RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B YER135CP40082 130 aa1.3□□□□□ -2.2
YFL002W-BYFL002W-B NUP49Q02199 472 aa1.3□□□□□ -2.2
YFL002W-BYFL002W-B YOR020W-AQ3E824 90 aa1.3□□□□□ -2.2
YFL002W-BYFL002W-B MATALPHA1P0CY06 175 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B HMLALPHA1P0CY07 175 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B PEX17P40155 199 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B YJR149WP47177 404 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B YML096WQ04489 525 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B SML1Q04964 104 aa1.29□□□□□ -2.2
YFL002W-BYFL002W-B CDC8P00572 216 aa1.28□□□□□ -2.2
YFL002W-BYFL002W-B HAM1P47119 197 aaKnown RBP1.28□□□□□ -2.2
YFL002W-BYFL002W-B NTF2P33331 125 aaKnown RBP1.27□□□□□ -2.21
YFL002W-BYFL002W-B RPL33BP41056 107 aaKnown RBP1.27□□□□□ -2.21
YFL002W-BYFL002W-B MRPL50P53724 139 aa1.27□□□□□ -2.21
YFL002W-BYFL002W-B YLR162WQ06235 118 aa1.27□□□□□ -2.21
YFL002W-BYFL002W-B USB1Q12208 290 aaKnown RBP1.27□□□□□ -2.21
YFL002W-BYFL002W-B CDC10P25342 322 aaKnown RBP1.26□□□□□ -2.21
YFL002W-BYFL002W-B AVT2P39981 480 aa1.26□□□□□ -2.21
YFL002W-BYFL002W-B SSQ1Q05931 657 aaPredicted RBP1.26□□□□□ -2.21
YFL002W-BYFL002W-B DRS2P39524 1355 aa1.26□□□□□ -2.21
YFL002W-BYFL002W-B RPL2AP0CX45 254 aaKnown RBP1.25□□□□□ -2.21
YFL002W-BYFL002W-B RPL2BP0CX46 254 aaKnown RBP1.25□□□□□ -2.21
YFL002W-BYFL002W-B RPO26P20435 155 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B MRPL25P23369 157 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B VPS21P36017 210 aaKnown RBP1.25□□□□□ -2.21
YFL002W-BYFL002W-B IRC22P40006 225 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B YRB2P40517 327 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B ILM1P47155 203 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B BOL2P53082 120 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B NSA1P53136 463 aaPredicted RBP1.25□□□□□ -2.21
YFL002W-BYFL002W-B YNR077CP53758 84 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B PET117Q02771 107 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B PSF1Q12488 208 aa1.25□□□□□ -2.21
YFL002W-BYFL002W-B YCR016WP25617 290 aaKnown RBP1.24□□□□□ -2.21
YFL002W-BYFL002W-B SRB4P32569 687 aa1.24□□□□□ -2.21
YFL002W-BYFL002W-B SRY1P36007 326 aa1.24□□□□□ -2.21
YFL002W-BYFL002W-B URA8P38627 578 aaPredicted RBP1.24□□□□□ -2.21
YFL002W-BYFL002W-B AIF1P52923 378 aa1.24□□□□□ -2.21
YFL002W-BYFL002W-B SRL4Q03085 281 aa1.24□□□□□ -2.21
YFL002W-BYFL002W-B TPO4Q12256 659 aa1.24□□□□□ -2.21
YFL002W-BYFL002W-B RPL27BP0C2H7 136 aaKnown RBP1.23□□□□□ -2.21
YFL002W-BYFL002W-B YGL010WP25338 174 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B MEI4P29467 408 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B MSN4P33749 630 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B YBR220CP38318 560 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B CUE1P38428 203 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B TIR3P40552 269 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B BUD25P85052 153 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B RRN5Q02983 363 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B KRE28Q04431 385 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B MED4Q12343 284 aa1.23□□□□□ -2.21
YFL002W-BYFL002W-B PDR18P53756 1333 aa1.22□□□□□ -2.21
YFL002W-BYFL002W-B PGD1P40356 397 aa1.22□□□□□ -2.21
YFL002W-BYFL002W-B MCM22P47167 239 aa1.22□□□□□ -2.21
YFL002W-BYFL002W-B ALG13P53178 202 aa1.22□□□□□ -2.21
YFL002W-BYFL002W-B LPP1Q04396 274 aa1.22□□□□□ -2.21
YFL002W-BYFL002W-B REP2P03872 296 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B RHO1P06780 209 aaKnown RBP1.21□□□□□ -2.22
YFL002W-BYFL002W-B BCY1P07278 416 aaKnown RBP1.21□□□□□ -2.22
YFL002W-BYFL002W-B YLR156WP0CE96 114 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B YLR159WP0CE97 114 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B YLR161WP0CE98 114 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B FPR1P20081 114 aaKnown RBP1.21□□□□□ -2.22
YFL002W-BYFL002W-B FZF1P32805 299 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B SVP26P38869 228 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B FMC1P40491 155 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B NOP13P53883 403 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
YFL002W-BYFL002W-B ABF2Q02486 183 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B GAS3Q03655 524 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B YMD8Q03697 442 aa1.21□□□□□ -2.22
YFL002W-BYFL002W-B DOG2P38773 246 aa1.2□□□□□ -2.22
YFL002W-BYFL002W-B YNL010WP53981 241 aaKnown RBP1.2□□□□□ -2.22
YFL002W-BYFL002W-B CDC28P00546 298 aaKnown RBP1.19□□□□□ -2.22
YFL002W-BYFL002W-B DBF2P22204 572 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B MIC12P38341 106 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B YNL217WP40152 326 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B ICE2P40499 491 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B LIA1P47120 325 aaKnown RBP1.19□□□□□ -2.22
YFL002W-BYFL002W-B NUP84P52891 726 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B YIL177CP40434 1758 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B YJL225CP40889 1758 aa1.19□□□□□ -2.22
YFL002W-BYFL002W-B QCR8P08525 94 aa1.18□□□□□ -2.22
YFL002W-BYFL002W-B URA6P15700 204 aa1.18□□□□□ -2.22
YFL002W-BYFL002W-B ATG22P25568 528 aa1.18□□□□□ -2.22
YFL002W-BYFL002W-B RPL13BP40212 199 aaKnown RBP1.18□□□□□ -2.22
YFL002W-BYFL002W-B SNZ1Q03148 297 aa1.18□□□□□ -2.22
YFL002W-BYFL002W-B RPL13AQ12690 199 aaPredicted RBP1.18□□□□□ -2.22
YFL002W-BYFL002W-B TDA8Q6B2U8 126 aa1.18□□□□□ -2.22
YFL002W-BYFL002W-B UPS2P35200 230 aa1.17□□□□□ -2.22
YFL002W-BYFL002W-B GAA1P39012 614 aa1.17□□□□□ -2.22
YFL002W-BYFL002W-B RPC17P47076 161 aa1.17□□□□□ -2.22
YFL002W-BYFL002W-B EAF6P47128 113 aa1.17□□□□□ -2.22
YFL002W-BYFL002W-B CDC123Q05791 360 aa1.17□□□□□ -2.22
YFL002W-BYFL002W-B POP4P38336 279 aa1.16□□□□□ -2.22
YFL002W-BYFL002W-B DOC1P53068 250 aa1.16□□□□□ -2.22
YFL002W-BYFL002W-B TUS1Q06412 1307 aa1.16□□□□□ -2.22
YFL002W-BYFL002W-B SPT3P06844 337 aa1.15□□□□□ -2.22
YFL002W-BYFL002W-B UTP30P36144 274 aaKnown RBP1.15□□□□□ -2.22
YFL002W-BYFL002W-B MRPL17P36528 281 aa1.15□□□□□ -2.22
YFL002W-BYFL002W-B YLR283WQ05867 314 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms