RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C NIP7Q08962 181 aaKnown RBP3.71□□□□□ -1.82
YIR043CYIR043C BMT5P40493 336 aa3.7□□□□□ -1.82
YIR043CYIR043C FEX1Q08913 375 aa3.7□□□□□ -1.82
YIR043CYIR043C FEX2Q08991 375 aa3.7□□□□□ -1.82
YIR043CYIR043C YOR020W-AQ3E824 90 aa3.7□□□□□ -1.82
YIR043CYIR043C FCY2P17064 533 aa3.69□□□□□ -1.82
YIR043CYIR043C KRE1P17260 313 aa3.69□□□□□ -1.82
YIR043CYIR043C ASF2P32448 525 aaPredicted RBP3.69□□□□□ -1.82
YIR043CYIR043C FIS1P40515 155 aa3.69□□□□□ -1.82
YIR043CYIR043C YJR141WP47172 347 aaPredicted RBP3.69□□□□□ -1.82
YIR043CYIR043C SNZ1Q03148 297 aa3.69□□□□□ -1.82
YIR043CYIR043C YML108WQ03759 105 aa3.69□□□□□ -1.82
YIR043CYIR043C QCR7P00128 127 aa3.68□□□□□ -1.82
YIR043CYIR043C GCN3P14741 305 aa3.68□□□□□ -1.82
YIR043CYIR043C APS1P35181 156 aa3.68□□□□□ -1.82
YIR043CYIR043C YPT52P36018 234 aaKnown RBP3.68□□□□□ -1.82
YIR043CYIR043C YCR087C-AP37263 153 aa3.68□□□□□ -1.82
YIR043CYIR043C YER188WP40103 239 aa3.68□□□□□ -1.82
YIR043CYIR043C YMD8Q03697 442 aa3.68□□□□□ -1.82
YIR043CYIR043C GRH1Q04410 372 aaKnown RBP3.68□□□□□ -1.82
YIR043CYIR043C LSO2Q3E772 92 aaKnown RBP3.68□□□□□ -1.82
YIR043CYIR043C RPF1P38805 295 aaKnown RBP3.67□□□□□ -1.82
YIR043CYIR043C YAR068WP39564 161 aa3.67□□□□□ -1.82
YIR043CYIR043C FAR7P43592 221 aa3.67□□□□□ -1.82
YIR043CYIR043C YGL088WP53151 121 aa3.67□□□□□ -1.82
YIR043CYIR043C ABF2Q02486 183 aa3.67□□□□□ -1.82
YIR043CYIR043C SAS5Q99314 248 aa3.67□□□□□ -1.82
YIR043CYIR043C FKS1P38631 1876 aaKnown RBP3.67□□□□□ -1.82
YIR043CYIR043C ADH3P07246 375 aaKnown RBP3.66□□□□□ -1.82
YIR043CYIR043C RSA4P25382 515 aaKnown RBP3.66□□□□□ -1.82
YIR043CYIR043C GRE3P38715 327 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
YIR043CYIR043C TRM5P38793 499 aa3.66□□□□□ -1.82
YIR043CYIR043C YHR125WP38831 101 aa3.66□□□□□ -1.82
YIR043CYIR043C ARC15P40518 154 aaRIP-Chip data3.66□□□□□ -1.82not detected
YIR043CYIR043C RPA43P46669 326 aa3.66□□□□□ -1.82
YIR043CYIR043C CDD1Q06549 142 aa3.66□□□□□ -1.82
YIR043CYIR043C MIG1P27705 504 aa3.65□□□□□ -1.83
YIR043CYIR043C YKR032WP36127 104 aa3.65□□□□□ -1.83
YIR043CYIR043C YBR063CP38083 404 aa3.65□□□□□ -1.83
YIR043CYIR043C DOG2P38773 246 aa3.65□□□□□ -1.83
YIR043CYIR043C DOG1P38774 246 aa3.65□□□□□ -1.83
YIR043CYIR043C SSU72P53538 206 aaPredicted RBP3.65□□□□□ -1.83
YIR043CYIR043C PEX12Q04370 399 aa3.65□□□□□ -1.83
YIR043CYIR043C ATG39Q06159 398 aa3.65□□□□□ -1.83
YIR043CYIR043C PRM8P53174 237 aa3.64□□□□□ -1.83
YIR043CYIR043C Q0255P03881 472 aa3.63□□□□□ -1.83
YIR043CYIR043C YHR032W-AP0C5N6 59 aa3.63□□□□□ -1.83
YIR043CYIR043C YPR170W-BP0C5R9 85 aa3.63□□□□□ -1.83
YIR043CYIR043C DPM1P14020 267 aaKnown RBP3.63□□□□□ -1.83
YIR043CYIR043C ADE1P27616 306 aa3.63□□□□□ -1.83
YIR043CYIR043C YJR056CP47115 236 aa3.63□□□□□ -1.83
YIR043CYIR043C HOP2P53187 214 aa3.63□□□□□ -1.83
YIR043CYIR043C ECM33P38248 429 aaKnown RBP3.62□□□□□ -1.83
YIR043CYIR043C TIF34P40217 347 aaKnown RBP3.62□□□□□ -1.83
YIR043CYIR043C YJL016WP47072 561 aa3.62□□□□□ -1.83
YIR043CYIR043C GPM2Q12008 311 aa3.62□□□□□ -1.83
YIR043CYIR043C YPR096CO13587 100 aa3.61□□□□□ -1.83
YIR043CYIR043C SPO73P40031 143 aa3.61□□□□□ -1.83
YIR043CYIR043C YJL144WP47009 104 aa3.61□□□□□ -1.83
YIR043CYIR043C MMS2P53152 137 aa3.61□□□□□ -1.83
YIR043CYIR043C DID2P69771 204 aa3.61□□□□□ -1.83
YIR043CYIR043C PET191Q02772 108 aa3.61□□□□□ -1.83
YIR043CYIR043C YMR279CQ03263 540 aa3.61□□□□□ -1.83
YIR043CYIR043C LPP1Q04396 274 aa3.61□□□□□ -1.83
YIR043CYIR043C TDA8Q6B2U8 126 aa3.61□□□□□ -1.83
YIR043CYIR043C YHR214C-EQ8TGK0 99 aa3.61□□□□□ -1.83
YIR043CYIR043C MRPL28P36527 147 aa3.6□□□□□ -1.83
YIR043CYIR043C SDH4P37298 181 aa3.6□□□□□ -1.83
YIR043CYIR043C IRC22P40006 225 aa3.6□□□□□ -1.83
YIR043CYIR043C COG3P40094 801 aa3.6□□□□□ -1.83
YIR043CYIR043C CAB4P53332 305 aa3.6□□□□□ -1.83
YIR043CYIR043C RDS3Q06835 107 aaPredicted RBP3.6□□□□□ -1.83
YIR043CYIR043C MDM32Q12171 622 aa3.6□□□□□ -1.83
YIR043CYIR043C VMA11P32842 164 aa3.59□□□□□ -1.83
YIR043CYIR043C PTM1P32857 523 aa3.59□□□□□ -1.83
YIR043CYIR043C RMD6P39975 231 aa3.59□□□□□ -1.83
YIR043CYIR043C YGR026WP53217 278 aa3.59□□□□□ -1.83
YIR043CYIR043C GAS3Q03655 524 aa3.59□□□□□ -1.83
YIR043CYIR043C CLP1Q08685 445 aaPredicted RBP3.59□□□□□ -1.83
YIR043CYIR043C SEC4P07560 215 aaKnown RBP3.58□□□□□ -1.84
YIR043CYIR043C ATG22P25568 528 aa3.58□□□□□ -1.84
YIR043CYIR043C TCA17P32613 152 aa3.58□□□□□ -1.84
YIR043CYIR043C YIL001WP40560 513 aa3.58□□□□□ -1.84
YIR043CYIR043C CCA1P21269 546 aa3.57□□□□□ -1.84
YIR043CYIR043C ATP7P30902 174 aa3.57□□□□□ -1.84
YIR043CYIR043C SMD3P43321 101 aaKnown RBP3.57□□□□□ -1.84
YIR043CYIR043C AIM25P47140 327 aa3.57□□□□□ -1.84
YIR043CYIR043C DSK2P48510 373 aa3.57□□□□□ -1.84
YIR043CYIR043C LSM7P53905 115 aaKnown RBP3.57□□□□□ -1.84
YIR043CYIR043C YNL010WP53981 241 aaKnown RBP3.57□□□□□ -1.84
YIR043CYIR043C AKR2Q12013 749 aa3.57□□□□□ -1.84
YIR043CYIR043C RPL25P04456 142 aaKnown RBP3.56□□□□□ -1.84
YIR043CYIR043C YER034WP40022 185 aaKnown RBP3.56□□□□□ -1.84
YIR043CYIR043C YOL160WQ08321 113 aa3.56□□□□□ -1.84
YIR043CYIR043C RPL9AP05738 191 aaKnown RBP3.55□□□□□ -1.84
YIR043CYIR043C RPL26AP05743 127 aaKnown RBP3.55□□□□□ -1.84
YIR043CYIR043C CDC7P06243 507 aa3.55□□□□□ -1.84
YIR043CYIR043C POP4P38336 279 aa3.55□□□□□ -1.84
YIR043CYIR043C YHL026CP38740 315 aa3.55□□□□□ -1.84
YIR043CYIR043C CTR2P38865 189 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms