RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W BSP1Q06604 576 aa7.26□□□□□ -1.25
UFD1YGR048W SOD2P00447 233 aa7.25□□□□□ -1.25
UFD1YGR048W YFL068WP0CX99 160 aa7.25□□□□□ -1.25
UFD1YGR048W YLL066W-AP0CY00 160 aa7.25□□□□□ -1.25
UFD1YGR048W YLL067W-AP0CY01 160 aa7.25□□□□□ -1.25
UFD1YGR048W BGL2P15703 313 aaKnown RBP7.25□□□□□ -1.25
UFD1YGR048W CNE1P27825 502 aa7.25□□□□□ -1.25
UFD1YGR048W AFG1P32317 509 aa7.25□□□□□ -1.25
UFD1YGR048W GLC7P32598 312 aaKnown RBP7.25□□□□□ -1.25
UFD1YGR048W ALK2P32789 676 aaPredicted RBP7.25□□□□□ -1.25
UFD1YGR048W QDR3P38227 689 aa7.25□□□□□ -1.25
UFD1YGR048W URA8P38627 578 aaPredicted RBP7.25□□□□□ -1.25
UFD1YGR048W WSS1P38838 269 aa7.25□□□□□ -1.25
UFD1YGR048W EAF5P39995 279 aa7.25□□□□□ -1.25
UFD1YGR048W NPY1P53164 384 aa7.25□□□□□ -1.25
UFD1YGR048W SMX3P54999 86 aaPredicted RBP7.25□□□□□ -1.25
UFD1YGR048W ADD37Q03233 198 aa7.25□□□□□ -1.25
UFD1YGR048W YDR132CQ03900 495 aa7.25□□□□□ -1.25
UFD1YGR048W TMN2Q04562 672 aa7.25□□□□□ -1.25
UFD1YGR048W CNL1Q06333 122 aa7.25□□□□□ -1.25
UFD1YGR048W RRT7Q07829 113 aa7.25□□□□□ -1.25
UFD1YGR048W YLR030WQ07967 263 aa7.25□□□□□ -1.25
UFD1YGR048W GAS5Q08193 484 aa7.25□□□□□ -1.25
UFD1YGR048W CRT10Q08226 957 aa7.25□□□□□ -1.25
UFD1YGR048W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
UFD1YGR048W YCL012CQ8J0M4 134 aa7.25□□□□□ -1.25
UFD1YGR048W YPR096CO13587 100 aa7.24□□□□□ -1.25
UFD1YGR048W YOR304C-AO14468 76 aa7.24□□□□□ -1.25
UFD1YGR048W CYC7P00045 113 aa7.24□□□□□ -1.25
UFD1YGR048W INH1P01097 85 aa7.24□□□□□ -1.25
UFD1YGR048W COX9P07255 59 aa7.24□□□□□ -1.25
UFD1YGR048W LRE1P25579 583 aaKnown RBP7.24□□□□□ -1.25
UFD1YGR048W YMC1P32331 307 aa7.24□□□□□ -1.25
UFD1YGR048W HMX1P32339 317 aa7.24□□□□□ -1.25
UFD1YGR048W YKU70P32807 602 aa7.24□□□□□ -1.25
UFD1YGR048W SMB1P40018 196 aaKnown RBP7.24□□□□□ -1.25
UFD1YGR048W DLS1P40366 167 aa7.24□□□□□ -1.25
UFD1YGR048W MET28P40573 187 aa7.24□□□□□ -1.25
UFD1YGR048W MIC26P50087 233 aa7.24□□□□□ -1.25
UFD1YGR048W NIF3P53081 288 aa7.24□□□□□ -1.25
UFD1YGR048W YNL034WP53963 612 aa7.24□□□□□ -1.25
UFD1YGR048W DIA1P54005 336 aa7.24□□□□□ -1.25
UFD1YGR048W RCE1Q03530 315 aa7.24□□□□□ -1.25
UFD1YGR048W ARA2Q04212 335 aa7.24□□□□□ -1.25
UFD1YGR048W ADH6Q04894 360 aaKnown RBP7.24□□□□□ -1.25
UFD1YGR048W ECM22Q05958 814 aaPredicted RBP7.24□□□□□ -1.25
UFD1YGR048W SWM1Q12379 170 aa7.24□□□□□ -1.25
UFD1YGR048W PAR32Q12515 295 aaKnown RBP7.24□□□□□ -1.25
UFD1YGR048W HUT1Q12520 339 aa7.24□□□□□ -1.25
UFD1YGR048W TPI1P00942 248 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W MES1P00958 751 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W HVG1P0CE11 249 aa7.23□□□□□ -1.25
UFD1YGR048W ERS1P17261 260 aa7.23□□□□□ -1.25
UFD1YGR048W NUP1P20676 1076 aa7.23□□□□□ -1.25
UFD1YGR048W MIG1P27705 504 aa7.23□□□□□ -1.25
UFD1YGR048W ERG24P32462 438 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W ICS2P38284 255 aa7.23□□□□□ -1.25
UFD1YGR048W FMO1P38866 432 aa7.23□□□□□ -1.25
UFD1YGR048W PAC2P39937 518 aa7.23□□□□□ -1.25
UFD1YGR048W HEM14P40012 539 aa7.23□□□□□ -1.25
UFD1YGR048W RMD9P53140 646 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W YGR079WP53249 370 aa7.23□□□□□ -1.25
UFD1YGR048W YDR391CQ04170 232 aa7.23□□□□□ -1.25
UFD1YGR048W HNT1Q04344 158 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W ROY1Q04847 553 aa7.23□□□□□ -1.25
UFD1YGR048W IZH2Q12442 317 aa7.23□□□□□ -1.25
UFD1YGR048W GLT1Q12680 2145 aaKnown RBP7.23□□□□□ -1.25
UFD1YGR048W RPL13AQ12690 199 aaPredicted RBP7.23□□□□□ -1.25
UFD1YGR048W YLR146W-AQ2V2P1 62 aa7.23□□□□□ -1.25
UFD1YGR048W YOR338WQ99326 363 aa7.23□□□□□ -1.25
UFD1YGR048W THI80P35202 319 aa7.22□□□□□ -1.25
UFD1YGR048W PAN3P36102 679 aaPredicted RBP7.22□□□□□ -1.25
UFD1YGR048W AGP2P38090 596 aa7.22□□□□□ -1.25
UFD1YGR048W RPS20P38701 121 aaKnown RBP7.22□□□□□ -1.25
UFD1YGR048W FAA3P39002 694 aa7.22□□□□□ -1.25
UFD1YGR048W GIP2P40036 548 aa7.22□□□□□ -1.25
UFD1YGR048W HMF1P40037 129 aaKnown RBP7.22□□□□□ -1.25
UFD1YGR048W RIB4P50861 169 aaPredicted RBP7.22□□□□□ -1.25
UFD1YGR048W ASM4Q05166 528 aa7.22□□□□□ -1.25
UFD1YGR048W FSF1Q12029 327 aaKnown RBP7.22□□□□□ -1.25
UFD1YGR048W YCT1Q12235 531 aa7.22□□□□□ -1.25
UFD1YGR048W PRR2Q12310 699 aa7.22□□□□□ -1.25
UFD1YGR048W RAX2Q12465 1220 aa7.22□□□□□ -1.25
UFD1YGR048W ADK1P07170 222 aaKnown RBP7.21□□□□□ -1.26
UFD1YGR048W ANB1P19211 157 aa7.21□□□□□ -1.26
UFD1YGR048W RPB5P20434 215 aa7.21□□□□□ -1.26
UFD1YGR048W ERG3P32353 365 aa7.21□□□□□ -1.26
UFD1YGR048W PPZ2P33329 710 aa7.21□□□□□ -1.26
UFD1YGR048W YKL187CP34231 750 aa7.21□□□□□ -1.26
UFD1YGR048W YKL102CP34249 101 aa7.21□□□□□ -1.26
UFD1YGR048W MRPL27P36526 146 aaPredicted RBP7.21□□□□□ -1.26
UFD1YGR048W ZTA1P38230 334 aaKnown RBP7.21□□□□□ -1.26
UFD1YGR048W CDC40P40968 455 aaPredicted RBP7.21□□□□□ -1.26
UFD1YGR048W ATG27P46989 271 aa7.21□□□□□ -1.26
UFD1YGR048W MUP1P50276 574 aa7.21□□□□□ -1.26
UFD1YGR048W YGR250CP53316 781 aaKnown RBP7.21□□□□□ -1.26
UFD1YGR048W PGA1P53896 198 aa7.21□□□□□ -1.26
UFD1YGR048W FRE7Q12333 620 aa7.21□□□□□ -1.26
UFD1YGR048W LAS17Q12446 633 aa7.21□□□□□ -1.26
UFD1YGR048W MBF1O14467 151 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms