RNA–Protein interactions for RNA: YBR006W

UGA2, Transcript of Succinate semialdehyde dehydrogenase, yeast

Gene UGA2, Length 1,494 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA2	YBR006W	NGL2	Q03264	515 aa	Known RBP	4.24	□□□□□ -1.73
UGA2	YBR006W	YLR283W	Q05867	314 aa		4.24	□□□□□ -1.73
UGA2	YBR006W	RAF1	Q06891	181 aa		4.24	□□□□□ -1.73
UGA2	YBR006W	RDI1	Q12434	202 aa		4.24	□□□□□ -1.73
UGA2	YBR006W	PHO2	P07269	559 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	FRS1	P15624	595 aa	Known RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	STF2	P16965	84 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	ATG15	P25641	520 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	VMA5	P31412	392 aa	Known RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	MRPS5	P33759	307 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	FLO10	P36170	1169 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	VMA22	P38784	181 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	IDP2	P41939	412 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	LSM1	P47017	172 aa	Known RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	AVT4	P50944	713 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	NSA1	P53136	463 aa	Predicted RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	GIM3	P53900	129 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	RPL6A	Q02326	176 aa	Known RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	VBA1	Q04301	562 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	MRX9	Q07349	420 aa	Known RBP	4.23	□□□□□ -1.73
UGA2	YBR006W	YDL218W	Q07629	317 aa		4.23	□□□□□ -1.73
UGA2	YBR006W	HEM4	P06174	275 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	RFA3	P26755	122 aa	Known RBP	4.22	□□□□□ -1.73
UGA2	YBR006W	FMT1	P32785	401 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	YBL010C	P32788	280 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	MRPL27	P36526	146 aa	Predicted RBP	4.22	□□□□□ -1.73
UGA2	YBR006W	YND1	P40009	630 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	YER084W	P40057	128 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	XBP1	P40489	647 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	RSM27	P53305	110 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	RCE1	Q03530	315 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	YDR391C	Q04170	232 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	RFU1	Q08003	200 aa		4.22	□□□□□ -1.73
UGA2	YBR006W	USB1	Q12208	290 aa	Known RBP	4.22	□□□□□ -1.73
UGA2	YBR006W	AAC1	P04710	309 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	ARG80	P07249	177 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	HNM1	P19807	563 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	MRP17	P28778	131 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	DEG1	P31115	442 aa	Known RBP	4.21	□□□□□ -1.74
UGA2	YBR006W	VAM7	P32912	316 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	YKL063C	P35725	167 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	PCL7	P40186	285 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	MOB2	P43563	287 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	MRPL50	P53724	139 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	TIM44	Q01852	431 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	FIT3	Q08907	204 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	HUT1	Q12520	339 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	FOL3	Q12676	427 aa	Predicted RBP	4.21	□□□□□ -1.74
UGA2	YBR006W	PET20	Q99373	253 aa		4.21	□□□□□ -1.74
UGA2	YBR006W	PRP8	P33334	2413 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	CDC28	P00546	298 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	PUT1	P09368	476 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	ARO3	P14843	370 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	CPR4	P25334	318 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	YCR016W	P25617	290 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	PEX4	P29340	183 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	AGA2	P32781	87 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	REC114	P32841	428 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	MCH2	P36032	473 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	PAN3	P36102	679 aa	Predicted RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	ARC40	P38328	384 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	YER137C	P40083	148 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	GNA1	P43577	159 aa	Predicted RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	ORM1	P53224	222 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	OKP1	P53298	406 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	SMX3	P54999	86 aa	Predicted RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	YML018C	Q03730	393 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	SYM1	Q06563	197 aa		4.2	□□□□□ -1.74
UGA2	YBR006W	CDC39	P25655	2108 aa	Known RBP	4.2	□□□□□ -1.74
UGA2	YBR006W	YBR056W-A	I2HB52	66 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	PET122	P10355	254 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	CKS1	P20486	150 aa	Known RBP	4.19	□□□□□ -1.74
UGA2	YBR006W	SAG1	P20840	650 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	IFM1	P25038	676 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	ACB1	P31787	87 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	SEN34	P39707	275 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	FLX1	P40464	311 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	OST1	P41543	476 aa	Known RBP	4.19	□□□□□ -1.74
UGA2	YBR006W	GWT1	P47026	490 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	SSN8	P47821	323 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	SIP18	P50263	79 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	UFD1	P53044	361 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	YIP5	P53108	310 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	EOS1	P53938	366 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
UGA2	YBR006W	PLP1	Q04004	230 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	API2	Q04413	109 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	COA4	Q05809	96 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
UGA2	YBR006W	TRA1	P38811	3744 aa		4.19	□□□□□ -1.74
UGA2	YBR006W	RPL35A	P0CX84	120 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	RPL35B	P0CX85	120 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	TRR1	P29509	319 aa	Known RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	CLB6	P32943	380 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	POP8	P38208	133 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	FIG1	P38224	298 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	PTI1	P39927	425 aa	Predicted RBP	4.18	□□□□□ -1.74
UGA2	YBR006W	YIL077C	P40508	320 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YIL029C	P40538	142 aa		4.18	□□□□□ -1.74
UGA2	YBR006W	YGR210C	P42942	411 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms