RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W PUG1P40100 303 aa4.47□□□□□ -1.69
CDC4YFL009W LYS12P40495 371 aaKnown RBP4.47□□□□□ -1.69
CDC4YFL009W YGR015CP53208 328 aa4.47□□□□□ -1.69
CDC4YFL009W YNR066CP53752 436 aa4.47□□□□□ -1.69
CDC4YFL009W HNT1Q04344 158 aaKnown RBP4.47□□□□□ -1.69
CDC4YFL009W TMN2Q04562 672 aa4.47□□□□□ -1.69
CDC4YFL009W SRL2Q12020 392 aa4.47□□□□□ -1.69
CDC4YFL009W LAS17Q12446 633 aa4.47□□□□□ -1.69
CDC4YFL009W RPS25AQ3E792 108 aaPredicted RBP4.47□□□□□ -1.69
CDC4YFL009W YOR338WQ99326 363 aa4.47□□□□□ -1.69
CDC4YFL009W YAR066WP0CX18 203 aa4.47□□□□□ -1.69
CDC4YFL009W YHR214WP0CX19 203 aa4.47□□□□□ -1.69
CDC4YFL009W TRX3P25372 127 aa4.47□□□□□ -1.69
CDC4YFL009W PRP18P33411 251 aaPredicted RBP4.47□□□□□ -1.69
CDC4YFL009W LRO1P40345 661 aa4.47□□□□□ -1.69
CDC4YFL009W LOC1P43586 204 aaPredicted RBP4.47□□□□□ -1.69
CDC4YFL009W VPS25P47142 202 aa4.47□□□□□ -1.69
CDC4YFL009W FLC3P53121 802 aa4.47□□□□□ -1.69
CDC4YFL009W CSL4P53859 292 aaPredicted RBP4.47□□□□□ -1.69
CDC4YFL009W COX2P00410 251 aa4.46□□□□□ -1.69
CDC4YFL009W INH1P01097 85 aa4.46□□□□□ -1.69
CDC4YFL009W AIM17P23180 465 aaKnown RBP4.46□□□□□ -1.69
CDC4YFL009W MSS51P32335 436 aa4.46□□□□□ -1.69
CDC4YFL009W ERG24P32462 438 aaKnown RBP4.46□□□□□ -1.69
CDC4YFL009W UTR5P32630 166 aa4.46□□□□□ -1.69
CDC4YFL009W PHO11P35842 467 aa4.46□□□□□ -1.69
CDC4YFL009W CBP4P37267 147 aa4.46□□□□□ -1.69
CDC4YFL009W YBR096WP38256 230 aa4.46□□□□□ -1.69
CDC4YFL009W PHO12P38693 467 aa4.46□□□□□ -1.69
CDC4YFL009W YHL044WP38727 235 aa4.46□□□□□ -1.69
CDC4YFL009W MNL1P38888 796 aa4.46□□□□□ -1.69
CDC4YFL009W NSA2P40078 261 aaKnown RBP4.46□□□□□ -1.69
CDC4YFL009W YER188WP40103 239 aa4.46□□□□□ -1.69
CDC4YFL009W YNL195CP40168 261 aa4.46□□□□□ -1.69
CDC4YFL009W NIF3P53081 288 aa4.46□□□□□ -1.69
CDC4YFL009W YGR066CP53242 292 aa4.46□□□□□ -1.69
CDC4YFL009W YGR117CP53270 476 aa4.46□□□□□ -1.69
CDC4YFL009W NAT4Q04751 285 aa4.46□□□□□ -1.69
CDC4YFL009W MCH1Q07376 486 aa4.46□□□□□ -1.69
CDC4YFL009W CHO1P08456 276 aa4.46□□□□□ -1.7
CDC4YFL009W SCH9P11792 824 aaKnown RBP4.46□□□□□ -1.7
CDC4YFL009W YCR007CP25354 239 aa4.46□□□□□ -1.7
CDC4YFL009W CNE1P27825 502 aa4.46□□□□□ -1.7
CDC4YFL009W QDR3P38227 689 aa4.46□□□□□ -1.7
CDC4YFL009W YBR220CP38318 560 aa4.46□□□□□ -1.7
CDC4YFL009W HSP10P38910 106 aa4.46□□□□□ -1.7
CDC4YFL009W MET30P39014 640 aa4.46□□□□□ -1.7
CDC4YFL009W YEL057CP39983 233 aa4.46□□□□□ -1.7
CDC4YFL009W HEM14P40012 539 aa4.46□□□□□ -1.7
CDC4YFL009W PCL7P40186 285 aa4.46□□□□□ -1.7
CDC4YFL009W DLS1P40366 167 aa4.46□□□□□ -1.7
CDC4YFL009W YGR149WP48236 432 aa4.46□□□□□ -1.7
CDC4YFL009W MTM1P53320 366 aa4.46□□□□□ -1.7
CDC4YFL009W RCE1Q03530 315 aa4.46□□□□□ -1.7
CDC4YFL009W THI74Q04083 370 aa4.46□□□□□ -1.7
CDC4YFL009W ATG39Q06159 398 aa4.46□□□□□ -1.7
CDC4YFL009W SLO1Q3E784 85 aa4.46□□□□□ -1.7
CDC4YFL009W RIP1P08067 215 aa4.45□□□□□ -1.7
CDC4YFL009W ANB1P19211 157 aa4.45□□□□□ -1.7
CDC4YFL009W YCR100CP25606 316 aa4.45□□□□□ -1.7
CDC4YFL009W CSE2P33308 149 aa4.45□□□□□ -1.7
CDC4YFL009W YKL187CP34231 750 aa4.45□□□□□ -1.7
CDC4YFL009W PAN3P36102 679 aaPredicted RBP4.45□□□□□ -1.7
CDC4YFL009W MRPL27P36526 146 aaPredicted RBP4.45□□□□□ -1.7
CDC4YFL009W RPF1P38805 295 aaKnown RBP4.45□□□□□ -1.7
CDC4YFL009W RPL13BP40212 199 aaKnown RBP4.45□□□□□ -1.7
CDC4YFL009W YIL060WP40519 144 aa4.45□□□□□ -1.7
CDC4YFL009W EAF6P47128 113 aa4.45□□□□□ -1.7
CDC4YFL009W BAT2P47176 376 aaKnown RBP4.45□□□□□ -1.7
CDC4YFL009W HOL1P53389 586 aa4.45□□□□□ -1.7
CDC4YFL009W GIM5Q04493 163 aa4.45□□□□□ -1.7
CDC4YFL009W RRT7Q07829 113 aa4.45□□□□□ -1.7
CDC4YFL009W IZH2Q12442 317 aa4.45□□□□□ -1.7
CDC4YFL009W HUT1Q12520 339 aa4.45□□□□□ -1.7
CDC4YFL009W RPL13AQ12690 199 aaPredicted RBP4.45□□□□□ -1.7
CDC4YFL009W GLT1Q12680 2145 aaKnown RBP4.45□□□□□ -1.7
CDC4YFL009W HIP1P06775 603 aa4.45□□□□□ -1.7
CDC4YFL009W YIL012WP40551 113 aa4.45□□□□□ -1.7
CDC4YFL009W BUD8P41698 603 aa4.45□□□□□ -1.7
CDC4YFL009W THG1P53215 237 aaKnown RBP4.45□□□□□ -1.7
CDC4YFL009W YAP1802P53309 568 aa4.45□□□□□ -1.7
CDC4YFL009W UPS3Q04006 179 aa4.45□□□□□ -1.7
CDC4YFL009W CNL1Q06333 122 aa4.45□□□□□ -1.7
CDC4YFL009W NAT5Q08689 176 aa4.45□□□□□ -1.7
CDC4YFL009W NPC2Q12408 173 aa4.45□□□□□ -1.7
CDC4YFL009W YLR415CO13578 112 aa4.44□□□□□ -1.7
CDC4YFL009W TPI1P00942 248 aaKnown RBP4.44□□□□□ -1.7
CDC4YFL009W DPM1P14020 267 aaKnown RBP4.44□□□□□ -1.7
CDC4YFL009W RPB5P20434 215 aa4.44□□□□□ -1.7
CDC4YFL009W ERG4P25340 473 aa4.44□□□□□ -1.7
CDC4YFL009W ALK2P32789 676 aaPredicted RBP4.44□□□□□ -1.7
CDC4YFL009W PRY2P36110 329 aa4.44□□□□□ -1.7
CDC4YFL009W ICS2P38284 255 aa4.44□□□□□ -1.7
CDC4YFL009W YBR292CP38357 123 aa4.44□□□□□ -1.7
CDC4YFL009W RIB4P50861 169 aaPredicted RBP4.44□□□□□ -1.7
CDC4YFL009W BUD25P85052 153 aa4.44□□□□□ -1.7
CDC4YFL009W SKO1Q02100 647 aa4.44□□□□□ -1.7
CDC4YFL009W BSP1Q06604 576 aa4.44□□□□□ -1.7
CDC4YFL009W LEU9Q12166 604 aaKnown RBP4.44□□□□□ -1.7
CDC4YFL009W SAL1D6W196 494 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms