RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W GPP1P41277 250 aaKnown RBP9.67□□□□□ -0.86
SIM1YIL123W YHC3P47040 408 aa9.67□□□□□ -0.86
SIM1YIL123W FIT3Q08907 204 aa9.67□□□□□ -0.86
SIM1YIL123W YLR108CQ12259 485 aa9.67□□□□□ -0.86
SIM1YIL123W RPL13AQ12690 199 aaPredicted RBP9.67□□□□□ -0.86
SIM1YIL123W RPL25P04456 142 aaKnown RBP9.66□□□□□ -0.86
SIM1YIL123W RPP1AP05318 106 aaPredicted RBP9.66□□□□□ -0.86
SIM1YIL123W CKA1P15790 372 aa9.66□□□□□ -0.86
SIM1YIL123W VMA8P32610 256 aaKnown RBP9.66□□□□□ -0.86
SIM1YIL123W POP2P39008 433 aa9.66□□□□□ -0.86
SIM1YIL123W YIL029CP40538 142 aa9.66□□□□□ -0.86
SIM1YIL123W YIP5P53108 310 aa9.66□□□□□ -0.86
SIM1YIL123W INN1P53901 409 aa9.66□□□□□ -0.86
SIM1YIL123W YPR098CQ06089 161 aa9.66□□□□□ -0.86
SIM1YIL123W RRT7Q07829 113 aa9.66□□□□□ -0.86
SIM1YIL123W NCE102Q12207 173 aaRIP-Chip data9.66□□□□□ -0.86not detected
SIM1YIL123W REP2P03872 296 aa9.65□□□□□ -0.86
SIM1YIL123W FUS3P16892 353 aaKnown RBP9.65□□□□□ -0.86
SIM1YIL123W OLE1P21147 510 aaKnown RBP9.65□□□□□ -0.86
SIM1YIL123W VMA3P25515 160 aa9.65□□□□□ -0.86
SIM1YIL123W EDS1P38073 919 aa9.65□□□□□ -0.86
SIM1YIL123W LSM12P38828 187 aaKnown RBP9.65□□□□□ -0.86
SIM1YIL123W YER079WP40052 210 aaKnown RBP9.65□□□□□ -0.86
SIM1YIL123W FLX1P40464 311 aa9.65□□□□□ -0.86
SIM1YIL123W SRB7P47822 140 aa9.65□□□□□ -0.86
SIM1YIL123W SOL1P50278 321 aa9.65□□□□□ -0.86
SIM1YIL123W YDR286CQ05530 114 aa9.65□□□□□ -0.86
SIM1YIL123W RRS1Q08746 203 aaKnown RBP9.65□□□□□ -0.86
SIM1YIL123W MET3P08536 511 aa9.65□□□□□ -0.87
SIM1YIL123W RPD3P32561 433 aa9.65□□□□□ -0.87
SIM1YIL123W SWD2P36104 329 aaPredicted RBP9.65□□□□□ -0.87
SIM1YIL123W PRS2P38620 318 aaKnown RBP9.65□□□□□ -0.87
SIM1YIL123W IRC24P40580 263 aa9.65□□□□□ -0.87
SIM1YIL123W RPA34P47006 233 aaPredicted RBP9.65□□□□□ -0.87
SIM1YIL123W MRX5P47007 382 aa9.65□□□□□ -0.87
SIM1YIL123W YGL117WP53133 265 aa9.65□□□□□ -0.87
SIM1YIL123W SLX9P53251 210 aaPredicted RBP9.65□□□□□ -0.87
SIM1YIL123W PIN3Q06449 215 aa9.65□□□□□ -0.87
SIM1YIL123W YLR146W-AQ2V2P1 62 aa9.65□□□□□ -0.87
SIM1YIL123W HEM4P06174 275 aa9.64□□□□□ -0.87
SIM1YIL123W SSA3P09435 649 aaKnown RBP9.64□□□□□ -0.87
SIM1YIL123W RPB7P34087 171 aa9.64□□□□□ -0.87
SIM1YIL123W XBP1P40489 647 aa9.64□□□□□ -0.87
SIM1YIL123W HNT2P49775 206 aa9.64□□□□□ -0.87
SIM1YIL123W SIP18P50263 79 aa9.64□□□□□ -0.87
SIM1YIL123W RPL35AP0CX84 120 aaKnown RBP9.63□□□□□ -0.87
SIM1YIL123W RPL35BP0CX85 120 aaKnown RBP9.63□□□□□ -0.87
SIM1YIL123W PRM5P40476 318 aa9.63□□□□□ -0.87
SIM1YIL123W EGT2P42835 1041 aa9.63□□□□□ -0.87
SIM1YIL123W BUL1P48524 976 aa9.63□□□□□ -0.87
SIM1YIL123W GPI15P53961 229 aa9.63□□□□□ -0.87
SIM1YIL123W TIM11P81449 96 aaPredicted RBP9.63□□□□□ -0.87
SIM1YIL123W EST3Q03096 181 aa9.63□□□□□ -0.87
SIM1YIL123W YML108WQ03759 105 aa9.63□□□□□ -0.87
SIM1YIL123W YMR254CQ04838 102 aa9.63□□□□□ -0.87
SIM1YIL123W BER1Q06688 274 aaKnown RBP9.63□□□□□ -0.87
SIM1YIL123W FRE8Q12209 686 aa9.63□□□□□ -0.87
SIM1YIL123W MPD1Q12404 318 aaKnown RBP9.63□□□□□ -0.87
SIM1YIL123W FOL3Q12676 427 aaPredicted RBP9.63□□□□□ -0.87
SIM1YIL123W YPR108W-AQ3E7B3 70 aa9.63□□□□□ -0.87
SIM1YIL123W CLB6P32943 380 aa9.62□□□□□ -0.87
SIM1YIL123W LNP1P38878 278 aa9.62□□□□□ -0.87
SIM1YIL123W PHO23P50947 330 aa9.62□□□□□ -0.87
SIM1YIL123W MEH1Q02205 184 aa9.62□□□□□ -0.87
SIM1YIL123W VPS28Q02767 242 aa9.62□□□□□ -0.87
SIM1YIL123W WHI5Q12416 295 aa9.62□□□□□ -0.87
SIM1YIL123W IMP1P28627 190 aa9.61□□□□□ -0.87
SIM1YIL123W SWD3P38123 315 aa9.61□□□□□ -0.87
SIM1YIL123W AGX1P43567 385 aa9.61□□□□□ -0.87
SIM1YIL123W MRPL22P53881 309 aa9.61□□□□□ -0.87
SIM1YIL123W YDC1Q02896 317 aa9.61□□□□□ -0.87
SIM1YIL123W CAC2Q04199 468 aa9.61□□□□□ -0.87
SIM1YIL123W ERP1Q05359 219 aaKnown RBP9.61□□□□□ -0.87
SIM1YIL123W UBI4P0CG63 381 aaKnown RBP9.6□□□□□ -0.87
SIM1YIL123W YUH1P35127 236 aa9.6□□□□□ -0.87
SIM1YIL123W NTC20P38302 140 aaPredicted RBP9.6□□□□□ -0.87
SIM1YIL123W YEA6P39953 335 aa9.6□□□□□ -0.87
SIM1YIL123W PIG2P40187 538 aa9.6□□□□□ -0.87
SIM1YIL123W PKP2P53170 491 aa9.6□□□□□ -0.87
SIM1YIL123W ATG40Q99325 256 aa9.6□□□□□ -0.87
SIM1YIL123W ERG2P32352 222 aa9.59□□□□□ -0.87
SIM1YIL123W MNS1P32906 549 aa9.59□□□□□ -0.87
SIM1YIL123W ERV15P38312 142 aa9.59□□□□□ -0.87
SIM1YIL123W PAC2P39937 518 aa9.59□□□□□ -0.87
SIM1YIL123W YPL077CQ02831 240 aa9.59□□□□□ -0.87
SIM1YIL123W ODC1Q03028 310 aa9.59□□□□□ -0.87
SIM1YIL123W UPS1Q05776 175 aa9.59□□□□□ -0.87
SIM1YIL123W FCF2Q12035 217 aaPredicted RBP9.59□□□□□ -0.87
SIM1YIL123W CBT1P36038 271 aaPredicted RBP9.58□□□□□ -0.88
SIM1YIL123W GPI16P38875 610 aa9.58□□□□□ -0.88
SIM1YIL123W SEN34P39707 275 aa9.58□□□□□ -0.88
SIM1YIL123W TAF4P50105 388 aa9.58□□□□□ -0.88
SIM1YIL123W SUR7P54003 302 aa9.58□□□□□ -0.88
SIM1YIL123W YDL218WQ07629 317 aa9.58□□□□□ -0.88
SIM1YIL123W YOL029CQ08187 201 aa9.58□□□□□ -0.88
SIM1YIL123W YHR213W-AQ8TGT4 77 aa9.58□□□□□ -0.88
SIM1YIL123W ZRC1P20107 442 aa9.57□□□□□ -0.88
SIM1YIL123W SNN1P48232 102 aa9.57□□□□□ -0.88
SIM1YIL123W YIF1P53845 314 aaKnown RBP9.57□□□□□ -0.88
SIM1YIL123W API2Q04413 109 aa9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 107 ms