RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YPL039WQ03080 316 aa3.93□□□□□ -1.78
NUP42YDR192C CGI121Q03705 181 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C NNT1Q05874 261 aa3.93□□□□□ -1.78
NUP42YDR192C PRP8P33334 2413 aaKnown RBP3.93□□□□□ -1.78
NUP42YDR192C TRP1P00912 224 aa3.92□□□□□ -1.78
NUP42YDR192C SIR2P06700 562 aa3.92□□□□□ -1.78
NUP42YDR192C MET2P08465 486 aa3.92□□□□□ -1.78
NUP42YDR192C MRP1P10662 321 aaKnown RBP3.92□□□□□ -1.78
NUP42YDR192C DAL82P21705 255 aa3.92□□□□□ -1.78
NUP42YDR192C DBF2P22204 572 aa3.92□□□□□ -1.78
NUP42YDR192C RAD51P25454 400 aa3.92□□□□□ -1.78
NUP42YDR192C STP22P25604 385 aa3.92□□□□□ -1.78
NUP42YDR192C BUD23P25627 275 aaPredicted RBP3.92□□□□□ -1.78
NUP42YDR192C MNS1P32906 549 aa3.92□□□□□ -1.78
NUP42YDR192C TMA19P35691 167 aaKnown RBP3.92□□□□□ -1.78
NUP42YDR192C SFK1P35735 353 aa3.92□□□□□ -1.78
NUP42YDR192C RCN1P36054 211 aa3.92□□□□□ -1.78
NUP42YDR192C MAL32P38158 584 aa3.92□□□□□ -1.78
NUP42YDR192C RRF1P38771 230 aa3.92□□□□□ -1.78
NUP42YDR192C YHR180WP38868 163 aa3.92□□□□□ -1.78
NUP42YDR192C SIM1P40472 476 aa3.92□□□□□ -1.78
NUP42YDR192C UTP25P40498 721 aaKnown RBP3.92□□□□□ -1.78
NUP42YDR192C YGR210CP42942 411 aa3.92□□□□□ -1.78
NUP42YDR192C YPI1P43587 155 aa3.92□□□□□ -1.78
NUP42YDR192C RPE1P46969 238 aa3.92□□□□□ -1.78
NUP42YDR192C YGL204CP53089 101 aa3.92□□□□□ -1.78
NUP42YDR192C VOA1P53262 265 aa3.92□□□□□ -1.78
NUP42YDR192C NRM1P53718 249 aa3.92□□□□□ -1.78
NUP42YDR192C MPP6P53725 186 aaPredicted RBP3.92□□□□□ -1.78
NUP42YDR192C PDR16P53860 351 aaKnown RBP3.92□□□□□ -1.78
NUP42YDR192C RSM10Q03201 203 aa3.92□□□□□ -1.78
NUP42YDR192C DIG2Q03373 323 aaKnown RBP3.92□□□□□ -1.78
NUP42YDR192C SCS7Q03529 384 aa3.92□□□□□ -1.78
NUP42YDR192C INP1Q03694 420 aa3.92□□□□□ -1.78
NUP42YDR192C PEX30Q06169 523 aa3.92□□□□□ -1.78
NUP42YDR192C AKR2Q12013 749 aa3.92□□□□□ -1.78
NUP42YDR192C SLH1P53327 1967 aaKnown RBP3.91□□□□□ -1.78
NUP42YDR192C YHR214C-DP0CX93 97 aa3.91□□□□□ -1.78
NUP42YDR192C YPK2P18961 677 aa3.91□□□□□ -1.78
NUP42YDR192C POP5P28005 173 aa3.91□□□□□ -1.78
NUP42YDR192C ARO7P32178 256 aa3.91□□□□□ -1.78
NUP42YDR192C SPT14P32363 452 aa3.91□□□□□ -1.78
NUP42YDR192C PAU2P32612 120 aa3.91□□□□□ -1.78
NUP42YDR192C UTH1P36135 365 aa3.91□□□□□ -1.78
NUP42YDR192C YBR096WP38256 230 aa3.91□□□□□ -1.78
NUP42YDR192C YJL218WP40892 196 aaKnown RBP3.91□□□□□ -1.78
NUP42YDR192C TOS2P50078 622 aa3.91□□□□□ -1.78
NUP42YDR192C TPN1P53099 579 aa3.91□□□□□ -1.78
NUP42YDR192C SYF2P53277 215 aaPredicted RBP3.91□□□□□ -1.78
NUP42YDR192C MAL12P53341 584 aa3.91□□□□□ -1.78
NUP42YDR192C MKC7P53379 596 aa3.91□□□□□ -1.78
NUP42YDR192C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
NUP42YDR192C SNX41Q04053 625 aa3.91□□□□□ -1.78
NUP42YDR192C PAL1Q05518 499 aaKnown RBP3.91□□□□□ -1.78
NUP42YDR192C LDS2Q08218 356 aa3.91□□□□□ -1.78
NUP42YDR192C YOR283WQ12040 230 aaKnown RBP3.91□□□□□ -1.78
NUP42YDR192C BTS1Q12051 335 aa3.91□□□□□ -1.78
NUP42YDR192C YOP1Q12402 180 aa3.91□□□□□ -1.78
NUP42YDR192C PRM4Q12498 284 aa3.91□□□□□ -1.78
NUP42YDR192C YLR099W-AQ3E798 87 aa3.91□□□□□ -1.78
NUP42YDR192C FSH3Q99369 266 aa3.91□□□□□ -1.78
NUP42YDR192C PRB1P09232 635 aa3.9□□□□□ -1.79
NUP42YDR192C MDH3P32419 343 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
NUP42YDR192C SRL3P36167 246 aa3.9□□□□□ -1.79
NUP42YDR192C MRPL3P36516 390 aa3.9□□□□□ -1.79
NUP42YDR192C ADH5P38113 351 aaKnown RBP3.9□□□□□ -1.79
NUP42YDR192C SYS1P41544 203 aa3.9□□□□□ -1.79
NUP42YDR192C AIM25P47140 327 aa3.9□□□□□ -1.79
NUP42YDR192C CWC23P52868 283 aaPredicted RBP3.9□□□□□ -1.79
NUP42YDR192C LSM7P53905 115 aaKnown RBP3.9□□□□□ -1.79
NUP42YDR192C NRK1P53915 240 aa3.9□□□□□ -1.79
NUP42YDR192C MRX8Q05473 314 aa3.9□□□□□ -1.79
NUP42YDR192C HRI1Q05905 244 aaKnown RBP3.9□□□□□ -1.79
NUP42YDR192C ASR1Q06834 288 aa3.9□□□□□ -1.79
NUP42YDR192C YOL024WQ08172 172 aa3.9□□□□□ -1.79
NUP42YDR192C PEX27Q08580 376 aa3.9□□□□□ -1.79
NUP42YDR192C RRG7Q08774 242 aaPredicted RBP3.9□□□□□ -1.79
NUP42YDR192C NIP7Q08962 181 aaKnown RBP3.9□□□□□ -1.79
NUP42YDR192C YRM1Q12340 786 aa3.9□□□□□ -1.79
NUP42YDR192C PRP46Q12417 451 aaPredicted RBP3.9□□□□□ -1.79
NUP42YDR192C HTZ1Q12692 134 aaKnown RBP3.9□□□□□ -1.79
NUP42YDR192C OPI3P05375 206 aa3.89□□□□□ -1.79
NUP42YDR192C PIS1P06197 220 aaKnown RBP3.89□□□□□ -1.79
NUP42YDR192C HIS3P06633 220 aa3.89□□□□□ -1.79
NUP42YDR192C MATALPHA1P0CY06 175 aa3.89□□□□□ -1.79
NUP42YDR192C HMLALPHA1P0CY07 175 aa3.89□□□□□ -1.79
NUP42YDR192C UTR1P21373 530 aa3.89□□□□□ -1.79
NUP42YDR192C CAM1P29547 415 aaKnown RBP3.89□□□□□ -1.79
NUP42YDR192C AVT5P38176 459 aa3.89□□□□□ -1.79
NUP42YDR192C RTC2P38279 296 aa3.89□□□□□ -1.79
NUP42YDR192C YBR242WP38331 238 aa3.89□□□□□ -1.79
NUP42YDR192C YHK8P38776 514 aa3.89□□□□□ -1.79
NUP42YDR192C DLS1P40366 167 aa3.89□□□□□ -1.79
NUP42YDR192C SPG5P42933 373 aa3.89□□□□□ -1.79
NUP42YDR192C MRPL50P53724 139 aa3.89□□□□□ -1.79
NUP42YDR192C YLR152CP54072 576 aa3.89□□□□□ -1.79
NUP42YDR192C BNA7Q04066 261 aa3.89□□□□□ -1.79
NUP42YDR192C COX20Q04935 205 aa3.89□□□□□ -1.79
NUP42YDR192C TAZ1Q06510 381 aa3.89□□□□□ -1.79
NUP42YDR192C MIM1Q08176 113 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms