RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	ABM1	P47146	123 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	CPD1	P53314	239 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	NCE101	Q02820	53 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	MIX14	Q04341	121 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	API2	Q04413	109 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	RRG7	Q08774	242 aa	Predicted RBP	5.44	□□□□□ -1.54
TIF1	YKR059W	GRE1	Q08969	168 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	YCR024C-B	Q3E7Z8	88 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	MET2	P08465	486 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YER190C-B	P0CX94	160 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YEL077W-A	P0CX95	160 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YGR296C-B	P0CX96	160 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YPL283W-B	P0CX97	160 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YPR204C-A	P0CX98	160 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	KSS1	P14681	368 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	RPO26	P20435	155 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YCR022C	P25620	114 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	RPL16B	P26785	198 aa	Known RBP	5.43	□□□□□ -1.54
TIF1	YKR059W	SSO1	P32867	290 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	MIX23	P38162	196 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YRB2	P40517	327 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YCH1	P42937	148 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	YFL067W	P43537	175 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	FMP32	P43557	207 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	VPS60	Q03390	229 aa		5.43	□□□□□ -1.54
TIF1	YKR059W	UTP23	Q12339	254 aa	Known RBP	5.43	□□□□□ -1.54
TIF1	YKR059W	LSM4	P40070	187 aa	Known RBP	5.42	□□□□□ -1.54
TIF1	YKR059W	DDI1	P40087	428 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	AYR1	P40471	297 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	MRM2	P53123	320 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	CDH1	P53197	566 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	SWP1	Q02795	286 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	SDC1	Q03323	175 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	OST6	Q03723	332 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	YMR226C	Q05016	267 aa	Known RBP	5.42	□□□□□ -1.54
TIF1	YKR059W	HMS1	Q12398	434 aa		5.42	□□□□□ -1.54
TIF1	YKR059W	MATALPHA1	P0CY06	175 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	HMLALPHA1	P0CY07	175 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	SPS100	P13130	326 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	EHD3	P28817	500 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	HSP150	P32478	413 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	MTC4	P38335	694 aa	Known RBP	5.41	□□□□□ -1.54
TIF1	YKR059W	PTH1	P38876	190 aa	Known RBP	5.41	□□□□□ -1.54
TIF1	YKR059W	NUP116	Q02630	1113 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	TVP15	Q03860	143 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	SNX41	Q04053	625 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	FMP42	Q04991	504 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	MSH5	Q12175	901 aa		5.41	□□□□□ -1.54
TIF1	YKR059W	HEM4	P06174	275 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	RPL31A	P0C2H8	113 aa	Known RBP	5.4	□□□□□ -1.54
TIF1	YKR059W	ZRC1	P20107	442 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	NSG1	P38837	291 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	AIM2	P39721	246 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	AVT7	P40501	490 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	REE1	P40893	198 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	HAC1	P41546	238 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	LSG1	P53145	640 aa	Known RBP	5.4	□□□□□ -1.54
TIF1	YKR059W	RSA1	Q08932	381 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	TFC7	Q12415	435 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	Q0297	Q9ZZV8	51 aa		5.4	□□□□□ -1.54
TIF1	YKR059W	CPR1	P14832	162 aa	Known RBP	5.39	□□□□□ -1.55
TIF1	YKR059W	AGA1	P32323	725 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	ASF2	P32448	525 aa	Predicted RBP	5.39	□□□□□ -1.55
TIF1	YKR059W	MRPL39	P36533	70 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	AVT5	P38176	459 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	PRS3	P38689	320 aa	Known RBP	5.39	□□□□□ -1.55
TIF1	YKR059W	AST2	P39945	430 aa	Known RBP	5.39	□□□□□ -1.55
TIF1	YKR059W	THO1	P40040	218 aa	Known RBP	5.39	□□□□□ -1.55
TIF1	YKR059W	SLM1	P40485	686 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	LCB3	P47013	409 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	MTQ1	P53944	314 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	YDR476C	Q03362	224 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	RIM13	Q03792	727 aa		5.39	□□□□□ -1.55
TIF1	YKR059W	IES6	P32617	166 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	KTI12	P34253	313 aa	Known RBP	5.38	□□□□□ -1.55
TIF1	YKR059W	RFC4	P40339	323 aa	Known RBP	5.38	□□□□□ -1.55
TIF1	YKR059W	NCA3	P46955	337 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	PAC10	P48363	199 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	MST27	P53176	234 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	YPL039W	Q03080	316 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	CTR3	Q06686	241 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	RAF1	Q06891	181 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	DTD1	Q07648	150 aa	Known RBP	5.38	□□□□□ -1.55
TIF1	YKR059W	YDL109C	Q12103	647 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	YOR214C	Q12282	236 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	JLP1	Q12358	412 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	SAS5	Q99314	248 aa		5.38	□□□□□ -1.55
TIF1	YKR059W	URA2	P07259	2214 aa	Known RBP	5.38	□□□□□ -1.55
TIF1	YKR059W	RAS2	P01120	322 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	STE18	P18852	110 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	RNA15	P25299	296 aa	Predicted RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	INO2	P26798	304 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	VMA6	P32366	345 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	ARC19	P33204	171 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	PRE6	P40303	254 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	GAB1	P41733	394 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	GDS1	P41913	522 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	WWM1	P43582	211 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	ERP1	Q05359	219 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	YDL114W	Q07530	308 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms