RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	NAT2	P37293	288 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	SDH8	P38345	138 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YER137C	P40083	148 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	ATF1	P40353	525 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YJL218W	P40892	196 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	OST1	P41543	476 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	EGT2	P42835	1041 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	PAM16	P42949	149 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	DOC1	P53068	250 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	TYW3	P53177	273 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YGR054W	P53235	642 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	SCW4	P53334	386 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	TEX1	P53851	422 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	YNL046W	P53956	172 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YMR279C	Q03263	540 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YDR248C	Q03786	193 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	DLT1	Q04216	342 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YMR130W	Q04223	302 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	SPR28	Q04921	423 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	YLR283W	Q05867	314 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	NMA1	Q06178	401 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	SSK1	Q07084	712 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	MRX9	Q07349	420 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	GAT3	Q07928	141 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	ORT1	Q12375	292 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	SUS1	Q6WNK7	96 aa		4.58	□□□□□ -1.68
CBC2	YPL178W	URA2	P07259	2214 aa	Known RBP	4.58	□□□□□ -1.68
CBC2	YPL178W	TDH2	P00358	332 aa	Known RBP	4.57	□□□□□ -1.68
CBC2	YPL178W	GAL1	P04385	528 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	SAG1	P20840	650 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	HXT2	P23585	541 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	YBL010C	P32788	280 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	TMA19	P35691	167 aa	Known RBP	4.57	□□□□□ -1.68
CBC2	YPL178W	YBR137W	P38276	179 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	SMB1	P40018	196 aa	Known RBP	4.57	□□□□□ -1.68
CBC2	YPL178W	ATG18	P43601	500 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	BNA6	P43619	295 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	YIP4	P53093	235 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	IMO32	P53219	342 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	CTF19	Q02732	369 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	YPL067C	Q02754	198 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	YMR254C	Q04838	102 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	COA4	Q05809	96 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	PIN3	Q06449	215 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	ASR1	Q06834	288 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	TIR4	Q12218	487 aa	Predicted RBP	4.57	□□□□□ -1.68
CBC2	YPL178W	YLR122C	Q12312	125 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	SNU23	Q12368	194 aa	Predicted RBP	4.57	□□□□□ -1.68
CBC2	YPL178W	Q0297	Q9ZZV8	51 aa		4.57	□□□□□ -1.68
CBC2	YPL178W	RPL25	P04456	142 aa	Known RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	RPS18A	P0CX55	146 aa	Known RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	RPS18B	P0CX56	146 aa	Predicted RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	CNE1	P27825	502 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	ERG24	P32462	438 aa	Known RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	TCA17	P32613	152 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	GPX2	P38143	162 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	UMP1	P38293	148 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	YND1	P40009	630 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	YER079W	P40052	210 aa	Known RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	YIL012W	P40551	113 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	GNA1	P43577	159 aa	Predicted RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	BNA2	P47125	453 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	ABM1	P47146	123 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	MRH4	P53166	561 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	CPR8	P53728	308 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	YPD1	Q07688	167 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	FCY22	Q12119	530 aa		4.56	□□□□□ -1.68
CBC2	YPL178W	YOR097C	Q12274	175 aa	Predicted RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	DCP1	Q12517	231 aa	Predicted RBP	4.56	□□□□□ -1.68
CBC2	YPL178W	YLR358C	O13565	187 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	CDC28	P00546	298 aa	Known RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	RFA3	P26755	122 aa	Known RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	HOM6	P31116	359 aa	Known RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	ZRT3	P34240	503 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
CBC2	YPL178W	SYS1	P41544	203 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	PHB2	P50085	310 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	TAF4	P50105	388 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	UFD1	P53044	361 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	NSA1	P53136	463 aa	Predicted RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	CGR1	P53188	120 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	SMM1	P53720	384 aa	Known RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	HNT1	Q04344	158 aa	Known RBP	4.55	□□□□□ -1.68
CBC2	YPL178W	FMP42	Q04991	504 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	HEM25	Q07534	307 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	RTR2	Q12378	196 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	EAF3	Q12432	401 aa		4.55	□□□□□ -1.68
CBC2	YPL178W	RPL39	P04650	51 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	GCD1	P09032	578 aa	Predicted RBP	4.54	□□□□□ -1.68
CBC2	YPL178W	APA2	P22108	325 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	PET18	P25362	215 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	YCR101C	P25607	182 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	MBA1	P38300	278 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	POP2	P39008	433 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	LSM4	P40070	187 aa	Known RBP	4.54	□□□□□ -1.68
CBC2	YPL178W	YIL077C	P40508	320 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	YIR020C	P40575	100 aa		4.54	□□□□□ -1.68
CBC2	YPL178W	GLR1	P41921	483 aa	Known RBP	4.54	□□□□□ -1.68
CBC2	YPL178W	NCA3	P46955	337 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms