RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C MET16P18408 261 aaPredicted RBP2.49□□□□□ -2.01
PML39YML107C CWP1P28319 239 aa2.49□□□□□ -2.01
PML39YML107C CSG2P35206 410 aa2.49□□□□□ -2.01
PML39YML107C ARN2P38724 620 aa2.49□□□□□ -2.01
PML39YML107C OTU1P43558 301 aa2.49□□□□□ -2.01
PML39YML107C YJL118WP47022 219 aa2.49□□□□□ -2.01
PML39YML107C PGA2P53903 129 aa2.49□□□□□ -2.01
PML39YML107C YPL039WQ03080 316 aa2.49□□□□□ -2.01
PML39YML107C SRL4Q03085 281 aa2.49□□□□□ -2.01
PML39YML107C SDC1Q03323 175 aa2.49□□□□□ -2.01
PML39YML107C GMC2Q06201 188 aa2.49□□□□□ -2.01
PML39YML107C CTS2Q06350 511 aa2.49□□□□□ -2.01
PML39YML107C MSF1P08425 469 aa2.48□□□□□ -2.01
PML39YML107C RPL4AP10664 362 aaKnown RBP2.48□□□□□ -2.01
PML39YML107C RPS5P26783 225 aaKnown RBP2.48□□□□□ -2.01
PML39YML107C RCY1P39531 840 aa2.48□□□□□ -2.01
PML39YML107C PRM9P39551 298 aa2.48□□□□□ -2.01
PML39YML107C OST3P48439 350 aa2.48□□□□□ -2.01
PML39YML107C RPL4BP49626 362 aaKnown RBP2.48□□□□□ -2.01
PML39YML107C PET117Q02771 107 aa2.48□□□□□ -2.01
PML39YML107C ATG31Q12421 196 aa2.48□□□□□ -2.01
PML39YML107C GEA1P47102 1408 aaPredicted RBP2.48□□□□□ -2.01
PML39YML107C RPL24AP04449 155 aaKnown RBP2.47□□□□□ -2.01
PML39YML107C MATALPHA1P0CY06 175 aa2.47□□□□□ -2.01
PML39YML107C HMLALPHA1P0CY07 175 aa2.47□□□□□ -2.01
PML39YML107C BMH2P34730 273 aaKnown RBP2.47□□□□□ -2.01
PML39YML107C HMT1P38074 348 aa2.47□□□□□ -2.01
PML39YML107C HEK2P38199 381 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01 RIP-Chip
PML39YML107C SER33P40510 469 aa2.47□□□□□ -2.01
PML39YML107C BNA6P43619 295 aa2.47□□□□□ -2.01
PML39YML107C HAM1P47119 197 aaKnown RBP2.47□□□□□ -2.01
PML39YML107C YJR141WP47172 347 aaPredicted RBP2.47□□□□□ -2.01
PML39YML107C NIF3P53081 288 aa2.47□□□□□ -2.01
PML39YML107C SLX9P53251 210 aaPredicted RBP2.47□□□□□ -2.01
PML39YML107C SSU72P53538 206 aaPredicted RBP2.47□□□□□ -2.01
PML39YML107C COX20Q04935 205 aa2.47□□□□□ -2.01
PML39YML107C YOR029WQ12243 111 aa2.47□□□□□ -2.01
PML39YML107C YRF1-3P0CX14 1859 aa2.47□□□□□ -2.01
PML39YML107C YRF1-7P0CX15 1859 aa2.47□□□□□ -2.01
PML39YML107C YRF1-6P53819 1859 aa2.47□□□□□ -2.01
PML39YML107C PET100P38958 111 aa2.46□□□□□ -2.02
PML39YML107C NPT1P39683 429 aaKnown RBP2.46□□□□□ -2.02
PML39YML107C COA1P40452 197 aa2.46□□□□□ -2.02
PML39YML107C FMC1P40491 155 aa2.46□□□□□ -2.02
PML39YML107C YRB2P40517 327 aa2.46□□□□□ -2.02
PML39YML107C YAR1P46683 200 aa2.46□□□□□ -2.02
PML39YML107C PIR5P46999 287 aa2.46□□□□□ -2.02
PML39YML107C CGR1P53188 120 aa2.46□□□□□ -2.02
PML39YML107C RTC4P53850 401 aa2.46□□□□□ -2.02
PML39YML107C RGM1Q00453 211 aa2.46□□□□□ -2.02
PML39YML107C YMR166CQ03829 368 aa2.46□□□□□ -2.02
PML39YML107C PEX10Q05568 337 aa2.46□□□□□ -2.02
PML39YML107C LOA1Q06508 300 aa2.46□□□□□ -2.02
PML39YML107C YBL112CQ3E7Y4 105 aa2.46□□□□□ -2.02
PML39YML107C AI5_BETAQ9ZZX0 354 aa2.46□□□□□ -2.02
PML39YML107C RAD9P14737 1309 aa2.45□□□□□ -2.02
PML39YML107C COX2P00410 251 aa2.45□□□□□ -2.02
PML39YML107C HIS1P00498 297 aaKnown RBP2.45□□□□□ -2.02
PML39YML107C YPK2P18961 677 aa2.45□□□□□ -2.02
PML39YML107C YCR016WP25617 290 aaKnown RBP2.45□□□□□ -2.02
PML39YML107C MED6P38782 295 aa2.45□□□□□ -2.02
PML39YML107C YHB1P39676 399 aaKnown RBP2.45□□□□□ -2.02
PML39YML107C RMR1P53060 241 aa2.45□□□□□ -2.02
PML39YML107C KAP114P53067 1004 aa2.45□□□□□ -2.02
PML39YML107C CDC14Q00684 551 aa2.45□□□□□ -2.02
PML39YML107C MYO5Q04439 1219 aaKnown RBP2.45□□□□□ -2.02
PML39YML107C MED4Q12343 284 aa2.45□□□□□ -2.02
PML39YML107C FIG2P25653 1609 aa2.44□□□□□ -2.02
PML39YML107C SFC1P33303 322 aa2.44□□□□□ -2.02
PML39YML107C TCD1P38756 429 aa2.44□□□□□ -2.02
PML39YML107C DSK2P48510 373 aa2.44□□□□□ -2.02
PML39YML107C EFM5P53200 248 aaKnown RBP2.44□□□□□ -2.02
PML39YML107C GRH1Q04410 372 aaKnown RBP2.44□□□□□ -2.02
PML39YML107C FUS2Q05670 677 aa2.44□□□□□ -2.02
PML39YML107C RDS3Q06835 107 aaPredicted RBP2.44□□□□□ -2.02
PML39YML107C SLD7Q08457 257 aa2.44□□□□□ -2.02
PML39YML107C AGC1Q12482 902 aa2.44□□□□□ -2.02
PML39YML107C RPP0P05317 312 aaKnown RBP2.43□□□□□ -2.02
PML39YML107C CDC33P07260 213 aaKnown RBP2.43□□□□□ -2.02
PML39YML107C MRP1P10662 321 aaKnown RBP2.43□□□□□ -2.02
PML39YML107C DPB2P24482 689 aaPredicted RBP2.43□□□□□ -2.02
PML39YML107C MAL32P38158 584 aa2.43□□□□□ -2.02
PML39YML107C BIG1P38813 335 aa2.43□□□□□ -2.02
PML39YML107C DDI1P40087 428 aa2.43□□□□□ -2.02
PML39YML107C YJR012CP47087 207 aa2.43□□□□□ -2.02
PML39YML107C NBP35P52920 328 aa2.43□□□□□ -2.02
PML39YML107C MAL12P53341 584 aa2.43□□□□□ -2.02
PML39YML107C NOP13P53883 403 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
PML39YML107C OST6Q03723 332 aa2.43□□□□□ -2.02
PML39YML107C FCF1Q05498 189 aaPredicted RBP2.43□□□□□ -2.02
PML39YML107C YLR283WQ05867 314 aa2.43□□□□□ -2.02
PML39YML107C ARR2Q06597 130 aa2.43□□□□□ -2.02
PML39YML107C GRE1Q08969 168 aa2.43□□□□□ -2.02
PML39YML107C SMT3Q12306 101 aaKnown RBP2.43□□□□□ -2.02
PML39YML107C SME1Q12330 94 aaPredicted RBP2.43□□□□□ -2.02
PML39YML107C PST1Q12355 444 aa2.43□□□□□ -2.02
PML39YML107C ROM2P51862 1356 aaKnown RBP2.43□□□□□ -2.02
PML39YML107C NUP192P47054 1683 aa2.43□□□□□ -2.02
PML39YML107C RHO1P06780 209 aaKnown RBP2.42□□□□□ -2.02
PML39YML107C RAD10P06838 210 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms