RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TDA1Q03533 586 aa8.45□□□□□ -1.06
YSR3YKR053C CAC2Q04199 468 aa8.45□□□□□ -1.06
YSR3YKR053C YMR317WQ04893 1140 aa8.45□□□□□ -1.06
YSR3YKR053C YOR029WQ12243 111 aa8.45□□□□□ -1.06
YSR3YKR053C FUR4P05316 633 aaKnown RBP8.44□□□□□ -1.06
YSR3YKR053C YDR179W-AQ03983 463 aa8.44□□□□□ -1.06
YSR3YKR053C UTP15Q04305 513 aaKnown RBP8.44□□□□□ -1.06
YSR3YKR053C UPS1Q05776 175 aa8.44□□□□□ -1.06
YSR3YKR053C LIP2Q06005 328 aa8.44□□□□□ -1.06
YSR3YKR053C NKP1Q12493 238 aa8.44□□□□□ -1.06
YSR3YKR053C ARO4P32449 370 aaKnown RBP8.43□□□□□ -1.06
YSR3YKR053C ISC10P32645 267 aa8.43□□□□□ -1.06
YSR3YKR053C PRS2P38620 318 aaKnown RBP8.43□□□□□ -1.06
YSR3YKR053C SYS1P41544 203 aa8.43□□□□□ -1.06
YSR3YKR053C MID1P41821 548 aa8.43□□□□□ -1.06
YSR3YKR053C GNA1P43577 159 aaPredicted RBP8.43□□□□□ -1.06
YSR3YKR053C CTF19Q02732 369 aa8.43□□□□□ -1.06
YSR3YKR053C YMR130WQ04223 302 aa8.43□□□□□ -1.06
YSR3YKR053C REP2P03872 296 aa8.42□□□□□ -1.06
YSR3YKR053C YCR101CP25607 182 aa8.42□□□□□ -1.06
YSR3YKR053C YKL063CP35725 167 aa8.42□□□□□ -1.06
YSR3YKR053C GPX2P38143 162 aa8.42□□□□□ -1.06
YSR3YKR053C PIR5P46999 287 aa8.42□□□□□ -1.06
YSR3YKR053C ECM18Q04623 453 aa8.42□□□□□ -1.06
YSR3YKR053C WHI5Q12416 295 aa8.42□□□□□ -1.06
YSR3YKR053C RPS18AP0CX55 146 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C RPS18BP0CX56 146 aaPredicted RBP8.41□□□□□ -1.06
YSR3YKR053C PET122P10355 254 aa8.41□□□□□ -1.06
YSR3YKR053C RFA3P26755 122 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C CCS1P40202 249 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C ATG18P43601 500 aa8.41□□□□□ -1.06
YSR3YKR053C GPI14P47088 403 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C SKP1P52286 194 aa8.41□□□□□ -1.06
YSR3YKR053C HNT1Q04344 158 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C MRPL35Q06678 367 aa8.41□□□□□ -1.06
YSR3YKR053C AIR2Q12476 344 aaKnown RBP8.41□□□□□ -1.06
YSR3YKR053C GDH1P07262 454 aaKnown RBP8.4□□□□□ -1.06
YSR3YKR053C ACH1P32316 526 aa8.4□□□□□ -1.06
YSR3YKR053C YBL010CP32788 280 aa8.4□□□□□ -1.06
YSR3YKR053C SWD2P36104 329 aaPredicted RBP8.4□□□□□ -1.06
YSR3YKR053C BXI1P48558 297 aa8.4□□□□□ -1.06
YSR3YKR053C ARR2Q06597 130 aa8.4□□□□□ -1.06
YSR3YKR053C ATG41Q12048 136 aa8.4□□□□□ -1.06
YSR3YKR053C ATG40Q99325 256 aa8.4□□□□□ -1.06
YSR3YKR053C RPS31P05759 152 aaKnown RBP8.39□□□□□ -1.07
YSR3YKR053C CHO1P08456 276 aa8.39□□□□□ -1.07
YSR3YKR053C MTC7P32633 139 aa8.39□□□□□ -1.07
YSR3YKR053C GWT1P47026 490 aa8.39□□□□□ -1.07
YSR3YKR053C OKP1P53298 406 aa8.39□□□□□ -1.07
YSR3YKR053C WSC2P53832 503 aa8.39□□□□□ -1.07
YSR3YKR053C DUG3P53871 357 aa8.39□□□□□ -1.07
YSR3YKR053C APJ1P53940 528 aa8.39□□□□□ -1.07
YSR3YKR053C BUD25P85052 153 aa8.39□□□□□ -1.07
YSR3YKR053C MGR3Q04472 501 aa8.39□□□□□ -1.07
YSR3YKR053C ATP10P18496 279 aa8.38□□□□□ -1.07
YSR3YKR053C SOR1P35497 357 aaKnown RBP8.38□□□□□ -1.07
YSR3YKR053C AIM46P38885 310 aa8.38□□□□□ -1.07
YSR3YKR053C JLP2P40206 208 aa8.38□□□□□ -1.07
YSR3YKR053C CPR8P53728 308 aa8.38□□□□□ -1.07
YSR3YKR053C ADH6Q04894 360 aaKnown RBP8.38□□□□□ -1.07
YSR3YKR053C SOR2Q07786 357 aa8.38□□□□□ -1.07
YSR3YKR053C RFM1Q12192 310 aa8.38□□□□□ -1.07
YSR3YKR053C SUS1Q6WNK7 96 aa8.38□□□□□ -1.07
YSR3YKR053C VAM7P32912 316 aa8.37□□□□□ -1.07
YSR3YKR053C PAC2P39937 518 aa8.37□□□□□ -1.07
YSR3YKR053C PIC2P40035 300 aa8.37□□□□□ -1.07
YSR3YKR053C HNT2P49775 206 aa8.37□□□□□ -1.07
YSR3YKR053C YGL114WP53134 725 aa8.37□□□□□ -1.07
YSR3YKR053C VHT1P53241 593 aa8.37□□□□□ -1.07
YSR3YKR053C MSA1Q08471 629 aa8.37□□□□□ -1.07
YSR3YKR053C VAM3Q12241 283 aa8.37□□□□□ -1.07
YSR3YKR053C ODC2Q99297 307 aa8.37□□□□□ -1.07
YSR3YKR053C ATG22P25568 528 aa8.36□□□□□ -1.07
YSR3YKR053C HOM6P31116 359 aaKnown RBP8.36□□□□□ -1.07
YSR3YKR053C VMA5P31412 392 aaKnown RBP8.36□□□□□ -1.07
YSR3YKR053C CPR5P35176 225 aa8.36□□□□□ -1.07
YSR3YKR053C ALG14P38242 237 aa8.36□□□□□ -1.07
YSR3YKR053C RPL21AQ02753 160 aaKnown RBP8.36□□□□□ -1.07
YSR3YKR053C SRL4Q03085 281 aa8.36□□□□□ -1.07
YSR3YKR053C MSH5Q12175 901 aa8.36□□□□□ -1.07
YSR3YKR053C BBP1Q12365 385 aa8.36□□□□□ -1.07
YSR3YKR053C RPL21BQ12672 160 aaKnown RBP8.36□□□□□ -1.07
YSR3YKR053C URA6P15700 204 aa8.35□□□□□ -1.07
YSR3YKR053C PRE4P30657 266 aa8.35□□□□□ -1.07
YSR3YKR053C NTC20P38302 140 aaPredicted RBP8.35□□□□□ -1.07
YSR3YKR053C YIL060WP40519 144 aa8.35□□□□□ -1.07
YSR3YKR053C BNA1P47096 177 aa8.35□□□□□ -1.07
YSR3YKR053C TTI2P47168 421 aa8.35□□□□□ -1.07
YSR3YKR053C FMP48P53233 369 aa8.35□□□□□ -1.07
YSR3YKR053C YGR054WP53235 642 aaKnown RBP8.35□□□□□ -1.07
YSR3YKR053C HSK3P69852 69 aa8.35□□□□□ -1.07
YSR3YKR053C YPL108WQ02872 168 aaPredicted RBP8.35□□□□□ -1.07
YSR3YKR053C FMP42Q04991 504 aa8.35□□□□□ -1.07
YSR3YKR053C ERG3P32353 365 aa8.34□□□□□ -1.07
YSR3YKR053C MBA1P38300 278 aa8.34□□□□□ -1.07
YSR3YKR053C INP53Q12271 1107 aa8.34□□□□□ -1.07
YSR3YKR053C CDC34P14682 295 aa8.33□□□□□ -1.08
YSR3YKR053C RFA1P22336 621 aaKnown RBP8.33□□□□□ -1.08
YSR3YKR053C IFM1P25038 676 aa8.33□□□□□ -1.08
YSR3YKR053C OCH1P31755 480 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms