RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C IRC18P47056 224 aa2.13□□□□□ -2.07
SGS1YMR190C LSM7P53905 115 aaKnown RBP2.13□□□□□ -2.07
SGS1YMR190C FIN1Q03898 291 aa2.13□□□□□ -2.07
SGS1YMR190C SNO4Q04902 237 aa2.13□□□□□ -2.07
SGS1YMR190C PAL1Q05518 499 aaKnown RBP2.13□□□□□ -2.07
SGS1YMR190C HSP33Q08914 237 aaKnown RBP2.13□□□□□ -2.07
SGS1YMR190C HSP32Q08992 237 aa2.13□□□□□ -2.07
SGS1YMR190C RLM1Q12224 676 aa2.13□□□□□ -2.07
SGS1YMR190C ATG31Q12421 196 aa2.13□□□□□ -2.07
SGS1YMR190C PUT1P09368 476 aa2.13□□□□□ -2.07
SGS1YMR190C AHC2P25649 128 aa2.13□□□□□ -2.07
SGS1YMR190C PAU24P38155 120 aa2.13□□□□□ -2.07
SGS1YMR190C YBR197CP38306 217 aa2.13□□□□□ -2.07
SGS1YMR190C FLO5P38894 1075 aa2.13□□□□□ -2.07
SGS1YMR190C YGR126WP53274 230 aa2.13□□□□□ -2.07
SGS1YMR190C INP1Q03694 420 aa2.13□□□□□ -2.07
SGS1YMR190C YDR391CQ04170 232 aa2.13□□□□□ -2.07
SGS1YMR190C MGR3Q04472 501 aa2.13□□□□□ -2.07
SGS1YMR190C ASR1Q06834 288 aa2.13□□□□□ -2.07
SGS1YMR190C SCM3Q12334 223 aa2.13□□□□□ -2.07
SGS1YMR190C YOR343CQ12484 108 aa2.13□□□□□ -2.07
SGS1YMR190C GCN1P33892 2672 aaKnown RBP2.13□□□□□ -2.07
SGS1YMR190C GPM1P00950 247 aaKnown RBP2.13□□□□□ -2.07
SGS1YMR190C KRR1P25586 316 aaPredicted RBP2.13□□□□□ -2.07
SGS1YMR190C PPG1P32838 368 aa2.13□□□□□ -2.07
SGS1YMR190C YKL187CP34231 750 aa2.13□□□□□ -2.07
SGS1YMR190C MRPL16P38064 232 aa2.13□□□□□ -2.07
SGS1YMR190C YHR035WP38769 630 aa2.13□□□□□ -2.07
SGS1YMR190C MPC2P38857 129 aa2.13□□□□□ -2.07
SGS1YMR190C LNP1P38878 278 aa2.13□□□□□ -2.07
SGS1YMR190C QDR1P40475 563 aa2.13□□□□□ -2.07
SGS1YMR190C PAM16P42949 149 aa2.13□□□□□ -2.07
SGS1YMR190C DML1Q03652 475 aa2.13□□□□□ -2.07
SGS1YMR190C HED1Q03937 162 aa2.13□□□□□ -2.07
SGS1YMR190C NNT1Q05874 261 aa2.13□□□□□ -2.07
SGS1YMR190C RPL3P14126 387 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C GCN3P14741 305 aa2.12□□□□□ -2.07
SGS1YMR190C DEG1P31115 442 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C UTP30P36144 274 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C OKP1P53298 406 aa2.12□□□□□ -2.07
SGS1YMR190C RRN9P53437 365 aa2.12□□□□□ -2.07
SGS1YMR190C TDA1Q03533 586 aa2.12□□□□□ -2.07
SGS1YMR190C YDR248CQ03786 193 aa2.12□□□□□ -2.07
SGS1YMR190C KEI1Q06346 221 aa2.12□□□□□ -2.07
SGS1YMR190C CHO1P08456 276 aa2.12□□□□□ -2.07
SGS1YMR190C SPS2P08459 502 aa2.12□□□□□ -2.07
SGS1YMR190C YBR063CP38083 404 aa2.12□□□□□ -2.07
SGS1YMR190C SDS24P38314 527 aa2.12□□□□□ -2.07
SGS1YMR190C CDC40P40968 455 aaPredicted RBP2.12□□□□□ -2.07
SGS1YMR190C BAP3P41815 604 aa2.12□□□□□ -2.07
SGS1YMR190C BNA2P47125 453 aa2.12□□□□□ -2.07
SGS1YMR190C AVT4P50944 713 aa2.12□□□□□ -2.07
SGS1YMR190C GIS2P53849 153 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SGS1YMR190C SNZ1Q03148 297 aa2.12□□□□□ -2.07
SGS1YMR190C YLR346CQ06139 101 aa2.12□□□□□ -2.07
SGS1YMR190C MCH4Q08268 501 aa2.12□□□□□ -2.07
SGS1YMR190C YOR283WQ12040 230 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C NPC2Q12408 173 aa2.12□□□□□ -2.07
SGS1YMR190C SUS1Q6WNK7 96 aa2.12□□□□□ -2.07
SGS1YMR190C FMP27Q06179 2628 aa2.12□□□□□ -2.07
SGS1YMR190C GLT1Q12680 2145 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C SIP1P32578 815 aa2.12□□□□□ -2.07
SGS1YMR190C AIM3P38266 947 aaKnown RBP2.12□□□□□ -2.07
SGS1YMR190C BMT5P40493 336 aa2.12□□□□□ -2.07
SGS1YMR190C SYG1P40528 902 aa2.12□□□□□ -2.07
SGS1YMR190C ATG18P43601 500 aa2.12□□□□□ -2.07
SGS1YMR190C SKO1Q02100 647 aa2.12□□□□□ -2.07
SGS1YMR190C SNX41Q04053 625 aa2.12□□□□□ -2.07
SGS1YMR190C YMR252CQ04814 134 aa2.12□□□□□ -2.07
SGS1YMR190C IRC23Q08416 157 aa2.12□□□□□ -2.07
SGS1YMR190C YOR385WQ08909 290 aa2.12□□□□□ -2.07
SGS1YMR190C SAG1P20840 650 aa2.11□□□□□ -2.07
SGS1YMR190C HOM6P31116 359 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C RPS20P38701 121 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C MIT1P40002 666 aa2.11□□□□□ -2.07
SGS1YMR190C HHT1P61830 136 aa2.11□□□□□ -2.07
SGS1YMR190C AIM36Q03798 255 aa2.11□□□□□ -2.07
SGS1YMR190C TSR2Q06672 205 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C TY1A-BLQ12266 440 aa2.11□□□□□ -2.07
SGS1YMR190C INP53Q12271 1107 aa2.11□□□□□ -2.07
SGS1YMR190C FOL3Q12676 427 aaPredicted RBP2.11□□□□□ -2.07
SGS1YMR190C MATALPHA1P0CY06 175 aa2.11□□□□□ -2.07
SGS1YMR190C HMLALPHA1P0CY07 175 aa2.11□□□□□ -2.07
SGS1YMR190C MRS3P10566 314 aa2.11□□□□□ -2.07
SGS1YMR190C DAT1P13483 248 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C TRR1P29509 319 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C MTH1P35198 433 aa2.11□□□□□ -2.07
SGS1YMR190C EGT2P42835 1041 aa2.11□□□□□ -2.07
SGS1YMR190C YFR054CP43622 192 aa2.11□□□□□ -2.07
SGS1YMR190C DOC1P53068 250 aa2.11□□□□□ -2.07
SGS1YMR190C ASI3P53983 676 aa2.11□□□□□ -2.07
SGS1YMR190C EKI1Q03764 534 aa2.11□□□□□ -2.07
SGS1YMR190C YMR130WQ04223 302 aa2.11□□□□□ -2.07
SGS1YMR190C UPS1Q05776 175 aa2.11□□□□□ -2.07
SGS1YMR190C YLR283WQ05867 314 aa2.11□□□□□ -2.07
SGS1YMR190C SEI1Q06058 285 aa2.11□□□□□ -2.07
SGS1YMR190C TIR4Q12218 487 aaPredicted RBP2.11□□□□□ -2.07
SGS1YMR190C BBP1Q12365 385 aa2.11□□□□□ -2.07
SGS1YMR190C RPL11AP0C0W9 174 aaKnown RBP2.11□□□□□ -2.07
SGS1YMR190C CKS1P20486 150 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms