RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C SRY1P36007 326 aa4.33□□□□□ -1.72
ATG17YLR423C YPT52P36018 234 aaKnown RBP4.33□□□□□ -1.72
ATG17YLR423C YJL144WP47009 104 aa4.33□□□□□ -1.72
ATG17YLR423C ABF2Q02486 183 aa4.33□□□□□ -1.72
ATG17YLR423C PEX12Q04370 399 aa4.33□□□□□ -1.72
ATG17YLR423C JIP3O13555 125 aa4.32□□□□□ -1.72
ATG17YLR423C RPL27AP0C2H6 136 aaKnown RBP4.32□□□□□ -1.72
ATG17YLR423C RPL27BP0C2H7 136 aaKnown RBP4.32□□□□□ -1.72
ATG17YLR423C RFA3P26755 122 aaKnown RBP4.32□□□□□ -1.72
ATG17YLR423C YHR125WP38831 101 aa4.32□□□□□ -1.72
ATG17YLR423C SPO73P40031 143 aa4.32□□□□□ -1.72
ATG17YLR423C GET1P53192 235 aa4.32□□□□□ -1.72
ATG17YLR423C ATG38Q05789 226 aaKnown RBP4.32□□□□□ -1.72
ATG17YLR423C NIP7Q08962 181 aaKnown RBP4.32□□□□□ -1.72
ATG17YLR423C YPK2P18961 677 aa4.31□□□□□ -1.72
ATG17YLR423C YJL016WP47072 561 aa4.31□□□□□ -1.72
ATG17YLR423C ATG39Q06159 398 aa4.31□□□□□ -1.72
ATG17YLR423C TUS1Q06412 1307 aa4.3□□□□□ -1.72
ATG17YLR423C OAC1P32332 324 aa4.3□□□□□ -1.72
ATG17YLR423C RPF1P38805 295 aaKnown RBP4.3□□□□□ -1.72
ATG17YLR423C TIF34P40217 347 aaKnown RBP4.3□□□□□ -1.72
ATG17YLR423C PDR17P53844 350 aa4.3□□□□□ -1.72
ATG17YLR423C YMR279CQ03263 540 aa4.3□□□□□ -1.72
ATG17YLR423C RAD9P14737 1309 aa4.29□□□□□ -1.72
ATG17YLR423C DPM1P14020 267 aaKnown RBP4.29□□□□□ -1.72
ATG17YLR423C GCN3P14741 305 aa4.29□□□□□ -1.72
ATG17YLR423C SPS18P32572 300 aa4.29□□□□□ -1.72
ATG17YLR423C APS1P35181 156 aa4.29□□□□□ -1.72
ATG17YLR423C DOG2P38773 246 aa4.29□□□□□ -1.72
ATG17YLR423C DOG1P38774 246 aa4.29□□□□□ -1.72
ATG17YLR423C FAR7P43592 221 aa4.29□□□□□ -1.72
ATG17YLR423C YJR056CP47115 236 aa4.29□□□□□ -1.72
ATG17YLR423C CLP1Q08685 445 aaPredicted RBP4.29□□□□□ -1.72
ATG17YLR423C YHR139C-AO13536 103 aa4.28□□□□□ -1.72
ATG17YLR423C VMA11P32842 164 aa4.28□□□□□ -1.72
ATG17YLR423C YBR063CP38083 404 aa4.28□□□□□ -1.72
ATG17YLR423C COG3P40094 801 aa4.28□□□□□ -1.72
ATG17YLR423C BMT5P40493 336 aa4.28□□□□□ -1.72
ATG17YLR423C PRM8P53174 237 aa4.28□□□□□ -1.72
ATG17YLR423C YGR026WP53217 278 aa4.28□□□□□ -1.72
ATG17YLR423C ABP140Q08641 628 aaKnown RBP4.28□□□□□ -1.72
ATG17YLR423C DNA2P38859 1522 aa4.27□□□□□ -1.73
ATG17YLR423C Q0255P03881 472 aa4.27□□□□□ -1.73
ATG17YLR423C YHR032W-AP0C5N6 59 aa4.27□□□□□ -1.73
ATG17YLR423C YPR170W-BP0C5R9 85 aa4.27□□□□□ -1.73
ATG17YLR423C YCR087C-AP37263 153 aa4.27□□□□□ -1.73
ATG17YLR423C SDH4P37298 181 aa4.27□□□□□ -1.73
ATG17YLR423C RPA43P46669 326 aa4.27□□□□□ -1.73
ATG17YLR423C APJ1P53940 528 aa4.27□□□□□ -1.73
ATG17YLR423C RDS3Q06835 107 aaPredicted RBP4.27□□□□□ -1.73
ATG17YLR423C CHD1P32657 1468 aa4.26□□□□□ -1.73
ATG17YLR423C TRM5P38793 499 aa4.26□□□□□ -1.73
ATG17YLR423C YRB2P40517 327 aa4.25□□□□□ -1.73
ATG17YLR423C NOP19P53317 196 aaPredicted RBP4.25□□□□□ -1.73
ATG17YLR423C CCA1P21269 546 aa4.24□□□□□ -1.73
ATG17YLR423C ECM33P38248 429 aaKnown RBP4.24□□□□□ -1.73
ATG17YLR423C DSK2P48510 373 aa4.24□□□□□ -1.73
ATG17YLR423C TLG1Q03322 224 aa4.24□□□□□ -1.73
ATG17YLR423C FAB1P34756 2278 aa4.23□□□□□ -1.73
ATG17YLR423C RPL26AP05743 127 aaKnown RBP4.23□□□□□ -1.73
ATG17YLR423C GRE3P38715 327 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
ATG17YLR423C YHL026CP38740 315 aa4.23□□□□□ -1.73
ATG17YLR423C RPL26BP53221 127 aaKnown RBP4.23□□□□□ -1.73
ATG17YLR423C DID2P69771 204 aa4.23□□□□□ -1.73
ATG17YLR423C SUE1Q06524 206 aa4.23□□□□□ -1.73
ATG17YLR423C MDM32Q12171 622 aa4.23□□□□□ -1.73
ATG17YLR423C QCR7P00128 127 aa4.22□□□□□ -1.73
ATG17YLR423C ATG22P25568 528 aa4.22□□□□□ -1.73
ATG17YLR423C RMD6P39975 231 aa4.22□□□□□ -1.73
ATG17YLR423C MIX17Q03667 156 aa4.22□□□□□ -1.73
ATG17YLR423C LPP1Q04396 274 aa4.22□□□□□ -1.73
ATG17YLR423C HRT1Q08273 121 aa4.22□□□□□ -1.73
ATG17YLR423C AKR2Q12013 749 aa4.22□□□□□ -1.73
ATG17YLR423C MHT1Q12525 324 aa4.22□□□□□ -1.73
ATG17YLR423C YCL012CQ8J0M4 134 aa4.22□□□□□ -1.73
ATG17YLR423C RPL9AP05738 191 aaKnown RBP4.21□□□□□ -1.74
ATG17YLR423C MER1P16523 270 aa4.21□□□□□ -1.74
ATG17YLR423C RPL9BP51401 191 aaKnown RBP4.21□□□□□ -1.74
ATG17YLR423C CAB4P53332 305 aa4.21□□□□□ -1.74
ATG17YLR423C TDA8Q6B2U8 126 aa4.21□□□□□ -1.74
ATG17YLR423C IRC22P40006 225 aa4.2□□□□□ -1.74
ATG17YLR423C YIL001WP40560 513 aa4.2□□□□□ -1.74
ATG17YLR423C SNX4P47057 423 aa4.2□□□□□ -1.74
ATG17YLR423C MMS2P53152 137 aa4.2□□□□□ -1.74
ATG17YLR423C HOP2P53187 214 aa4.2□□□□□ -1.74
ATG17YLR423C SLM2P53955 656 aa4.2□□□□□ -1.74
ATG17YLR423C APA2P22108 325 aa4.19□□□□□ -1.74
ATG17YLR423C SCM4P32564 187 aa4.19□□□□□ -1.74
ATG17YLR423C RSM25P40496 264 aa4.19□□□□□ -1.74
ATG17YLR423C RPL25P04456 142 aaKnown RBP4.18□□□□□ -1.74
ATG17YLR423C SKG1P36169 355 aa4.18□□□□□ -1.74
ATG17YLR423C AST2P39945 430 aaKnown RBP4.18□□□□□ -1.74
ATG17YLR423C YJR146WP47174 117 aa4.18□□□□□ -1.74
ATG17YLR423C GAS3Q03655 524 aa4.18□□□□□ -1.74
ATG17YLR423C CDD1Q06549 142 aa4.18□□□□□ -1.74
ATG17YLR423C KOG1P38873 1557 aa4.18□□□□□ -1.74
ATG17YLR423C PTM1P32857 523 aa4.17□□□□□ -1.74
ATG17YLR423C MRPL28P36527 147 aa4.17□□□□□ -1.74
ATG17YLR423C POP4P38336 279 aa4.17□□□□□ -1.74
ATG17YLR423C MED6P38782 295 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms