RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YOR072WQ08486 104 aa-3.35□□□□□ -2.95
snR40snR40 RAD28Q12021 506 aa-3.35□□□□□ -2.95
snR40snR40 YCT1Q12235 531 aa-3.35□□□□□ -2.95
snR40snR40 JLP1Q12358 412 aa-3.35□□□□□ -2.95
snR40snR40 DUR1,2P32528 1835 aaKnown RBP-3.35□□□□□ -2.95
snR40snR40 YLR236CA0A023PZG4 107 aa-3.36□□□□□ -2.95
snR40snR40 FRS2P15625 503 aaKnown RBP-3.36□□□□□ -2.95
snR40snR40 CPR2P23285 205 aa-3.36□□□□□ -2.95
snR40snR40 MEK1P24719 497 aaPredicted RBP-3.36□□□□□ -2.95
snR40snR40 CLB3P24870 427 aa-3.36□□□□□ -2.95
snR40snR40 RBK1P25332 333 aa-3.36□□□□□ -2.95
snR40snR40 CAF4P36130 643 aa-3.36□□□□□ -2.95
snR40snR40 YAR068WP39564 161 aa-3.36□□□□□ -2.95
snR40snR40 UBC13P52490 153 aa-3.36□□□□□ -2.95
snR40snR40 YGL159WP53110 370 aa-3.36□□□□□ -2.95
snR40snR40 LOA1Q06508 300 aa-3.36□□□□□ -2.95
snR40snR40 YPR011CQ12251 326 aa-3.36□□□□□ -2.95
snR40snR40 YMR316C-AI2HB70 103 aa-3.37□□□□□ -2.95
snR40snR40 KIN28P06242 306 aa-3.37□□□□□ -2.95
snR40snR40 PDE2P06776 526 aa-3.37□□□□□ -2.95
snR40snR40 SNA3P14359 133 aa-3.37□□□□□ -2.95
snR40snR40 CAM1P29547 415 aaKnown RBP-3.37□□□□□ -2.95
snR40snR40 ATC1Q04005 294 aa-3.37□□□□□ -2.95
snR40snR40 CUE4Q04201 117 aaPredicted RBP-3.37□□□□□ -2.95
snR40snR40 SPE3Q12074 293 aaKnown RBP-3.37□□□□□ -2.95
snR40snR40 YAR023CD6VPM8 179 aa-3.38□□□□□ -2.95
snR40snR40 YLR462WO13556 202 aa-3.38□□□□□ -2.95
snR40snR40 MATALPHA2P0CY08 210 aa-3.38□□□□□ -2.95
snR40snR40 HMLALPHA2P0CY09 210 aa-3.38□□□□□ -2.95
snR40snR40 PHO85P17157 305 aa-3.38□□□□□ -2.95
snR40snR40 ADK2P26364 225 aa-3.38□□□□□ -2.95
snR40snR40 ASF2P32448 525 aaPredicted RBP-3.38□□□□□ -2.95
snR40snR40 MSA2P36157 363 aa-3.38□□□□□ -2.95
snR40snR40 YEL075CP39972 122 aa-3.38□□□□□ -2.95
snR40snR40 SNL1P40548 159 aa-3.38□□□□□ -2.95
snR40snR40 NIP7Q08962 181 aaKnown RBP-3.38□□□□□ -2.95
snR40snR40 YOR114WQ12219 294 aa-3.38□□□□□ -2.95
snR40snR40 AGP3P43548 558 aa-3.39□□□□□ -2.95
snR40snR40 ATG39Q06159 398 aa-3.39□□□□□ -2.95
snR40snR40 ERP4Q12450 207 aa-3.39□□□□□ -2.95
snR40snR40 ATG40Q99325 256 aa-3.39□□□□□ -2.95
snR40snR40 PAM17P36147 197 aa-3.4□□□□□ -2.95
snR40snR40 ECM4P36156 370 aa-3.4□□□□□ -2.95
snR40snR40 RXT2P38255 430 aa-3.4□□□□□ -2.95
snR40snR40 YSW1P38280 609 aa-3.4□□□□□ -2.95
snR40snR40 HIS2P38635 335 aa-3.4□□□□□ -2.95
snR40snR40 SWC4P53201 476 aa-3.4□□□□□ -2.95
snR40snR40 ALG11P53954 548 aaKnown RBP-3.4□□□□□ -2.95
snR40snR40 FAR8Q05040 523 aa-3.4□□□□□ -2.95
snR40snR40 SUA5P32579 426 aa-3.41□□□□□ -2.96
snR40snR40 UTP9P38882 575 aaKnown RBP-3.41□□□□□ -2.96
snR40snR40 PRM9P39551 298 aa-3.41□□□□□ -2.96
snR40snR40 YPL073CP40323 161 aa-3.41□□□□□ -2.96
snR40snR40 FIS1P40515 155 aa-3.41□□□□□ -2.96
snR40snR40 YHC3P47040 408 aa-3.41□□□□□ -2.96
snR40snR40 GTR2P53290 341 aa-3.41□□□□□ -2.96
snR40snR40 VPS60Q03390 229 aa-3.41□□□□□ -2.96
snR40snR40 DPP1Q05521 289 aa-3.41□□□□□ -2.96
snR40snR40 YLR179CQ06252 201 aaKnown RBP-3.41□□□□□ -2.96
snR40snR40 PEX27Q08580 376 aa-3.41□□□□□ -2.96
snR40snR40 CDC8P00572 216 aa-3.42□□□□□ -2.96
snR40snR40 ATP6P00854 259 aa-3.42□□□□□ -2.96
snR40snR40 YER034WP40022 185 aaKnown RBP-3.42□□□□□ -2.96
snR40snR40 YNL122CP53921 115 aaPredicted RBP-3.42□□□□□ -2.96
snR40snR40 ARO80Q04052 950 aa-3.42□□□□□ -2.96
snR40snR40 FSF1Q12029 327 aaKnown RBP-3.42□□□□□ -2.96
snR40snR40 MCP1Q12106 302 aa-3.42□□□□□ -2.96
snR40snR40 YOR342CQ12182 319 aa-3.42□□□□□ -2.96
snR40snR40 SRN2Q99176 213 aa-3.42□□□□□ -2.96
snR40snR40 MDN1Q12019 4910 aaKnown RBP-3.42□□□□□ -2.96
snR40snR40 TUS1Q06412 1307 aa-3.43□□□□□ -2.96
snR40snR40 PET494P07390 489 aaPredicted RBP-3.43□□□□□ -2.96
snR40snR40 YMR134WP40207 237 aa-3.43□□□□□ -2.96
snR40snR40 CDC40P40968 455 aaPredicted RBP-3.43□□□□□ -2.96
snR40snR40 SLX9P53251 210 aaPredicted RBP-3.43□□□□□ -2.96
snR40snR40 YPR174CQ06616 221 aaPredicted RBP-3.43□□□□□ -2.96
snR40snR40 YRF1-4O13559 1382 aa-3.43□□□□□ -2.96
snR40snR40 YCR051WP25631 222 aa-3.44□□□□□ -2.96
snR40snR40 PPA2P28239 310 aa-3.44□□□□□ -2.96
snR40snR40 ERG24P32462 438 aaKnown RBP-3.44□□□□□ -2.96
snR40snR40 UMP1P38293 148 aa-3.44□□□□□ -2.96
snR40snR40 YER189WP40104 122 aa-3.44□□□□□ -2.96
snR40snR40 PRE6P40303 254 aaKnown RBP-3.44□□□□□ -2.96
snR40snR40 ARF3P40994 183 aaRIP-Chip data-3.44□□□□□ -2.96not detected
snR40snR40 YGR016WP53209 190 aa-3.44□□□□□ -2.96
snR40snR40 YNL190WP53872 204 aa-3.44□□□□□ -2.96
snR40snR40 RRN5Q02983 363 aa-3.44□□□□□ -2.96
snR40snR40 MET17P06106 444 aa-3.45□□□□□ -2.96
snR40snR40 MSF1P08425 469 aa-3.45□□□□□ -2.96
snR40snR40 ACB1P31787 87 aa-3.45□□□□□ -2.96
snR40snR40 RIB7P33312 244 aa-3.45□□□□□ -2.96
snR40snR40 SHE2P36068 246 aaKnown RBP RIP-Chip data-3.45□□□□□ -2.96not detected
snR40snR40 PAN3P36102 679 aaPredicted RBP-3.45□□□□□ -2.96
snR40snR40 ATX1P38636 73 aa-3.45□□□□□ -2.96
snR40snR40 UAF30Q08747 228 aa-3.45□□□□□ -2.96
snR40snR40 HAP2P06774 265 aa-3.46□□□□□ -2.96
snR40snR40 YPK2P18961 677 aa-3.46□□□□□ -2.96
snR40snR40 MRPS28P21771 286 aa-3.46□□□□□ -2.96
snR40snR40 AUA1P32450 94 aa-3.46□□□□□ -2.96
snR40snR40 FIP1P45976 327 aa-3.46□□□□□ -2.96
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms