RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	PDS1	P40316	373 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	ILM1	P47155	203 aa		3.12	□□□□□ -1.91
RAD4	YER162C	NUP57	P48837	541 aa		3.12	□□□□□ -1.91
RAD4	YER162C	PMT5	P52867	743 aa		3.12	□□□□□ -1.91
RAD4	YER162C	POP6	P53218	158 aa		3.12	□□□□□ -1.91
RAD4	YER162C	BOR1	P53838	576 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YNL095C	P53932	642 aa		3.12	□□□□□ -1.91
RAD4	YER162C	UBC7	Q02159	165 aa		3.12	□□□□□ -1.91
RAD4	YER162C	SDH7	Q04401	133 aa		3.12	□□□□□ -1.91
RAD4	YER162C	SEI1	Q06058	285 aa		3.12	□□□□□ -1.91
RAD4	YER162C	MRX9	Q07349	420 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	ENB1	Q08299	606 aa		3.12	□□□□□ -1.91
RAD4	YER162C	SGT1	Q08446	395 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YOR283W	Q12040	230 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	YLR050C	Q12155	161 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	TRM13	Q12383	476 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YPL247C	Q12523	523 aa		3.12	□□□□□ -1.91
RAD4	YER162C	RIB3	Q99258	208 aa		3.12	□□□□□ -1.91
RAD4	YER162C	MES1	P00958	751 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	CMD1	P06787	147 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	MCK1	P21965	375 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	MRPS5	P33759	307 aa		3.11	□□□□□ -1.91
RAD4	YER162C	UBC11	P52492	156 aa		3.11	□□□□□ -1.91
RAD4	YER162C	NCE103	P53615	221 aa		3.11	□□□□□ -1.91
RAD4	YER162C	TEX1	P53851	422 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	CUZ1	P53899	274 aa		3.11	□□□□□ -1.91
RAD4	YER162C	TDA1	Q03533	586 aa		3.11	□□□□□ -1.91
RAD4	YER162C	PKR1	Q03880	122 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	VBA1	Q04301	562 aa		3.11	□□□□□ -1.91
RAD4	YER162C	YMR315W	Q04869	349 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	YOP1	Q12402	180 aa		3.11	□□□□□ -1.91
RAD4	YER162C	YDL199C	Q12407	687 aa		3.11	□□□□□ -1.91
RAD4	YER162C	FOL3	Q12676	427 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD4	YER162C	DET1	Q99288	334 aa	Known RBP	3.11	□□□□□ -1.91
RAD4	YER162C	ARF1	P11076	181 aa	Known RBP	3.1	□□□□□ -1.91
RAD4	YER162C	RPB5	P20434	215 aa		3.1	□□□□□ -1.91
RAD4	YER162C	RPS1B	P23248	255 aa	Known RBP	3.1	□□□□□ -1.91
RAD4	YER162C	COX13	P32799	129 aa		3.1	□□□□□ -1.91
RAD4	YER162C	ZRT1	P32804	376 aa		3.1	□□□□□ -1.91
RAD4	YER162C	FRM2	P37261	193 aa		3.1	□□□□□ -1.91
RAD4	YER162C	SDH8	P38345	138 aa		3.1	□□□□□ -1.91
RAD4	YER162C	RFC2	P40348	353 aa		3.1	□□□□□ -1.91
RAD4	YER162C	MSY1	P48527	492 aa		3.1	□□□□□ -1.91
RAD4	YER162C	MSC1	Q03104	513 aa		3.1	□□□□□ -1.91
RAD4	YER162C	SDC1	Q03323	175 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YDR249C	Q03787	373 aa		3.1	□□□□□ -1.91
RAD4	YER162C	SSK1	Q07084	712 aa		3.1	□□□□□ -1.91
RAD4	YER162C	PRP11	Q07350	266 aa	Predicted RBP	3.1	□□□□□ -1.91
RAD4	YER162C	YOR214C	Q12282	236 aa		3.1	□□□□□ -1.91
RAD4	YER162C	GEP5	Q12393	293 aa		3.1	□□□□□ -1.91
RAD4	YER162C	MRX4	Q12467	430 aa		3.1	□□□□□ -1.91
RAD4	YER162C	PSF1	Q12488	208 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YER145C-A	A0A023PYF4	145 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YLR415C	O13578	112 aa		3.1	□□□□□ -1.91
RAD4	YER162C	PEP4	P07267	405 aa	Known RBP	3.1	□□□□□ -1.91
RAD4	YER162C	BAR1	P12630	587 aa		3.1	□□□□□ -1.91
RAD4	YER162C	CTS1	P29029	562 aa		3.1	□□□□□ -1.91
RAD4	YER162C	HOM6	P31116	359 aa	Known RBP	3.1	□□□□□ -1.91
RAD4	YER162C	YKL187C	P34231	750 aa		3.1	□□□□□ -1.91
RAD4	YER162C	ECM15	P35195	104 aa		3.1	□□□□□ -1.91
RAD4	YER162C	SPC34	P36131	295 aa		3.1	□□□□□ -1.91
RAD4	YER162C	GET2	P40056	285 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YIL012W	P40551	113 aa		3.1	□□□□□ -1.91
RAD4	YER162C	CHA4	P43634	648 aa		3.1	□□□□□ -1.91
RAD4	YER162C	IRC18	P47056	224 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YJR012C	P47087	207 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YGR017W	P53210	297 aa		3.1	□□□□□ -1.91
RAD4	YER162C	RHO4	Q00246	291 aa		3.1	□□□□□ -1.91
RAD4	YER162C	YPL077C	Q02831	240 aa		3.1	□□□□□ -1.91
RAD4	YER162C	MSS11	Q03825	758 aa		3.1	□□□□□ -1.91
RAD4	YER162C	SML1	Q04964	104 aa		3.1	□□□□□ -1.91
RAD4	YER162C	PAL1	Q05518	499 aa	Known RBP	3.1	□□□□□ -1.91
RAD4	YER162C	ASA1	Q06822	443 aa		3.1	□□□□□ -1.91
RAD4	YER162C	THP1	Q08231	455 aa		3.1	□□□□□ -1.91
RAD4	YER162C	THI72	Q08579	599 aa		3.1	□□□□□ -1.91
RAD4	YER162C	NCA2	Q12374	616 aa		3.1	□□□□□ -1.91
RAD4	YER162C	CCW14	O13547	238 aa		3.09	□□□□□ -1.91
RAD4	YER162C	YPR096C	O13587	100 aa		3.09	□□□□□ -1.91
RAD4	YER162C	ADE5,7	P07244	802 aa	Known RBP	3.09	□□□□□ -1.91
RAD4	YER162C	CNB1	P25296	175 aa		3.09	□□□□□ -1.91
RAD4	YER162C	ACB1	P31787	87 aa		3.09	□□□□□ -1.91
RAD4	YER162C	PHA2	P32452	334 aa		3.09	□□□□□ -1.91
RAD4	YER162C	HSP150	P32478	413 aa		3.09	□□□□□ -1.91
RAD4	YER162C	MRPL24	P36525	258 aa	Predicted RBP	3.09	□□□□□ -1.91
RAD4	YER162C	APL3	P38065	1025 aa		3.09	□□□□□ -1.91
RAD4	YER162C	ETR1	P38071	380 aa		3.09	□□□□□ -1.91
RAD4	YER162C	YBR241C	P38142	488 aa		3.09	□□□□□ -1.91
RAD4	YER162C	IPI1	P38803	334 aa	Predicted RBP	3.09	□□□□□ -1.91
RAD4	YER162C	SMB1	P40018	196 aa	Known RBP	3.09	□□□□□ -1.91
RAD4	YER162C	KRE29	P40026	464 aa		3.09	□□□□□ -1.91
RAD4	YER162C	SAS2	P40963	338 aa		3.09	□□□□□ -1.91
RAD4	YER162C	IMD3	P50095	523 aa	Known RBP	3.09	□□□□□ -1.91
RAD4	YER162C	TPC1	P53257	314 aa		3.09	□□□□□ -1.91
RAD4	YER162C	ASI3	P53983	676 aa		3.09	□□□□□ -1.91
RAD4	YER162C	IRC15	Q02733	499 aa		3.09	□□□□□ -1.91
RAD4	YER162C	MHR1	Q06630	226 aa		3.09	□□□□□ -1.91
RAD4	YER162C	YCT1	Q12235	531 aa		3.09	□□□□□ -1.91
RAD4	YER162C	PST2	Q12335	198 aa	Known RBP	3.09	□□□□□ -1.91
RAD4	YER162C	BPH1	P25356	2167 aa		3.09	□□□□□ -1.92
RAD4	YER162C	DDI2	P0CH63	225 aa		3.09	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms