RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeast

Gene TFS1, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFS1	YLR178C	RPL24B	P24000	155 aa	Known RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	DEG1	P31115	442 aa	Known RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	DOA4	P32571	926 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	MNS1	P32906	549 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
TFS1	YLR178C	ARC40	P38328	384 aa	Known RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	LSM4	P40070	187 aa	Known RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	RIO2	P40160	425 aa	Known RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	EGT2	P42835	1041 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	ERJ5	P43613	295 aa	Predicted RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	BNA1	P47096	177 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	YIP5	P53108	310 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	YDC1	Q02896	317 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	GMC1	Q04399	608 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	MGR3	Q04472	501 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	HOF1	Q05080	669 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	YPR098C	Q06089	161 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	YTH1	Q06102	208 aa	Predicted RBP	4.68	□□□□□ -1.66
TFS1	YLR178C	GPN3	Q06543	272 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	FSH3	Q99369	266 aa		4.68	□□□□□ -1.66
TFS1	YLR178C	GCN4	P03069	281 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	ADK1	P07170	222 aa	Known RBP	4.67	□□□□□ -1.66
TFS1	YLR178C	COX9	P07255	59 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	SPS4	P09937	338 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	MSI1	P13712	422 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	ARO7	P32178	256 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	NAT2	P37293	288 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	SDS24	P38314	527 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	PAM16	P42949	149 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	AVT4	P50944	713 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	PMT5	P52867	743 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	SBH2	P52871	88 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	YKR005C	Q02203	525 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	YMR279C	Q03263	540 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	GRX3	Q03835	250 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	YLR283W	Q05867	314 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	ASR1	Q06834	288 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	SSK1	Q07084	712 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	RFU1	Q08003	200 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	FRE3	Q08905	711 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	ISA2	Q12425	185 aa		4.67	□□□□□ -1.66
TFS1	YLR178C	SIR2	P06700	562 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	PRE7	P23724	241 aa	Known RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	PAU2	P32612	120 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	SNC2	P33328	115 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	SFK1	P35735	353 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	TCM62	P38228	572 aa	Known RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	YIL012W	P40551	113 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	YAE1	P47118	141 aa	Predicted RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	LYS20	P48570	428 aa	Known RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	YGL204C	P53089	101 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	YGL159W	P53110	370 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	POP6	P53218	158 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	YDR248C	Q03786	193 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	NMA1	Q06178	401 aa	Known RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	LYS21	Q12122	440 aa	Known RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	YOR097C	Q12274	175 aa	Predicted RBP	4.66	□□□□□ -1.66
TFS1	YLR178C	Q0297	Q9ZZV8	51 aa		4.66	□□□□□ -1.66
TFS1	YLR178C	RPL39	P04650	51 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	SGA1	P08019	549 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	YBL010C	P32788	280 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	FMP23	P38231	175 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	YBR137W	P38276	179 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	OST1	P41543	476 aa	Known RBP	4.65	□□□□□ -1.67
TFS1	YLR178C	CIN2	P46670	268 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	YHC3	P47040	408 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	RNH201	P53942	307 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	YNL046W	P53956	172 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	SMX3	P54999	86 aa	Predicted RBP	4.65	□□□□□ -1.67
TFS1	YLR178C	CTF19	Q02732	369 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	YPL067C	Q02754	198 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	TDA1	Q03533	586 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	GAT3	Q07928	141 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	IRC25	Q07951	179 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	FCY22	Q12119	530 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	RKI1	Q12189	258 aa		4.65	□□□□□ -1.67
TFS1	YLR178C	TIR4	Q12218	487 aa	Predicted RBP	4.65	□□□□□ -1.67
TFS1	YLR178C	QCR7	P00128	127 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	TDH2	P00358	332 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	REP1	P03871	373 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	RPL25	P04456	142 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	RPS18A	P0CX55	146 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	RPS18B	P0CX56	146 aa	Predicted RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	MATALPHA1	P0CY06	175 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	HMLALPHA1	P0CY07	175 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	HXT2	P23585	541 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	TCA17	P32613	152 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	REC114	P32841	428 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	PPZ2	P33329	710 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	MRPL36	P36531	177 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	YND1	P40009	630 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	PCL6	P40038	420 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	YER079W	P40052	210 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	ATG18	P43601	500 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	RPS0B	P46654	252 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	DOC1	P53068	250 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	YIP4	P53093	235 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	MRH4	P53166	561 aa		4.64	□□□□□ -1.67
TFS1	YLR178C	SCW4	P53334	386 aa	Known RBP	4.64	□□□□□ -1.67
TFS1	YLR178C	HHT1	P61830	136 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms