RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YDR018CQ12185 396 aa1.97□□□□□ -2.09
SNU114YKL173W ERV2Q12284 196 aa1.97□□□□□ -2.09
SNU114YKL173W IZH4Q99393 312 aa1.97□□□□□ -2.09
SNU114YKL173W KRE5P22023 1365 aa1.97□□□□□ -2.09
SNU114YKL173W APC1P53886 1748 aa1.97□□□□□ -2.09
SNU114YKL173W TAO3P40468 2376 aa1.97□□□□□ -2.09
SNU114YKL173W PUT1P09368 476 aa1.97□□□□□ -2.09
SNU114YKL173W YCR025CP25352 136 aa1.97□□□□□ -2.09
SNU114YKL173W HOM6P31116 359 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W NTF2P33331 125 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W YKL075CP36083 450 aa1.97□□□□□ -2.09
SNU114YKL173W MRPL17P36528 281 aa1.97□□□□□ -2.09
SNU114YKL173W ECM13P38195 257 aa1.97□□□□□ -2.09
SNU114YKL173W YJR079WP47126 109 aa1.97□□□□□ -2.09
SNU114YKL173W TPS1Q00764 495 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W YOR289WQ12012 251 aaPredicted RBP1.97□□□□□ -2.09
SNU114YKL173W ATP16Q12165 160 aa1.97□□□□□ -2.09
SNU114YKL173W PCL9Q12477 304 aa1.97□□□□□ -2.09
SNU114YKL173W YLR361C-AQ3E795 98 aa1.97□□□□□ -2.09
SNU114YKL173W YPL229WQ99395 206 aa1.97□□□□□ -2.09
SNU114YKL173W Q0144Q9ZZW2 109 aa1.97□□□□□ -2.09
SNU114YKL173W YLR419WQ06698 1435 aaKnown RBP1.96□□□□□ -2.09
SNU114YKL173W HIS1P00498 297 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W CDC10P25342 322 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W QRI5P32344 111 aa1.96□□□□□ -2.1
SNU114YKL173W LHP1P33399 275 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W ECM8P38246 354 aa1.96□□□□□ -2.1
SNU114YKL173W TDA11P38854 504 aa1.96□□□□□ -2.1
SNU114YKL173W NVJ1P38881 321 aa1.96□□□□□ -2.1
SNU114YKL173W HPM1P40481 377 aa1.96□□□□□ -2.1
SNU114YKL173W PRM10P42946 383 aa1.96□□□□□ -2.1
SNU114YKL173W ATG18P43601 500 aa1.96□□□□□ -2.1
SNU114YKL173W YGL235WP53071 178 aa1.96□□□□□ -2.1
SNU114YKL173W PEX31P53203 462 aa1.96□□□□□ -2.1
SNU114YKL173W TRM44Q02648 567 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W YMD8Q03697 442 aa1.96□□□□□ -2.1
SNU114YKL173W PEX30Q06169 523 aa1.96□□□□□ -2.1
SNU114YKL173W YLR446WQ06204 433 aa1.96□□□□□ -2.1
SNU114YKL173W DTD1Q07648 150 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W RRP42Q12277 265 aaPredicted RBP1.96□□□□□ -2.1
SNU114YKL173W UTP23Q12339 254 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W RDI1Q12434 202 aa1.96□□□□□ -2.1
SNU114YKL173W EFG1Q3E705 233 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W YCL001W-BQ96VH2 84 aa1.96□□□□□ -2.1
SNU114YKL173W SRB8P25648 1427 aa1.96□□□□□ -2.1
SNU114YKL173W YOR304C-AO14468 76 aa1.96□□□□□ -2.1
SNU114YKL173W IFM1P25038 676 aa1.96□□□□□ -2.1
SNU114YKL173W CDC50P25656 391 aa1.96□□□□□ -2.1
SNU114YKL173W IDH1P28834 360 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SNU114YKL173W UGX2P32772 223 aa1.96□□□□□ -2.1
SNU114YKL173W RAD5P32849 1169 aaPredicted RBP1.96□□□□□ -2.1
SNU114YKL173W TVP38P36164 337 aa1.96□□□□□ -2.1
SNU114YKL173W YIL029CP40538 142 aa1.96□□□□□ -2.1
SNU114YKL173W YNL320WP42840 284 aa1.96□□□□□ -2.1
SNU114YKL173W YGR201CP42936 225 aa1.96□□□□□ -2.1
SNU114YKL173W AIM23P47015 356 aa1.96□□□□□ -2.1
SNU114YKL173W PGU1P47180 361 aa1.96□□□□□ -2.1
SNU114YKL173W MIC26P50087 233 aa1.96□□□□□ -2.1
SNU114YKL173W VEL1P53058 206 aa1.96□□□□□ -2.1
SNU114YKL173W COS6P53344 381 aa1.96□□□□□ -2.1
SNU114YKL173W NRK1P53915 240 aa1.96□□□□□ -2.1
SNU114YKL173W SFH1Q06168 426 aa1.96□□□□□ -2.1
SNU114YKL173W YPR127WQ06494 345 aa1.96□□□□□ -2.1
SNU114YKL173W PLB3Q08108 686 aa1.96□□□□□ -2.1
SNU114YKL173W SME1Q12330 94 aaPredicted RBP1.96□□□□□ -2.1
SNU114YKL173W BBP1Q12365 385 aa1.96□□□□□ -2.1
SNU114YKL173W PET54P10834 293 aa1.96□□□□□ -2.1
SNU114YKL173W MSI1P13712 422 aa1.96□□□□□ -2.1
SNU114YKL173W GCY1P14065 312 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SNU114YKL173W ATG15P25641 520 aa1.96□□□□□ -2.1
SNU114YKL173W CAM1P29547 415 aaKnown RBP1.96□□□□□ -2.1
SNU114YKL173W SHG1P38337 142 aa1.96□□□□□ -2.1
SNU114YKL173W SEO1P39709 593 aa1.96□□□□□ -2.1
SNU114YKL173W YJL213WP40896 331 aa1.96□□□□□ -2.1
SNU114YKL173W IRC18P47056 224 aa1.96□□□□□ -2.1
SNU114YKL173W CSN9Q03981 162 aa1.96□□□□□ -2.1
SNU114YKL173W DCN1Q12395 269 aa1.96□□□□□ -2.1
SNU114YKL173W EAF3Q12432 401 aa1.96□□□□□ -2.1
SNU114YKL173W ILV1P00927 576 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W RPL4AP10664 362 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W MGT1P26188 188 aa1.95□□□□□ -2.1
SNU114YKL173W YCR087C-AP37263 153 aa1.95□□□□□ -2.1
SNU114YKL173W MBA1P38300 278 aa1.95□□□□□ -2.1
SNU114YKL173W YER186CP40101 306 aa1.95□□□□□ -2.1
SNU114YKL173W OST3P48439 350 aa1.95□□□□□ -2.1
SNU114YKL173W RPL4BP49626 362 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W SBH2P52871 88 aa1.95□□□□□ -2.1
SNU114YKL173W YNL095CP53932 642 aa1.95□□□□□ -2.1
SNU114YKL173W PLP1Q04004 230 aa1.95□□□□□ -2.1
SNU114YKL173W PER33Q12144 273 aa1.95□□□□□ -2.1
SNU114YKL173W FYV7Q12247 151 aa1.95□□□□□ -2.1
SNU114YKL173W YPR117WQ06116 2489 aa1.95□□□□□ -2.1
SNU114YKL173W SPT3P06844 337 aa1.95□□□□□ -2.1
SNU114YKL173W CBP6P07253 162 aaPredicted RBP1.95□□□□□ -2.1
SNU114YKL173W MET2P08465 486 aa1.95□□□□□ -2.1
SNU114YKL173W HSP30P25619 332 aa1.95□□□□□ -2.1
SNU114YKL173W BUD23P25627 275 aaPredicted RBP1.95□□□□□ -2.1
SNU114YKL173W ARO7P32178 256 aa1.95□□□□□ -2.1
SNU114YKL173W COX15P40086 486 aa1.95□□□□□ -2.1
SNU114YKL173W PAC10P48363 199 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms