RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C MRPL39P36533 70 aa1.19□□□□□ -2.22
AFB1YLR040C PRM10P42946 383 aa1.19□□□□□ -2.22
AFB1YLR040C SDO1Q07953 250 aaKnown RBP1.19□□□□□ -2.22
AFB1YLR040C RRS1Q08746 203 aaKnown RBP1.19□□□□□ -2.22
AFB1YLR040C YPL257WQ08974 193 aa1.19□□□□□ -2.22
AFB1YLR040C YOL162WP0CF19 215 aa1.18□□□□□ -2.22
AFB1YLR040C RTT105P40063 208 aa1.18□□□□□ -2.22
AFB1YLR040C USE1P53146 245 aa1.18□□□□□ -2.22
AFB1YLR040C ATG39Q06159 398 aa1.18□□□□□ -2.22
AFB1YLR040C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
AFB1YLR040C MSA1Q08471 629 aa1.18□□□□□ -2.22
AFB1YLR040C BTS1Q12051 335 aa1.18□□□□□ -2.22
AFB1YLR040C YCT1Q12235 531 aa1.18□□□□□ -2.22
AFB1YLR040C DCN1Q12395 269 aa1.18□□□□□ -2.22
AFB1YLR040C YPL229WQ99395 206 aa1.18□□□□□ -2.22
AFB1YLR040C SIR4P11978 1358 aa1.18□□□□□ -2.22
AFB1YLR040C MDH2P22133 377 aa1.17□□□□□ -2.22
AFB1YLR040C YPT52P36018 234 aaKnown RBP1.17□□□□□ -2.22
AFB1YLR040C FZO1P38297 855 aa1.17□□□□□ -2.22
AFB1YLR040C ERV15P38312 142 aa1.17□□□□□ -2.22
AFB1YLR040C DSE2P38844 325 aa1.17□□□□□ -2.22
AFB1YLR040C YHR180WP38868 163 aa1.17□□□□□ -2.22
AFB1YLR040C GLE2P40066 365 aa1.17□□□□□ -2.22
AFB1YLR040C FIS1P40515 155 aa1.17□□□□□ -2.22
AFB1YLR040C RPA43P46669 326 aa1.17□□□□□ -2.22
AFB1YLR040C ERG25P53045 309 aa1.17□□□□□ -2.22
AFB1YLR040C MPP6P53725 186 aaPredicted RBP1.17□□□□□ -2.22
AFB1YLR040C NEJ1Q06148 342 aa1.17□□□□□ -2.22
AFB1YLR040C ARR2Q06597 130 aa1.17□□□□□ -2.22
AFB1YLR040C HEM25Q07534 307 aa1.17□□□□□ -2.22
AFB1YLR040C UBR2Q07963 1872 aa1.17□□□□□ -2.22
AFB1YLR040C YHR139C-AO13536 103 aa1.16□□□□□ -2.22
AFB1YLR040C IPP1P00817 287 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C RPL9AP05738 191 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C GRX2P17695 143 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C RNA15P25299 296 aaPredicted RBP1.16□□□□□ -2.22
AFB1YLR040C RPT5P33297 434 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C YKR045CP36138 183 aa1.16□□□□□ -2.22
AFB1YLR040C YBR219CP38317 127 aa1.16□□□□□ -2.22
AFB1YLR040C BFR1P38934 470 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
AFB1YLR040C YKE4P40544 346 aa1.16□□□□□ -2.22
AFB1YLR040C RPL9BP51401 191 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C RMR1P53060 241 aa1.16□□□□□ -2.22
AFB1YLR040C KAP95Q06142 861 aaKnown RBP1.16□□□□□ -2.22
AFB1YLR040C YOR029WQ12243 111 aa1.16□□□□□ -2.22
AFB1YLR040C RRP36Q12481 300 aaPredicted RBP1.16□□□□□ -2.22
AFB1YLR040C CYR1P08678 2026 aaKnown RBP1.15□□□□□ -2.22
AFB1YLR040C MSW1P04803 379 aa1.15□□□□□ -2.23
AFB1YLR040C SNA3P14359 133 aa1.15□□□□□ -2.23
AFB1YLR040C ERD2P18414 219 aa1.15□□□□□ -2.23
AFB1YLR040C RIB7P33312 244 aa1.15□□□□□ -2.23
AFB1YLR040C YHR127WP38833 243 aaKnown RBP1.15□□□□□ -2.23
AFB1YLR040C JHD2P47156 728 aaPredicted RBP1.15□□□□□ -2.23
AFB1YLR040C RHO3Q00245 231 aaKnown RBP1.15□□□□□ -2.23
AFB1YLR040C SEI1Q06058 285 aa1.15□□□□□ -2.23
AFB1YLR040C CSI2Q08054 341 aa1.15□□□□□ -2.23
AFB1YLR040C CSM4Q08955 156 aa1.15□□□□□ -2.23
AFB1YLR040C NIP7Q08962 181 aaKnown RBP1.15□□□□□ -2.23
AFB1YLR040C MSH5Q12175 901 aa1.15□□□□□ -2.23
AFB1YLR040C YOL107WQ12239 342 aa1.15□□□□□ -2.23
AFB1YLR040C HTL1Q9URQ5 78 aa1.15□□□□□ -2.23
AFB1YLR040C TCP1P12612 559 aaKnown RBP1.14□□□□□ -2.23
AFB1YLR040C YKL075CP36083 450 aa1.14□□□□□ -2.23
AFB1YLR040C RPF1P38805 295 aaKnown RBP1.14□□□□□ -2.23
AFB1YLR040C VTC1P40046 129 aaRIP-Chip data1.14□□□□□ -2.23not detected
AFB1YLR040C GPI8P49018 411 aa1.14□□□□□ -2.23
AFB1YLR040C YNR062CP53748 327 aa1.14□□□□□ -2.23
AFB1YLR040C NUP49Q02199 472 aa1.14□□□□□ -2.23
AFB1YLR040C SNU23Q12368 194 aaPredicted RBP1.14□□□□□ -2.23
AFB1YLR040C ECM33P38248 429 aaKnown RBP1.13□□□□□ -2.23
AFB1YLR040C AGE2P40529 298 aa1.13□□□□□ -2.23
AFB1YLR040C YIL001WP40560 513 aa1.13□□□□□ -2.23
AFB1YLR040C CAT5P41735 233 aa1.13□□□□□ -2.23
AFB1YLR040C YJR079WP47126 109 aa1.13□□□□□ -2.23
AFB1YLR040C RSR1P13856 272 aa1.12□□□□□ -2.23
AFB1YLR040C FCY2P17064 533 aa1.12□□□□□ -2.23
AFB1YLR040C PET9P18239 318 aaKnown RBP1.12□□□□□ -2.23
AFB1YLR040C YGL010WP25338 174 aa1.12□□□□□ -2.23
AFB1YLR040C YBR220CP38318 560 aa1.12□□□□□ -2.23
AFB1YLR040C AVT2P39981 480 aa1.12□□□□□ -2.23
AFB1YLR040C BUD25P85052 153 aa1.12□□□□□ -2.23
AFB1YLR040C SML1Q04964 104 aa1.12□□□□□ -2.23
AFB1YLR040C USB1Q12208 290 aaKnown RBP1.12□□□□□ -2.23
AFB1YLR040C YLR126CQ12288 251 aa1.12□□□□□ -2.23
AFB1YLR040C RPL2AP0CX45 254 aaKnown RBP1.11□□□□□ -2.23
AFB1YLR040C RPL2BP0CX46 254 aaKnown RBP1.11□□□□□ -2.23
AFB1YLR040C YAR068WP39564 161 aa1.11□□□□□ -2.23
AFB1YLR040C YJR056CP47115 236 aa1.11□□□□□ -2.23
AFB1YLR040C HOC1P47124 396 aa1.11□□□□□ -2.23
AFB1YLR040C TOS8P53147 276 aa1.11□□□□□ -2.23
AFB1YLR040C YLR162WQ06235 118 aa1.11□□□□□ -2.23
AFB1YLR040C RRT8Q08219 342 aa1.11□□□□□ -2.23
AFB1YLR040C YOR020W-AQ3E824 90 aa1.11□□□□□ -2.23
AFB1YLR040C YBR063CP38083 404 aa1.1□□□□□ -2.23
AFB1YLR040C SVP26P38869 228 aa1.1□□□□□ -2.23
AFB1YLR040C TPO4Q12256 659 aa1.1□□□□□ -2.23
AFB1YLR040C ATG31Q12421 196 aa1.1□□□□□ -2.23
AFB1YLR040C YMR144WP40214 342 aaKnown RBP1.09□□□□□ -2.23
AFB1YLR040C HAM1P47119 197 aaKnown RBP1.09□□□□□ -2.23
AFB1YLR040C YNL134CP53912 376 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 132 ms