RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YIL059CP40520 121 aa2.49□□□□□ -2.01
RRP42YDL111C YJR141WP47172 347 aaPredicted RBP2.49□□□□□ -2.01
RRP42YDL111C MMS2P53152 137 aa2.49□□□□□ -2.01
RRP42YDL111C DIA1P54005 336 aa2.49□□□□□ -2.01
RRP42YDL111C YLR179CQ06252 201 aaKnown RBP2.49□□□□□ -2.01
RRP42YDL111C CLP1Q08685 445 aaPredicted RBP2.49□□□□□ -2.01
RRP42YDL111C GPM2Q12008 311 aa2.49□□□□□ -2.01
RRP42YDL111C SEC4P07560 215 aaKnown RBP2.48□□□□□ -2.01
RRP42YDL111C OAC1P32332 324 aa2.48□□□□□ -2.01
RRP42YDL111C SPS18P32572 300 aa2.48□□□□□ -2.01
RRP42YDL111C MSA2P36157 363 aa2.48□□□□□ -2.01
RRP42YDL111C SEC72P39742 193 aaKnown RBP2.48□□□□□ -2.01
RRP42YDL111C PFS2P42841 465 aaKnown RBP2.48□□□□□ -2.01
RRP42YDL111C RPA43P46669 326 aa2.48□□□□□ -2.01
RRP42YDL111C OST2P46964 130 aa2.48□□□□□ -2.01
RRP42YDL111C YJR056CP47115 236 aa2.48□□□□□ -2.01
RRP42YDL111C YMD8Q03697 442 aa2.48□□□□□ -2.01
RRP42YDL111C YET3Q07451 203 aa2.48□□□□□ -2.01
RRP42YDL111C AGC1Q12482 902 aa2.48□□□□□ -2.01
RRP42YDL111C YHR139C-AO13536 103 aa2.47□□□□□ -2.01
RRP42YDL111C RAD10P06838 210 aa2.47□□□□□ -2.01
RRP42YDL111C ADH3P07246 375 aaKnown RBP2.47□□□□□ -2.01
RRP42YDL111C DSF1P0CX08 502 aa2.47□□□□□ -2.01
RRP42YDL111C YNR073CP0CX09 502 aa2.47□□□□□ -2.01
RRP42YDL111C RAD51P25454 400 aa2.47□□□□□ -2.01
RRP42YDL111C YGP1P38616 354 aaKnown RBP2.47□□□□□ -2.01
RRP42YDL111C DOG2P38773 246 aa2.47□□□□□ -2.01
RRP42YDL111C DOG1P38774 246 aa2.47□□□□□ -2.01
RRP42YDL111C FIS1P40515 155 aa2.47□□□□□ -2.01
RRP42YDL111C YJL016WP47072 561 aa2.47□□□□□ -2.01
RRP42YDL111C RSM10Q03201 203 aa2.47□□□□□ -2.01
RRP42YDL111C YDR114CQ04597 100 aa2.47□□□□□ -2.01
RRP42YDL111C CDD1Q06549 142 aa2.47□□□□□ -2.01
RRP42YDL111C YNG1Q08465 219 aa2.47□□□□□ -2.01
RRP42YDL111C IES4Q08561 116 aa2.47□□□□□ -2.01
RRP42YDL111C NIP7Q08962 181 aaKnown RBP2.47□□□□□ -2.01
RRP42YDL111C BBP1Q12365 385 aa2.47□□□□□ -2.01
RRP42YDL111C CMC2Q3E7A4 109 aa2.47□□□□□ -2.01
RRP42YDL111C TCA17P32613 152 aa2.46□□□□□ -2.02
RRP42YDL111C VPS51P36116 164 aa2.46□□□□□ -2.02
RRP42YDL111C SHG1P38337 142 aa2.46□□□□□ -2.02
RRP42YDL111C ARC15P40518 154 aaRIP-Chip data2.46□□□□□ -2.02not detected
RRP42YDL111C GIM5Q04493 163 aa2.46□□□□□ -2.02
RRP42YDL111C MDM32Q12171 622 aa2.46□□□□□ -2.02
RRP42YDL111C RPS23AP0CX29 145 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C RPS23BP0CX30 145 aa2.45□□□□□ -2.02
RRP42YDL111C ARC19P33204 171 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C CAF4P36130 643 aa2.45□□□□□ -2.02
RRP42YDL111C ECM4P36156 370 aa2.45□□□□□ -2.02
RRP42YDL111C YBR063CP38083 404 aa2.45□□□□□ -2.02
RRP42YDL111C ECM33P38248 429 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C YAR068WP39564 161 aa2.45□□□□□ -2.02
RRP42YDL111C IRC22P40006 225 aa2.45□□□□□ -2.02
RRP42YDL111C TIF34P40217 347 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C ERG10P41338 398 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C LSM7P53905 115 aaKnown RBP2.45□□□□□ -2.02
RRP42YDL111C YOR268CQ08734 132 aa2.45□□□□□ -2.02
RRP42YDL111C Q0255P03881 472 aa2.44□□□□□ -2.02
RRP42YDL111C RPL25P04456 142 aaKnown RBP2.44□□□□□ -2.02
RRP42YDL111C FCY2P17064 533 aa2.44□□□□□ -2.02
RRP42YDL111C SNF6P18888 332 aa2.44□□□□□ -2.02
RRP42YDL111C RSA4P25382 515 aaKnown RBP2.44□□□□□ -2.02
RRP42YDL111C AGA2P32781 87 aa2.44□□□□□ -2.02
RRP42YDL111C FMT1P32785 401 aa2.44□□□□□ -2.02
RRP42YDL111C COG3P40094 801 aa2.44□□□□□ -2.02
RRP42YDL111C POG1P40473 351 aa2.44□□□□□ -2.02
RRP42YDL111C RTC4P53850 401 aa2.44□□□□□ -2.02
RRP42YDL111C YNL010WP53981 241 aaKnown RBP2.44□□□□□ -2.02
RRP42YDL111C PEX12Q04370 399 aa2.44□□□□□ -2.02
RRP42YDL111C LPP1Q04396 274 aa2.44□□□□□ -2.02
RRP42YDL111C CDC7P06243 507 aa2.43□□□□□ -2.02
RRP42YDL111C RPL35AP0CX84 120 aaKnown RBP2.43□□□□□ -2.02
RRP42YDL111C RPL35BP0CX85 120 aaKnown RBP2.43□□□□□ -2.02
RRP42YDL111C CCA1P21269 546 aa2.43□□□□□ -2.02
RRP42YDL111C MAG1P22134 296 aaKnown RBP2.43□□□□□ -2.02
RRP42YDL111C YHR125WP38831 101 aa2.43□□□□□ -2.02
RRP42YDL111C RMD6P39975 231 aa2.43□□□□□ -2.02
RRP42YDL111C YER188WP40103 239 aa2.43□□□□□ -2.02
RRP42YDL111C GON7P46984 123 aa2.43□□□□□ -2.02
RRP42YDL111C YGR026WP53217 278 aa2.43□□□□□ -2.02
RRP42YDL111C YGR050CP53231 118 aa2.43□□□□□ -2.02
RRP42YDL111C PET191Q02772 108 aa2.43□□□□□ -2.02
RRP42YDL111C ATG39Q06159 398 aa2.43□□□□□ -2.02
RRP42YDL111C FEX1Q08913 375 aa2.43□□□□□ -2.02
RRP42YDL111C FEX2Q08991 375 aa2.43□□□□□ -2.02
RRP42YDL111C SAS5Q99314 248 aa2.43□□□□□ -2.02
RRP42YDL111C MRS1P07266 363 aa2.42□□□□□ -2.02
RRP42YDL111C FBA1P14540 359 aaKnown RBP2.42□□□□□ -2.02
RRP42YDL111C SSU72P53538 206 aaPredicted RBP2.42□□□□□ -2.02
RRP42YDL111C COG5P53951 403 aa2.42□□□□□ -2.02
RRP42YDL111C FUS2Q05670 677 aa2.42□□□□□ -2.02
RRP42YDL111C USB1Q12208 290 aaKnown RBP2.42□□□□□ -2.02
RRP42YDL111C CCH1P50077 2039 aa2.42□□□□□ -2.02
RRP42YDL111C RPL9AP05738 191 aaKnown RBP2.41□□□□□ -2.02
RRP42YDL111C YPR170W-BP0C5R9 85 aa2.41□□□□□ -2.02
RRP42YDL111C DPM1P14020 267 aaKnown RBP2.41□□□□□ -2.02
RRP42YDL111C ATG22P25568 528 aa2.41□□□□□ -2.02
RRP42YDL111C YKR032WP36127 104 aa2.41□□□□□ -2.02
RRP42YDL111C POP4P38336 279 aa2.41□□□□□ -2.02
RRP42YDL111C HMF1P40037 129 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms