RNA–Protein interactions for RNA: YJR136C

TTI2, Transcript of Subunit of the ASTRA complex, involved in chromatin remodeling, yeastyeast

Gene TTI2, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TTI2YJR136C GDH2P33327 1092 aaKnown RBP3.27□□□□□ -1.89
TTI2YJR136C YBR096WP38256 230 aa3.27□□□□□ -1.89
TTI2YJR136C MIC12P38341 106 aa3.27□□□□□ -1.89
TTI2YJR136C YMR144WP40214 342 aaKnown RBP3.27□□□□□ -1.89
TTI2YJR136C YFR045WP43617 309 aa3.27□□□□□ -1.89
TTI2YJR136C MCM22P47167 239 aa3.27□□□□□ -1.89
TTI2YJR136C NIF3P53081 288 aa3.27□□□□□ -1.89
TTI2YJR136C SNZ2P53824 298 aa3.27□□□□□ -1.89
TTI2YJR136C YPR063CQ12160 140 aa3.27□□□□□ -1.89
TTI2YJR136C PRR2Q12310 699 aa3.27□□□□□ -1.89
TTI2YJR136C YBL008W-AQ3E821 79 aa3.27□□□□□ -1.89
TTI2YJR136C TOP2P06786 1428 aaKnown RBP3.27□□□□□ -1.89
TTI2YJR136C ARO1P08566 1588 aaKnown RBP3.26□□□□□ -1.89
TTI2YJR136C JIP3O13555 125 aa3.26□□□□□ -1.89
TTI2YJR136C SPT3P06844 337 aa3.26□□□□□ -1.89
TTI2YJR136C BCY1P07278 416 aaKnown RBP3.26□□□□□ -1.89
TTI2YJR136C COS2P0CX12 379 aa3.26□□□□□ -1.89
TTI2YJR136C COS3P0CX13 379 aa3.26□□□□□ -1.89
TTI2YJR136C EHD3P28817 500 aa3.26□□□□□ -1.89
TTI2YJR136C SFC1P33303 322 aa3.26□□□□□ -1.89
TTI2YJR136C RIB1P38066 345 aa3.26□□□□□ -1.89
TTI2YJR136C COS4P43542 379 aa3.26□□□□□ -1.89
TTI2YJR136C CTF19Q02732 369 aa3.26□□□□□ -1.89
TTI2YJR136C YML108WQ03759 105 aa3.26□□□□□ -1.89
TTI2YJR136C SEI1Q06058 285 aa3.26□□□□□ -1.89
TTI2YJR136C SLD7Q08457 257 aa3.26□□□□□ -1.89
TTI2YJR136C YLR126CQ12288 251 aa3.26□□□□□ -1.89
TTI2YJR136C PST1Q12355 444 aa3.26□□□□□ -1.89
TTI2YJR136C GIS3Q12418 502 aa3.26□□□□□ -1.89
TTI2YJR136C ARG80P07249 177 aa3.25□□□□□ -1.89
TTI2YJR136C ZWF1P11412 505 aaKnown RBP3.25□□□□□ -1.89
TTI2YJR136C CDC10P25342 322 aaKnown RBP3.25□□□□□ -1.89
TTI2YJR136C PRP18P33411 251 aaPredicted RBP3.25□□□□□ -1.89
TTI2YJR136C ECO1P43605 281 aa3.25□□□□□ -1.89
TTI2YJR136C CPR7P47103 393 aa3.25□□□□□ -1.89
TTI2YJR136C ILM1P47155 203 aa3.25□□□□□ -1.89
TTI2YJR136C YPL039WQ03080 316 aa3.25□□□□□ -1.89
TTI2YJR136C MRPS17Q03246 237 aaPredicted RBP3.25□□□□□ -1.89
TTI2YJR136C CDC123Q05791 360 aa3.25□□□□□ -1.89
TTI2YJR136C SSQ1Q05931 657 aaPredicted RBP3.25□□□□□ -1.89
TTI2YJR136C ULS1Q08562 1619 aa3.25□□□□□ -1.89
TTI2YJR136C CDC36P06100 191 aaPredicted RBP3.24□□□□□ -1.89
TTI2YJR136C CDC33P07260 213 aaKnown RBP3.24□□□□□ -1.89
TTI2YJR136C YBL081WP38180 368 aaKnown RBP3.24□□□□□ -1.89
TTI2YJR136C ERG28P40030 148 aa3.24□□□□□ -1.89
TTI2YJR136C RFC4P40339 323 aaKnown RBP3.24□□□□□ -1.89
TTI2YJR136C YJL028WP47062 111 aa3.24□□□□□ -1.89
TTI2YJR136C ALG9P53868 555 aaKnown RBP3.24□□□□□ -1.89
TTI2YJR136C GIM3P53900 129 aa3.24□□□□□ -1.89
TTI2YJR136C FYV6P53913 173 aa3.24□□□□□ -1.89
TTI2YJR136C HEM25Q07534 307 aa3.24□□□□□ -1.89
TTI2YJR136C YOR186WQ08560 144 aa3.24□□□□□ -1.89
TTI2YJR136C DCN1Q12395 269 aa3.24□□□□□ -1.89
TTI2YJR136C SAC3P46674 1301 aa3.23□□□□□ -1.89
TTI2YJR136C RNP1P32385 249 aa3.23□□□□□ -1.89
TTI2YJR136C TKL2P33315 681 aa3.23□□□□□ -1.89
TTI2YJR136C SLX1P38324 304 aa3.23□□□□□ -1.89
TTI2YJR136C URA8P38627 578 aaPredicted RBP3.23□□□□□ -1.89
TTI2YJR136C RTC3P38804 111 aaPredicted RBP3.23□□□□□ -1.89
TTI2YJR136C YER189WP40104 122 aa3.23□□□□□ -1.89
TTI2YJR136C YIL059CP40520 121 aa3.23□□□□□ -1.89
TTI2YJR136C OST3P48439 350 aa3.23□□□□□ -1.89
TTI2YJR136C RAD17P48581 401 aa3.23□□□□□ -1.89
TTI2YJR136C IES4Q08561 116 aa3.23□□□□□ -1.89
TTI2YJR136C GET4Q12125 312 aa3.23□□□□□ -1.89
TTI2YJR136C YKL183C-AQ3E765 70 aa3.23□□□□□ -1.89
TTI2YJR136C RPL28P02406 149 aaKnown RBP3.22□□□□□ -1.89
TTI2YJR136C SNA3P14359 133 aa3.22□□□□□ -1.89
TTI2YJR136C NTF2P33331 125 aaKnown RBP3.22□□□□□ -1.89
TTI2YJR136C CBT1P36038 271 aaPredicted RBP3.22□□□□□ -1.89
TTI2YJR136C ECM13P38195 257 aa3.22□□□□□ -1.89
TTI2YJR136C ECM14P38836 430 aa3.22□□□□□ -1.89
TTI2YJR136C HAM1P47119 197 aaKnown RBP3.22□□□□□ -1.89
TTI2YJR136C MIG2P53035 382 aa3.22□□□□□ -1.89
TTI2YJR136C YMR114CQ04471 368 aaKnown RBP3.22□□□□□ -1.89
TTI2YJR136C YDR114CQ04597 100 aa3.22□□□□□ -1.89
TTI2YJR136C YDR222WQ04925 415 aa3.22□□□□□ -1.89
TTI2YJR136C JLP1Q12358 412 aa3.22□□□□□ -1.89
TTI2YJR136C MRX4Q12467 430 aa3.22□□□□□ -1.89
TTI2YJR136C CHC1P22137 1653 aaKnown RBP3.22□□□□□ -1.89
TTI2YJR136C VTH1P40438 1549 aa3.22□□□□□ -1.89
TTI2YJR136C VTH2P40890 1549 aa3.22□□□□□ -1.89
TTI2YJR136C SPP41P38904 1435 aa3.21□□□□□ -1.9
TTI2YJR136C SNT2P53127 1403 aa3.21□□□□□ -1.9
TTI2YJR136C GDB1Q06625 1536 aa3.21□□□□□ -1.9
TTI2YJR136C IDH1P28834 360 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
TTI2YJR136C CAB3P36076 571 aa3.21□□□□□ -1.9
TTI2YJR136C TRM9P49957 279 aa3.21□□□□□ -1.9
TTI2YJR136C RMR1P53060 241 aa3.21□□□□□ -1.9
TTI2YJR136C CUS2P53830 285 aaPredicted RBP3.21□□□□□ -1.9
TTI2YJR136C YNL046WP53956 172 aa3.21□□□□□ -1.9
TTI2YJR136C ATG38Q05789 226 aaKnown RBP3.21□□□□□ -1.9
TTI2YJR136C YOL019WQ08157 551 aa3.21□□□□□ -1.9
TTI2YJR136C TIM22Q12328 207 aa3.21□□□□□ -1.9
TTI2YJR136C EMP46Q12396 444 aa3.21□□□□□ -1.9
TTI2YJR136C YBL112CQ3E7Y4 105 aa3.21□□□□□ -1.9
TTI2YJR136C PDR10P51533 1564 aa3.21□□□□□ -1.9
TTI2YJR136C ERD2P18414 219 aa3.2□□□□□ -1.9
TTI2YJR136C PPH21P23594 369 aa3.2□□□□□ -1.9
TTI2YJR136C YNL194CP40169 301 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 146.8 ms