RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W PRM4Q12498 284 aa3.52□□□□□ -1.85
UBP6YFR010W YPL229WQ99395 206 aa3.52□□□□□ -1.85
UBP6YFR010W RPN13O13563 156 aa3.51□□□□□ -1.85
UBP6YFR010W ADK1P07170 222 aaKnown RBP3.51□□□□□ -1.85
UBP6YFR010W PHO2P07269 559 aa3.51□□□□□ -1.85
UBP6YFR010W YGL041W-AP0C5N3 154 aa3.51□□□□□ -1.85
UBP6YFR010W MAK32P23060 363 aa3.51□□□□□ -1.85
UBP6YFR010W CNB1P25296 175 aa3.51□□□□□ -1.85
UBP6YFR010W ATG22P25568 528 aa3.51□□□□□ -1.85
UBP6YFR010W RPC19P28000 142 aaKnown RBP3.51□□□□□ -1.85
UBP6YFR010W PMU1P36069 295 aa3.51□□□□□ -1.85
UBP6YFR010W LEU5P38702 357 aa3.51□□□□□ -1.85
UBP6YFR010W ARN1P38731 627 aa3.51□□□□□ -1.85
UBP6YFR010W AIM18P38884 321 aa3.51□□□□□ -1.85
UBP6YFR010W CHL4P38907 458 aa3.51□□□□□ -1.85
UBP6YFR010W APQ12P40532 138 aa3.51□□□□□ -1.85
UBP6YFR010W YGL101WP53144 215 aa3.51□□□□□ -1.85
UBP6YFR010W SLM2P53955 656 aa3.51□□□□□ -1.85
UBP6YFR010W TMA23Q03525 211 aa3.51□□□□□ -1.85
UBP6YFR010W YML018CQ03730 393 aa3.51□□□□□ -1.85
UBP6YFR010W YAP7Q08182 245 aa3.51□□□□□ -1.85
UBP6YFR010W THI20Q08224 551 aa3.51□□□□□ -1.85
UBP6YFR010W FSF1Q12029 327 aaKnown RBP3.51□□□□□ -1.85
UBP6YFR010W TFC7Q12415 435 aa3.51□□□□□ -1.85
UBP6YFR010W DRS2P39524 1355 aa3.5□□□□□ -1.85
UBP6YFR010W IPP1P00817 287 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W YAR066WP0CX18 203 aa3.5□□□□□ -1.85
UBP6YFR010W YHR214WP0CX19 203 aa3.5□□□□□ -1.85
UBP6YFR010W SNF4P12904 322 aa3.5□□□□□ -1.85
UBP6YFR010W PCL1P24867 279 aa3.5□□□□□ -1.85
UBP6YFR010W TIP1P27654 210 aaPredicted RBP3.5□□□□□ -1.85
UBP6YFR010W YNK1P36010 153 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W MRP21P38175 177 aa3.5□□□□□ -1.85
UBP6YFR010W YPT31P38555 223 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W ARN2P38724 620 aa3.5□□□□□ -1.85
UBP6YFR010W LSM12P38828 187 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W PEX17P40155 199 aa3.5□□□□□ -1.85
UBP6YFR010W SDT1P53078 280 aa3.5□□□□□ -1.85
UBP6YFR010W LSM7P53905 115 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W LSM3P57743 89 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W HHT1P61830 136 aa3.5□□□□□ -1.85
UBP6YFR010W NHP10Q03435 203 aa3.5□□□□□ -1.85
UBP6YFR010W GMC1Q04399 608 aa3.5□□□□□ -1.85
UBP6YFR010W ERP1Q05359 219 aaKnown RBP3.5□□□□□ -1.85
UBP6YFR010W YDL218WQ07629 317 aa3.5□□□□□ -1.85
UBP6YFR010W OSW1Q08692 278 aa3.5□□□□□ -1.85
UBP6YFR010W YNL162W-AQ3E7A8 72 aa3.5□□□□□ -1.85
UBP6YFR010W REV3P14284 1504 aa3.5□□□□□ -1.85
UBP6YFR010W MSI1P13712 422 aa3.49□□□□□ -1.85
UBP6YFR010W YCR100CP25606 316 aa3.49□□□□□ -1.85
UBP6YFR010W TRS65P32893 560 aa3.49□□□□□ -1.85
UBP6YFR010W YKL102CP34249 101 aa3.49□□□□□ -1.85
UBP6YFR010W NAT2P37293 288 aa3.49□□□□□ -1.85
UBP6YFR010W MIT1P40002 666 aa3.49□□□□□ -1.85
UBP6YFR010W HMF1P40037 129 aaKnown RBP3.49□□□□□ -1.85
UBP6YFR010W GVP36P40531 326 aaKnown RBP3.49□□□□□ -1.85
UBP6YFR010W MIC19P43594 170 aa3.49□□□□□ -1.85
UBP6YFR010W RPA43P46669 326 aa3.49□□□□□ -1.85
UBP6YFR010W BUD13P46947 266 aaPredicted RBP3.49□□□□□ -1.85
UBP6YFR010W MNN5P46982 586 aa3.49□□□□□ -1.85
UBP6YFR010W GWT1P47026 490 aa3.49□□□□□ -1.85
UBP6YFR010W XPT1P47165 209 aa3.49□□□□□ -1.85
UBP6YFR010W CGI121Q03705 181 aaKnown RBP3.49□□□□□ -1.85
UBP6YFR010W YTH1Q06102 208 aaPredicted RBP3.49□□□□□ -1.85
UBP6YFR010W MCH1Q07376 486 aa3.49□□□□□ -1.85
UBP6YFR010W HAP2P06774 265 aa3.49□□□□□ -1.85
UBP6YFR010W PHO85P17157 305 aa3.49□□□□□ -1.85
UBP6YFR010W MRPL15P36523 253 aa3.49□□□□□ -1.85
UBP6YFR010W MRPL39P36533 70 aa3.49□□□□□ -1.85
UBP6YFR010W YHL044WP38727 235 aa3.49□□□□□ -1.85
UBP6YFR010W PET8P38921 284 aa3.49□□□□□ -1.85
UBP6YFR010W PAN6P40459 309 aa3.49□□□□□ -1.85
UBP6YFR010W CFD1P40558 293 aa3.49□□□□□ -1.85
UBP6YFR010W OST2P46964 130 aa3.49□□□□□ -1.85
UBP6YFR010W YJL043WP47053 257 aa3.49□□□□□ -1.85
UBP6YFR010W TIM13P53299 105 aa3.49□□□□□ -1.85
UBP6YFR010W YNL046WP53956 172 aa3.49□□□□□ -1.85
UBP6YFR010W AIM36Q03798 255 aa3.49□□□□□ -1.85
UBP6YFR010W PAL1Q05518 499 aaKnown RBP3.49□□□□□ -1.85
UBP6YFR010W YOL160WQ08321 113 aa3.49□□□□□ -1.85
UBP6YFR010W DGA1Q08650 418 aa3.49□□□□□ -1.85
UBP6YFR010W TIM18Q08749 192 aa3.49□□□□□ -1.85
UBP6YFR010W RRG7Q08774 242 aaPredicted RBP3.49□□□□□ -1.85
UBP6YFR010W YOR376WQ08900 122 aa3.49□□□□□ -1.85
UBP6YFR010W PFA4Q12006 378 aa3.49□□□□□ -1.85
UBP6YFR010W FRE8Q12209 686 aa3.49□□□□□ -1.85
UBP6YFR010W YBL112CQ3E7Y4 105 aa3.49□□□□□ -1.85
UBP6YFR010W EDE1P34216 1381 aa3.48□□□□□ -1.85
UBP6YFR010W SIR2P06700 562 aa3.48□□□□□ -1.85
UBP6YFR010W STP22P25604 385 aa3.48□□□□□ -1.85
UBP6YFR010W SNC2P33328 115 aa3.48□□□□□ -1.85
UBP6YFR010W PRY2P36110 329 aa3.48□□□□□ -1.85
UBP6YFR010W SOL2P37262 315 aa3.48□□□□□ -1.85
UBP6YFR010W AVT5P38176 459 aa3.48□□□□□ -1.85
UBP6YFR010W SNM1P40993 198 aa3.48□□□□□ -1.85
UBP6YFR010W HHO1P53551 258 aa3.48□□□□□ -1.85
UBP6YFR010W CRZ1P53968 678 aa3.48□□□□□ -1.85
UBP6YFR010W IDP3P53982 420 aaKnown RBP3.48□□□□□ -1.85
UBP6YFR010W NUP100Q02629 959 aa3.48□□□□□ -1.85
UBP6YFR010W ODC1Q03028 310 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms