RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W ADF1Q2V2Q1 113 aa1.97□□□□□ -2.09
SHR3YDL212W ARG80P07249 177 aa1.96□□□□□ -2.1
SHR3YDL212W GRX2P17695 143 aaKnown RBP1.96□□□□□ -2.1
SHR3YDL212W YMR31P19955 123 aa1.96□□□□□ -2.1
SHR3YDL212W RPL24BP24000 155 aaKnown RBP1.96□□□□□ -2.1
SHR3YDL212W RAD51P25454 400 aa1.96□□□□□ -2.1
SHR3YDL212W SRY1P36007 326 aa1.96□□□□□ -2.1
SHR3YDL212W ECM33P38248 429 aaKnown RBP1.96□□□□□ -2.1
SHR3YDL212W DOG1P38774 246 aa1.96□□□□□ -2.1
SHR3YDL212W YAR068WP39564 161 aa1.96□□□□□ -2.1
SHR3YDL212W COX15P40086 486 aa1.96□□□□□ -2.1
SHR3YDL212W AYR1P40471 297 aa1.96□□□□□ -2.1
SHR3YDL212W NSA1P53136 463 aaPredicted RBP1.96□□□□□ -2.1
SHR3YDL212W CDC123Q05791 360 aa1.96□□□□□ -2.1
SHR3YDL212W YOR020W-AQ3E824 90 aa1.96□□□□□ -2.1
SHR3YDL212W SEY1Q99287 776 aa1.96□□□□□ -2.1
SHR3YDL212W QCR6P00127 147 aa1.95□□□□□ -2.1
SHR3YDL212W CDC36P06100 191 aaPredicted RBP1.95□□□□□ -2.1
SHR3YDL212W FCY2P17064 533 aa1.95□□□□□ -2.1
SHR3YDL212W PRE6P40303 254 aaKnown RBP1.95□□□□□ -2.1
SHR3YDL212W MSS2P40990 351 aa1.95□□□□□ -2.1
SHR3YDL212W MIC26P50087 233 aa1.95□□□□□ -2.1
SHR3YDL212W PGA2P53903 129 aa1.95□□□□□ -2.1
SHR3YDL212W YML096WQ04489 525 aa1.95□□□□□ -2.1
SHR3YDL212W PPA2P28239 310 aa1.94□□□□□ -2.1
SHR3YDL212W SIP3P38717 1229 aa1.94□□□□□ -2.1
SHR3YDL212W ALG13P53178 202 aa1.94□□□□□ -2.1
SHR3YDL212W YKL183C-AQ3E765 70 aa1.94□□□□□ -2.1
SHR3YDL212W URA6P15700 204 aa1.93□□□□□ -2.1
SHR3YDL212W PBN1P25580 416 aa1.93□□□□□ -2.1
SHR3YDL212W VMA11P32842 164 aa1.93□□□□□ -2.1
SHR3YDL212W YBR063CP38083 404 aa1.93□□□□□ -2.1
SHR3YDL212W YER034WP40022 185 aaKnown RBP1.93□□□□□ -2.1
SHR3YDL212W DAD3P69850 94 aa1.93□□□□□ -2.1
SHR3YDL212W ABF2Q02486 183 aa1.93□□□□□ -2.1
SHR3YDL212W SSQ1Q05931 657 aaPredicted RBP1.93□□□□□ -2.1
SHR3YDL212W ARR2Q06597 130 aa1.93□□□□□ -2.1
SHR3YDL212W BOL1Q3E793 110 aa1.93□□□□□ -2.1
SHR3YDL212W RPL9AP05738 191 aaKnown RBP1.92□□□□□ -2.1
SHR3YDL212W NHP6BP11633 99 aaKnown RBP1.92□□□□□ -2.1
SHR3YDL212W PEX4P29340 183 aa1.92□□□□□ -2.1
SHR3YDL212W MGM101P32787 269 aaKnown RBP1.92□□□□□ -2.1
SHR3YDL212W YHR180WP38868 163 aa1.92□□□□□ -2.1
SHR3YDL212W ERG28P40030 148 aa1.92□□□□□ -2.1
SHR3YDL212W RAD17P48581 401 aa1.92□□□□□ -2.1
SHR3YDL212W RPL9BP51401 191 aaKnown RBP1.92□□□□□ -2.1
SHR3YDL212W FYV6P53913 173 aa1.92□□□□□ -2.1
SHR3YDL212W PRM15Q03262 622 aa1.92□□□□□ -2.1
SHR3YDL212W MRPS8Q03799 155 aa1.92□□□□□ -2.1
SHR3YDL212W NEJ1Q06148 342 aa1.92□□□□□ -2.1
SHR3YDL212W ATO3Q12359 275 aa1.92□□□□□ -2.1
SHR3YDL212W DCN1Q12395 269 aa1.92□□□□□ -2.1
SHR3YDL212W CDC28P00546 298 aaKnown RBP1.91□□□□□ -2.1
SHR3YDL212W MSW1P04803 379 aa1.91□□□□□ -2.1
SHR3YDL212W YBR121C-AP0C5L4 52 aa1.91□□□□□ -2.1
SHR3YDL212W SCL1P21243 252 aaKnown RBP1.91□□□□□ -2.1
SHR3YDL212W MDH3P32419 343 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SHR3YDL212W ASF2P32448 525 aaPredicted RBP1.91□□□□□ -2.1
SHR3YDL212W SSO1P32867 290 aa1.91□□□□□ -2.1
SHR3YDL212W IRC22P40006 225 aa1.91□□□□□ -2.1
SHR3YDL212W RSM25P40496 264 aa1.91□□□□□ -2.1
SHR3YDL212W BRR6P53062 197 aa1.91□□□□□ -2.1
SHR3YDL212W DID2P69771 204 aa1.91□□□□□ -2.1
SHR3YDL212W BNA7Q04066 261 aa1.91□□□□□ -2.1
SHR3YDL212W TRM12Q04235 462 aa1.91□□□□□ -2.1
SHR3YDL212W HEM25Q07534 307 aa1.91□□□□□ -2.1
SHR3YDL212W DRS2P39524 1355 aa1.9□□□□□ -2.11
SHR3YDL212W CDC33P07260 213 aaKnown RBP1.9□□□□□ -2.11
SHR3YDL212W YPR170W-BP0C5R9 85 aa1.9□□□□□ -2.11
SHR3YDL212W COQ1P18900 473 aa1.9□□□□□ -2.11
SHR3YDL212W DBF2P22204 572 aa1.9□□□□□ -2.11
SHR3YDL212W CBT1P36038 271 aaPredicted RBP1.9□□□□□ -2.11
SHR3YDL212W YNL194CP40169 301 aa1.9□□□□□ -2.11
SHR3YDL212W YIL001WP40560 513 aa1.9□□□□□ -2.11
SHR3YDL212W YRB1P41920 201 aaKnown RBP1.9□□□□□ -2.11
SHR3YDL212W PRM10P42946 383 aa1.9□□□□□ -2.11
SHR3YDL212W NUP57P48837 541 aa1.9□□□□□ -2.11
SHR3YDL212W MGA1P53050 456 aa1.9□□□□□ -2.11
SHR3YDL212W YGR219WP53307 113 aa1.9□□□□□ -2.11
SHR3YDL212W YNL010WP53981 241 aaKnown RBP1.9□□□□□ -2.11
SHR3YDL212W MRPS17Q03246 237 aaPredicted RBP1.9□□□□□ -2.11
SHR3YDL212W CDC8P00572 216 aa1.89□□□□□ -2.11
SHR3YDL212W RPL28P02406 149 aaKnown RBP1.89□□□□□ -2.11
SHR3YDL212W OAC1P32332 324 aa1.89□□□□□ -2.11
SHR3YDL212W RME1P32338 300 aaKnown RBP1.89□□□□□ -2.11
SHR3YDL212W PRX1P34227 261 aaKnown RBP1.89□□□□□ -2.11
SHR3YDL212W PHO88P38264 188 aaPredicted RBP1.89□□□□□ -2.11
SHR3YDL212W DOG2P38773 246 aa1.89□□□□□ -2.11
SHR3YDL212W YRB2P40517 327 aa1.89□□□□□ -2.11
SHR3YDL212W CIS3P47001 227 aa1.89□□□□□ -2.11
SHR3YDL212W CWC23P52868 283 aaPredicted RBP1.89□□□□□ -2.11
SHR3YDL212W YMD8Q03697 442 aa1.89□□□□□ -2.11
SHR3YDL212W LPP1Q04396 274 aa1.89□□□□□ -2.11
SHR3YDL212W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SHR3YDL212W GET4Q12125 312 aa1.89□□□□□ -2.11
SHR3YDL212W PSF1Q12488 208 aa1.89□□□□□ -2.11
SHR3YDL212W LSO2Q3E772 92 aaKnown RBP1.89□□□□□ -2.11
SHR3YDL212W YDR157WA0A023PZE8 133 aa1.88□□□□□ -2.11
SHR3YDL212W CDC7P06243 507 aa1.88□□□□□ -2.11
SHR3YDL212W FBA1P14540 359 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms