RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YMR130WQ04223 302 aa9.76□□□□□ -0.85
YKR040CYKR040C MRPL35Q06678 367 aa9.76□□□□□ -0.85
YKR040CYKR040C ATG41Q12048 136 aa9.76□□□□□ -0.85
YKR040CYKR040C YDL009CQ12210 107 aa9.76□□□□□ -0.85
YKR040CYKR040C SUS1Q6WNK7 96 aa9.76□□□□□ -0.85
YKR040CYKR040C IES6P32617 166 aa9.75□□□□□ -0.85
YKR040CYKR040C GNA1P43577 159 aaPredicted RBP9.75□□□□□ -0.85
YKR040CYKR040C BXI1P48558 297 aa9.75□□□□□ -0.85
YKR040CYKR040C ARG5,6Q01217 863 aa9.75□□□□□ -0.85
YKR040CYKR040C UTP15Q04305 513 aaKnown RBP9.75□□□□□ -0.85
YKR040CYKR040C LIP2Q06005 328 aa9.75□□□□□ -0.85
YKR040CYKR040C IES3Q12345 250 aa9.75□□□□□ -0.85
YKR040CYKR040C RPL15AP05748 204 aaKnown RBP9.74□□□□□ -0.85
YKR040CYKR040C HOM6P31116 359 aaKnown RBP9.74□□□□□ -0.85
YKR040CYKR040C VAM7P32912 316 aa9.74□□□□□ -0.85
YKR040CYKR040C MID1P41821 548 aa9.74□□□□□ -0.85
YKR040CYKR040C RPS0BP46654 252 aaKnown RBP9.74□□□□□ -0.85
YKR040CYKR040C MRX5P47007 382 aa9.74□□□□□ -0.85
YKR040CYKR040C RPL15BP54780 204 aaPredicted RBP9.74□□□□□ -0.85
YKR040CYKR040C MCM21Q06675 368 aa9.74□□□□□ -0.85
YKR040CYKR040C PEX27Q08580 376 aa9.74□□□□□ -0.85
YKR040CYKR040C YOR029WQ12243 111 aa9.74□□□□□ -0.85
YKR040CYKR040C WHI5Q12416 295 aa9.74□□□□□ -0.85
YKR040CYKR040C DCP1Q12517 231 aaPredicted RBP9.74□□□□□ -0.85
YKR040CYKR040C ODC2Q99297 307 aa9.74□□□□□ -0.85
YKR040CYKR040C YER145C-AA0A023PYF4 145 aa9.73□□□□□ -0.85
YKR040CYKR040C CCW14O13547 238 aa9.73□□□□□ -0.85
YKR040CYKR040C VMA3P25515 160 aa9.73□□□□□ -0.85
YKR040CYKR040C YCR101CP25607 182 aa9.73□□□□□ -0.85
YKR040CYKR040C PRE4P30657 266 aa9.73□□□□□ -0.85
YKR040CYKR040C YIL060WP40519 144 aa9.73□□□□□ -0.85
YKR040CYKR040C GZF3P42944 551 aaKnown RBP9.73□□□□□ -0.85
YKR040CYKR040C XPT1P47165 209 aa9.73□□□□□ -0.85
YKR040CYKR040C VHT1P53241 593 aa9.73□□□□□ -0.85
YKR040CYKR040C HNT1Q04344 158 aaKnown RBP9.73□□□□□ -0.85
YKR040CYKR040C RIM9Q04734 239 aa9.73□□□□□ -0.85
YKR040CYKR040C FMP42Q04991 504 aa9.73□□□□□ -0.85
YKR040CYKR040C UPS1Q05776 175 aa9.73□□□□□ -0.85
YKR040CYKR040C PRP11Q07350 266 aaPredicted RBP9.73□□□□□ -0.85
YKR040CYKR040C PET122P10355 254 aa9.72□□□□□ -0.85
YKR040CYKR040C RFA3P26755 122 aaKnown RBP9.72□□□□□ -0.85
YKR040CYKR040C PEX4P29340 183 aa9.72□□□□□ -0.85
YKR040CYKR040C VMA5P31412 392 aaKnown RBP9.72□□□□□ -0.85
YKR040CYKR040C PRS2P38620 318 aaKnown RBP9.72□□□□□ -0.85
YKR040CYKR040C AIM46P38885 310 aa9.72□□□□□ -0.85
YKR040CYKR040C PIR5P46999 287 aa9.72□□□□□ -0.85
YKR040CYKR040C MSH5Q12175 901 aa9.72□□□□□ -0.85
YKR040CYKR040C RPS31P05759 152 aaKnown RBP9.71□□□□□ -0.86
YKR040CYKR040C ZUO1P32527 433 aaKnown RBP9.71□□□□□ -0.86
YKR040CYKR040C TCA17P32613 152 aa9.71□□□□□ -0.86
YKR040CYKR040C CCS1P40202 249 aaKnown RBP9.71□□□□□ -0.86
YKR040CYKR040C SKP1P52286 194 aa9.71□□□□□ -0.86
YKR040CYKR040C FMP48P53233 369 aa9.71□□□□□ -0.86
YKR040CYKR040C ATG40Q99325 256 aa9.71□□□□□ -0.86
YKR040CYKR040C CDC34P14682 295 aa9.7□□□□□ -0.86
YKR040CYKR040C TAL1P15019 335 aaKnown RBP9.7□□□□□ -0.86
YKR040CYKR040C DPB2P24482 689 aaPredicted RBP9.7□□□□□ -0.86
YKR040CYKR040C ISC10P32645 267 aa9.7□□□□□ -0.86
YKR040CYKR040C YER188WP40103 239 aa9.7□□□□□ -0.86
YKR040CYKR040C GWT1P47026 490 aa9.7□□□□□ -0.86
YKR040CYKR040C SUT1P53032 299 aaKnown RBP9.7□□□□□ -0.86
YKR040CYKR040C ERV29P53337 310 aa9.7□□□□□ -0.86
YKR040CYKR040C YMR317WQ04893 1140 aa9.7□□□□□ -0.86
YKR040CYKR040C RFM1Q12192 310 aa9.7□□□□□ -0.86
YKR040CYKR040C INP53Q12271 1107 aa9.7□□□□□ -0.86
YKR040CYKR040C URA6P15700 204 aa9.69□□□□□ -0.86
YKR040CYKR040C YGR042WP53227 271 aa9.69□□□□□ -0.86
YKR040CYKR040C OKP1P53298 406 aa9.69□□□□□ -0.86
YKR040CYKR040C APJ1P53940 528 aa9.69□□□□□ -0.86
YKR040CYKR040C CHO1P08456 276 aa9.68□□□□□ -0.86
YKR040CYKR040C ATP10P18496 279 aa9.68□□□□□ -0.86
YKR040CYKR040C UTP11P34247 250 aaPredicted RBP9.68□□□□□ -0.86
YKR040CYKR040C MBA1P38300 278 aa9.68□□□□□ -0.86
YKR040CYKR040C HTD2P38790 280 aaKnown RBP9.68□□□□□ -0.86
YKR040CYKR040C WSC2P53832 503 aa9.68□□□□□ -0.86
YKR040CYKR040C SRL4Q03085 281 aa9.68□□□□□ -0.86
YKR040CYKR040C YOR283WQ12040 230 aaKnown RBP9.68□□□□□ -0.86
YKR040CYKR040C GDH1P07262 454 aaKnown RBP9.67□□□□□ -0.86
YKR040CYKR040C RFA1P22336 621 aaKnown RBP9.67□□□□□ -0.86
YKR040CYKR040C ERG3P32353 365 aa9.67□□□□□ -0.86
YKR040CYKR040C SWD3P38123 315 aa9.67□□□□□ -0.86
YKR040CYKR040C HNT2P49775 206 aa9.67□□□□□ -0.86
YKR040CYKR040C ECM18Q04623 453 aa9.67□□□□□ -0.86
YKR040CYKR040C VAM3Q12241 283 aa9.67□□□□□ -0.86
YKR040CYKR040C YLL053CP0CD98 152 aa9.66□□□□□ -0.86
YKR040CYKR040C FIG1P38224 298 aa9.66□□□□□ -0.86
YKR040CYKR040C NTC20P38302 140 aaPredicted RBP9.66□□□□□ -0.86
YKR040CYKR040C YHK8P38776 514 aa9.66□□□□□ -0.86
YKR040CYKR040C AIR1P40507 360 aaKnown RBP9.66□□□□□ -0.86
YKR040CYKR040C SER2P42941 309 aa9.66□□□□□ -0.86
YKR040CYKR040C YGL114WP53134 725 aa9.66□□□□□ -0.86
YKR040CYKR040C HSK3P69852 69 aa9.66□□□□□ -0.86
YKR040CYKR040C RPL21AQ02753 160 aaKnown RBP9.66□□□□□ -0.86
YKR040CYKR040C RGC1Q06108 1083 aaKnown RBP9.66□□□□□ -0.86
YKR040CYKR040C KEI1Q06346 221 aa9.66□□□□□ -0.86
YKR040CYKR040C ARR2Q06597 130 aa9.66□□□□□ -0.86
YKR040CYKR040C RPL21BQ12672 160 aaKnown RBP9.66□□□□□ -0.86
YKR040CYKR040C IFM1P25038 676 aa9.65□□□□□ -0.86
YKR040CYKR040C RPL5P26321 297 aaKnown RBP9.65□□□□□ -0.86
YKR040CYKR040C ACH1P32316 526 aa9.65□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms