RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YPR063CQ12160 140 aa4.37□□□□□ -1.71
MSH1YHR120W MRPS5P33759 307 aa4.37□□□□□ -1.71
MSH1YHR120W PAN3P36102 679 aaPredicted RBP4.37□□□□□ -1.71
MSH1YHR120W SHM2P37291 469 aaKnown RBP4.37□□□□□ -1.71
MSH1YHR120W SPC25P40014 221 aa4.37□□□□□ -1.71
MSH1YHR120W MOB2P43563 287 aa4.37□□□□□ -1.71
MSH1YHR120W YHC3P47040 408 aa4.37□□□□□ -1.71
MSH1YHR120W BXI1P48558 297 aa4.37□□□□□ -1.71
MSH1YHR120W YGL117WP53133 265 aa4.37□□□□□ -1.71
MSH1YHR120W SAM50P53969 484 aa4.37□□□□□ -1.71
MSH1YHR120W RCE1Q03530 315 aa4.37□□□□□ -1.71
MSH1YHR120W RVB1Q03940 463 aaKnown RBP4.37□□□□□ -1.71
MSH1YHR120W BNA7Q04066 261 aa4.37□□□□□ -1.71
MSH1YHR120W HNT1Q04344 158 aaKnown RBP4.37□□□□□ -1.71
MSH1YHR120W CMC2Q3E7A4 109 aa4.37□□□□□ -1.71
MSH1YHR120W ERG4P25340 473 aa4.36□□□□□ -1.71
MSH1YHR120W SLZ1P40167 298 aa4.36□□□□□ -1.71
MSH1YHR120W NIT3P49954 291 aa4.36□□□□□ -1.71
MSH1YHR120W MCT1Q12283 360 aa4.36□□□□□ -1.71
MSH1YHR120W TPI1P00942 248 aaKnown RBP4.36□□□□□ -1.71
MSH1YHR120W RPS16AP0CX51 143 aaKnown RBP4.36□□□□□ -1.71
MSH1YHR120W RPS16BP0CX52 143 aaKnown RBP4.36□□□□□ -1.71
MSH1YHR120W MSK1P32048 576 aa4.36□□□□□ -1.71
MSH1YHR120W YER084WP40057 128 aa4.36□□□□□ -1.71
MSH1YHR120W EMC5P40540 141 aa4.36□□□□□ -1.71
MSH1YHR120W QRI1P43123 477 aaKnown RBP4.36□□□□□ -1.71
MSH1YHR120W MOG1P47123 218 aa4.36□□□□□ -1.71
MSH1YHR120W ACS1Q01574 713 aa4.36□□□□□ -1.71
MSH1YHR120W YDL086WQ07505 273 aa4.36□□□□□ -1.71
MSH1YHR120W YJR112W-AQ3E743 109 aa4.36□□□□□ -1.71
MSH1YHR120W RPS13P05756 151 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W NAM2P11325 894 aa4.35□□□□□ -1.71
MSH1YHR120W CLB6P32943 380 aa4.35□□□□□ -1.71
MSH1YHR120W MIA40P36046 403 aa4.35□□□□□ -1.71
MSH1YHR120W GAT2P40209 560 aa4.35□□□□□ -1.71
MSH1YHR120W SOL1P50278 321 aa4.35□□□□□ -1.71
MSH1YHR120W YGR026WP53217 278 aa4.35□□□□□ -1.71
MSH1YHR120W YNL165WP53891 406 aa4.35□□□□□ -1.71
MSH1YHR120W MCH4Q08268 501 aa4.35□□□□□ -1.71
MSH1YHR120W SCP1Q08873 200 aa4.35□□□□□ -1.71
MSH1YHR120W SRL2Q12020 392 aa4.35□□□□□ -1.71
MSH1YHR120W COX19Q3E731 98 aa4.35□□□□□ -1.71
MSH1YHR120W CPR2P23285 205 aa4.35□□□□□ -1.71
MSH1YHR120W SED4P25365 1065 aa4.35□□□□□ -1.71
MSH1YHR120W SSH1P38353 490 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W DLS1P40366 167 aa4.35□□□□□ -1.71
MSH1YHR120W ERJ5P43613 295 aaPredicted RBP4.35□□□□□ -1.71
MSH1YHR120W SIP18P50263 79 aa4.35□□□□□ -1.71
MSH1YHR120W MRPL22P53881 309 aa4.35□□□□□ -1.71
MSH1YHR120W AAH1P53909 347 aa4.35□□□□□ -1.71
MSH1YHR120W MRPS17Q03246 237 aaPredicted RBP4.35□□□□□ -1.71
MSH1YHR120W YMR279CQ03263 540 aa4.35□□□□□ -1.71
MSH1YHR120W FIT1Q04433 528 aa4.35□□□□□ -1.71
MSH1YHR120W AIM45Q12480 344 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W QCR2P07257 368 aa4.35□□□□□ -1.71
MSH1YHR120W YML003WP0CF16 290 aa4.35□□□□□ -1.71
MSH1YHR120W RFA3P26755 122 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W ARO4P32449 370 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W ATP3P38077 311 aaKnown RBP4.35□□□□□ -1.71
MSH1YHR120W POP8P38208 133 aa4.35□□□□□ -1.71
MSH1YHR120W ERV15P38312 142 aa4.35□□□□□ -1.71
MSH1YHR120W YIR035CP40579 254 aa4.35□□□□□ -1.71
MSH1YHR120W SNO1Q03144 224 aa4.35□□□□□ -1.71
MSH1YHR120W CAB5Q03941 241 aa4.35□□□□□ -1.71
MSH1YHR120W DGK1Q12382 290 aa4.35□□□□□ -1.71
MSH1YHR120W TY1A-DR4O74302 440 aa4.34□□□□□ -1.71
MSH1YHR120W GAL1P04385 528 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-AP0CX57 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-PR1P0CX58 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-ORP0CX59 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-PR2P0CX60 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-DR5P0CX65 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-ER2P0CX66 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-GR3P0CX67 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-LR1P0CX68 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-MR2P0CX69 440 aa4.34□□□□□ -1.71
MSH1YHR120W MIR1P23641 311 aaKnown RBP4.34□□□□□ -1.71
MSH1YHR120W TIP1P27654 210 aaPredicted RBP4.34□□□□□ -1.71
MSH1YHR120W VMA5P31412 392 aaKnown RBP4.34□□□□□ -1.71
MSH1YHR120W RPS0AP32905 252 aaKnown RBP4.34□□□□□ -1.71
MSH1YHR120W VAM7P32912 316 aa4.34□□□□□ -1.71
MSH1YHR120W YBR220CP38318 560 aa4.34□□□□□ -1.71
MSH1YHR120W LSM8P47093 109 aaKnown RBP4.34□□□□□ -1.71
MSH1YHR120W TY1A-JR2P47099 440 aa4.34□□□□□ -1.71
MSH1YHR120W TIM21P53220 239 aa4.34□□□□□ -1.71
MSH1YHR120W PET191Q02772 108 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-DR1Q03856 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-ML1Q04706 440 aaKnown RBP4.34□□□□□ -1.71
MSH1YHR120W TY1A-BRQ12217 440 aa4.34□□□□□ -1.71
MSH1YHR120W YCT1Q12235 531 aa4.34□□□□□ -1.71
MSH1YHR120W IZH2Q12442 317 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-NL2Q12470 440 aa4.34□□□□□ -1.71
MSH1YHR120W TY1A-GR2Q12485 440 aa4.34□□□□□ -1.71
MSH1YHR120W SCEIP03882 235 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-LR4P0C2I8 440 aaKnown RBP4.34□□□□□ -1.72
MSH1YHR120W TY1A-DR6P0CX70 440 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-ER1P0CX71 440 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-LR2P0CX72 440 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-PLP0CX73 440 aa4.34□□□□□ -1.72
MSH1YHR120W TY1A-JR1P0CX74 440 aa4.34□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms