THP2O13539 261 aaKnown RBP0.99□□□□□ -2.25
DDR48YMR173W CDC8P00572 216 aa0.99□□□□□ -2.25
DDR48YMR173W YBR121C-AP0C5L4 52 aa0.99□□□□□ -2.25
DDR48YMR173W MATALPHA1P0CY06 175 aa0.99□□□□□ -2.25
DDR48YMR173W HMLALPHA1P0CY07 175 aa0.99□□□□□ -2.25
DDR48YMR173W NHP6BP11633 99 aaKnown RBP0.99□□□□□ -2.25
DDR48YMR173W URA6P15700 204 aa0.99□□□□□ -2.25
DDR48YMR173W PBN1P25580 416 aa0.99□□□□□ -2.25
DDR48YMR173W MEI4P29467 408 aa0.99□□□□□ -2.25
DDR48YMR173W NTG1P31378 399 aa0.99□□□□□ -2.25
DDR48YMR173W URA8P38627 578 aaPredicted RBP0.99□□□□□ -2.25
DDR48YMR173W PEX17P40155 199 aa0.99□□□□□ -2.25
DDR48YMR173W MSS2P40990 351 aa0.99□□□□□ -2.25
DDR48YMR173W RPL33BP41056 107 aaKnown RBP0.99□□□□□ -2.25
DDR48YMR173W IRC18P47056 224 aa0.99□□□□□ -2.25
DDR48YMR173W TRM9P49957 279 aa0.99□□□□□ -2.25
DDR48YMR173W ERV29P53337 310 aa0.99□□□□□ -2.25
DDR48YMR173W PGA2P53903 129 aa0.99□□□□□ -2.25
DDR48YMR173W CWC21Q03375 135 aaKnown RBP0.99□□□□□ -2.25
DDR48YMR173W RNH1Q04740 348 aa0.99□□□□□ -2.25
DDR48YMR173W SML1Q04964 104 aa0.99□□□□□ -2.25
DDR48YMR173W YLR162WQ06235 118 aa0.99□□□□□ -2.25
DDR48YMR173W JIP3O13555 125 aa0.98□□□□□ -2.25
DDR48YMR173W YMR31P19955 123 aa0.98□□□□□ -2.25
DDR48YMR173W RPB4P20433 221 aaPredicted RBP0.98□□□□□ -2.25
DDR48YMR173W DOG2P38773 246 aa0.98□□□□□ -2.25
DDR48YMR173W RPL13BP40212 199 aaKnown RBP0.98□□□□□ -2.25
DDR48YMR173W ICE2P40499 491 aa0.98□□□□□ -2.25
DDR48YMR173W TIR3P40552 269 aa0.98□□□□□ -2.25
DDR48YMR173W NUP57P48837 541 aa0.98□□□□□ -2.25
DDR48YMR173W TRM12Q04235 462 aa0.98□□□□□ -2.25
DDR48YMR173W CSI2Q08054 341 aa0.98□□□□□ -2.25
DDR48YMR173W RIO1Q12196 484 aaKnown RBP0.98□□□□□ -2.25
DDR48YMR173W PSF1Q12488 208 aa0.98□□□□□ -2.25
DDR48YMR173W RPL13AQ12690 199 aaPredicted RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 205.8 ms