RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W GON7P46984 123 aa1.97□□□□□ -2.09
VPS41YDR080W GWT1P47026 490 aa1.97□□□□□ -2.09
VPS41YDR080W SOL1P50278 321 aa1.97□□□□□ -2.09
VPS41YDR080W PMT5P52867 743 aa1.97□□□□□ -2.09
VPS41YDR080W GET1P53192 235 aa1.97□□□□□ -2.09
VPS41YDR080W DYN3Q04949 312 aa1.97□□□□□ -2.09
VPS41YDR080W YOR289WQ12012 251 aaPredicted RBP1.97□□□□□ -2.09
VPS41YDR080W ISA2Q12425 185 aa1.97□□□□□ -2.09
VPS41YDR080W URA2P07259 2214 aaKnown RBP1.97□□□□□ -2.09
VPS41YDR080W GRX2P17695 143 aaKnown RBP1.97□□□□□ -2.09
VPS41YDR080W FUN19P28003 413 aaPredicted RBP1.97□□□□□ -2.09
VPS41YDR080W ARC19P33204 171 aaKnown RBP1.97□□□□□ -2.09
VPS41YDR080W PRS4P38063 326 aaPredicted RBP1.97□□□□□ -2.09
VPS41YDR080W CIN4P39110 191 aa1.97□□□□□ -2.09
VPS41YDR080W SYF2P53277 215 aaPredicted RBP1.97□□□□□ -2.09
VPS41YDR080W RBS1Q05672 457 aaKnown RBP1.97□□□□□ -2.09
VPS41YDR080W UPS1Q05776 175 aa1.97□□□□□ -2.09
VPS41YDR080W PRM3Q08931 133 aa1.97□□□□□ -2.09
VPS41YDR080W ERV2Q12284 196 aa1.97□□□□□ -2.09
VPS41YDR080W COX5BP00425 151 aa1.96□□□□□ -2.1
VPS41YDR080W REP2P03872 296 aa1.96□□□□□ -2.1
VPS41YDR080W TPK3P05986 398 aa1.96□□□□□ -2.1
VPS41YDR080W ROX3P25046 220 aa1.96□□□□□ -2.1
VPS41YDR080W TDA1Q03533 586 aa1.96□□□□□ -2.1
VPS41YDR080W MIX17Q03667 156 aa1.96□□□□□ -2.1
VPS41YDR080W SNX3Q08826 162 aaKnown RBP1.96□□□□□ -2.1
VPS41YDR080W TDH1P00360 332 aaKnown RBP1.96□□□□□ -2.1
VPS41YDR080W PHO80P20052 293 aa1.96□□□□□ -2.1
VPS41YDR080W SAG1P20840 650 aa1.96□□□□□ -2.1
VPS41YDR080W SPS18P32572 300 aa1.96□□□□□ -2.1
VPS41YDR080W IPT1P38954 527 aa1.96□□□□□ -2.1
VPS41YDR080W NOP16P40007 231 aaKnown RBP1.96□□□□□ -2.1
VPS41YDR080W SYG1P40528 902 aa1.96□□□□□ -2.1
VPS41YDR080W YFR035CP43608 114 aa1.96□□□□□ -2.1
VPS41YDR080W YJR012CP47087 207 aa1.96□□□□□ -2.1
VPS41YDR080W ERG25P53045 309 aa1.96□□□□□ -2.1
VPS41YDR080W OKP1P53298 406 aa1.96□□□□□ -2.1
VPS41YDR080W LIP2Q06005 328 aa1.96□□□□□ -2.1
VPS41YDR080W SIR2P06700 562 aa1.95□□□□□ -2.1
VPS41YDR080W FBA1P14540 359 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W KRR1P25586 316 aaPredicted RBP1.95□□□□□ -2.1
VPS41YDR080W CPR5P35176 225 aa1.95□□□□□ -2.1
VPS41YDR080W RPS20P38701 121 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W PRE5P40302 234 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W PIR5P46999 287 aa1.95□□□□□ -2.1
VPS41YDR080W VPS55P47111 140 aa1.95□□□□□ -2.1
VPS41YDR080W EFM3P47163 339 aa1.95□□□□□ -2.1
VPS41YDR080W DSL1P53847 754 aa1.95□□□□□ -2.1
VPS41YDR080W RNH201P53942 307 aa1.95□□□□□ -2.1
VPS41YDR080W YKR005CQ02203 525 aa1.95□□□□□ -2.1
VPS41YDR080W GAL83Q04739 417 aa1.95□□□□□ -2.1
VPS41YDR080W MRPL35Q06678 367 aa1.95□□□□□ -2.1
VPS41YDR080W LOT6Q07923 191 aa1.95□□□□□ -2.1
VPS41YDR080W SPC3Q12133 184 aa1.95□□□□□ -2.1
VPS41YDR080W YBR126W-AQ8TGU7 68 aa1.95□□□□□ -2.1
VPS41YDR080W NFT1P0CE68 1218 aa1.95□□□□□ -2.1
VPS41YDR080W RPL30P14120 105 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W OLE1P21147 510 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W AFG1P32317 509 aa1.95□□□□□ -2.1
VPS41YDR080W TFC1P32367 649 aa1.95□□□□□ -2.1
VPS41YDR080W HYM1P32464 399 aa1.95□□□□□ -2.1
VPS41YDR080W MRPL4P36517 319 aa1.95□□□□□ -2.1
VPS41YDR080W CHL4P38907 458 aa1.95□□□□□ -2.1
VPS41YDR080W NRK1P53915 240 aa1.95□□□□□ -2.1
VPS41YDR080W YNL033WP53964 284 aa1.95□□□□□ -2.1
VPS41YDR080W YNL019CP53975 284 aa1.95□□□□□ -2.1
VPS41YDR080W ACT1P60010 375 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W MRX8Q05473 314 aa1.95□□□□□ -2.1
VPS41YDR080W YHR212W-AP0CX91 67 aa1.95□□□□□ -2.1
VPS41YDR080W PEX3P28795 441 aa1.95□□□□□ -2.1
VPS41YDR080W SKG1P36169 355 aa1.95□□□□□ -2.1
VPS41YDR080W MBB1P39534 108 aa1.95□□□□□ -2.1
VPS41YDR080W MRH4P53166 561 aa1.95□□□□□ -2.1
VPS41YDR080W RRP9Q06506 573 aaKnown RBP1.95□□□□□ -2.1
VPS41YDR080W GPI11Q06636 219 aa1.95□□□□□ -2.1
VPS41YDR080W YOR029WQ12243 111 aa1.95□□□□□ -2.1
VPS41YDR080W MEK1P24719 497 aaPredicted RBP1.94□□□□□ -2.1
VPS41YDR080W CDC10P25342 322 aaKnown RBP1.94□□□□□ -2.1
VPS41YDR080W YRA2P36036 203 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
VPS41YDR080W RFC3P38629 340 aa1.94□□□□□ -2.1
VPS41YDR080W YNL194CP40169 301 aa1.94□□□□□ -2.1
VPS41YDR080W TRS85P46944 698 aa1.94□□□□□ -2.1
VPS41YDR080W RRN9P53437 365 aa1.94□□□□□ -2.1
VPS41YDR080W YNL095CP53932 642 aa1.94□□□□□ -2.1
VPS41YDR080W YHP1Q04116 353 aa1.94□□□□□ -2.1
VPS41YDR080W GRH1Q04410 372 aaKnown RBP1.94□□□□□ -2.1
VPS41YDR080W MRX9Q07349 420 aaKnown RBP1.94□□□□□ -2.1
VPS41YDR080W RIB3Q99258 208 aa1.94□□□□□ -2.1
VPS41YDR080W ECT1P33412 323 aa1.94□□□□□ -2.1
VPS41YDR080W FRM2P37261 193 aa1.94□□□□□ -2.1
VPS41YDR080W SWD3P38123 315 aa1.94□□□□□ -2.1
VPS41YDR080W MPC2P38857 129 aa1.94□□□□□ -2.1
VPS41YDR080W RFC2P40348 353 aa1.94□□□□□ -2.1
VPS41YDR080W MIG2P53035 382 aa1.94□□□□□ -2.1
VPS41YDR080W YIP1P53039 248 aa1.94□□□□□ -2.1
VPS41YDR080W YDR274CP87283 123 aa1.94□□□□□ -2.1
VPS41YDR080W ADD37Q03233 198 aa1.94□□□□□ -2.1
VPS41YDR080W NFI1Q12216 726 aa1.94□□□□□ -2.1
VPS41YDR080W DPB2P24482 689 aaPredicted RBP1.93□□□□□ -2.1
VPS41YDR080W YCR101CP25607 182 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms