RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YPR098CQ06089 161 aa0.57□□□□□ -2.32
CUL3YGR003W OAC1P32332 324 aa0.56□□□□□ -2.32
CUL3YGR003W RIB7P33312 244 aa0.56□□□□□ -2.32
CUL3YGR003W YBR219CP38317 127 aa0.56□□□□□ -2.32
CUL3YGR003W RTT105P40063 208 aa0.56□□□□□ -2.32
CUL3YGR003W EMC2P47133 292 aaKnown RBP0.56□□□□□ -2.32
CUL3YGR003W NUP49Q02199 472 aa0.56□□□□□ -2.32
CUL3YGR003W SPG3Q04398 127 aaPredicted RBP0.56□□□□□ -2.32
CUL3YGR003W ADH6Q04894 360 aaKnown RBP0.56□□□□□ -2.32
CUL3YGR003W ATG17Q06410 417 aa0.56□□□□□ -2.32
CUL3YGR003W CSI2Q08054 341 aa0.56□□□□□ -2.32
CUL3YGR003W NIP7Q08962 181 aaKnown RBP0.56□□□□□ -2.32
CUL3YGR003W ERD2P18414 219 aa0.56□□□□□ -2.32
CUL3YGR003W DAL82P21705 255 aa0.56□□□□□ -2.32
CUL3YGR003W MDH3P32419 343 aaKnown RBP RIP-Chip data0.56□□□□□ -2.32not detected
CUL3YGR003W YPT52P36018 234 aaKnown RBP0.56□□□□□ -2.32
CUL3YGR003W PRM10P42946 383 aa0.56□□□□□ -2.32
CUL3YGR003W INM2Q05533 292 aa0.56□□□□□ -2.32
CUL3YGR003W KAP95Q06142 861 aaKnown RBP0.56□□□□□ -2.32
CUL3YGR003W MSH5Q12175 901 aa0.56□□□□□ -2.32
CUL3YGR003W YOL107WQ12239 342 aa0.56□□□□□ -2.32
CUL3YGR003W RPL24AP04449 155 aaKnown RBP0.55□□□□□ -2.32
CUL3YGR003W SNA3P14359 133 aa0.55□□□□□ -2.32
CUL3YGR003W SGE1P33335 543 aa0.55□□□□□ -2.32
CUL3YGR003W YKL075CP36083 450 aa0.55□□□□□ -2.32
CUL3YGR003W YKR045CP36138 183 aa0.55□□□□□ -2.32
CUL3YGR003W YJR079WP47126 109 aa0.55□□□□□ -2.32
CUL3YGR003W USE1P53146 245 aa0.55□□□□□ -2.32
CUL3YGR003W SEI1Q06058 285 aa0.55□□□□□ -2.32
CUL3YGR003W ATG39Q06159 398 aa0.55□□□□□ -2.32
CUL3YGR003W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.55□□□□□ -2.32not detected
CUL3YGR003W RRT8Q08219 342 aa0.55□□□□□ -2.32
CUL3YGR003W DCN1Q12395 269 aa0.55□□□□□ -2.32
CUL3YGR003W MRP1P10662 321 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W VMA11P32842 164 aa0.54□□□□□ -2.32
CUL3YGR003W VPS21P36017 210 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W ECM33P38248 429 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W ERV15P38312 142 aa0.54□□□□□ -2.32
CUL3YGR003W GPI8P49018 411 aa0.54□□□□□ -2.32
CUL3YGR003W TOS8P53147 276 aa0.54□□□□□ -2.32
CUL3YGR003W YGR026WP53217 278 aa0.54□□□□□ -2.32
CUL3YGR003W MPP6P53725 186 aaPredicted RBP0.54□□□□□ -2.32
CUL3YGR003W YNR062CP53748 327 aa0.54□□□□□ -2.32
CUL3YGR003W PRM15Q03262 622 aa0.54□□□□□ -2.32
CUL3YGR003W YDR209CQ03480 137 aa0.54□□□□□ -2.32
CUL3YGR003W TRM12Q04235 462 aa0.54□□□□□ -2.32
CUL3YGR003W NEJ1Q06148 342 aa0.54□□□□□ -2.32
CUL3YGR003W YLR162WQ06235 118 aa0.54□□□□□ -2.32
CUL3YGR003W HEM25Q07534 307 aa0.54□□□□□ -2.32
CUL3YGR003W YCT1Q12235 531 aa0.54□□□□□ -2.32
CUL3YGR003W INO80P53115 1489 aa0.54□□□□□ -2.32
CUL3YGR003W RPL2AP0CX45 254 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W RPL2BP0CX46 254 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W RPF1P38805 295 aaKnown RBP0.54□□□□□ -2.32
CUL3YGR003W BFR1P38934 470 aaKnown RBP RIP-Chip data0.54□□□□□ -2.32not detected
CUL3YGR003W CAT5P41735 233 aa0.54□□□□□ -2.32
CUL3YGR003W HOC1P47124 396 aa0.54□□□□□ -2.32
CUL3YGR003W YGR219WP53307 113 aa0.54□□□□□ -2.32
CUL3YGR003W YMR279CQ03263 540 aa0.54□□□□□ -2.32
CUL3YGR003W ATG31Q12421 196 aa0.54□□□□□ -2.32
CUL3YGR003W IPP1P00817 287 aaKnown RBP0.53□□□□□ -2.32
CUL3YGR003W MSW1P04803 379 aa0.53□□□□□ -2.32
CUL3YGR003W YOL162WP0CF19 215 aa0.53□□□□□ -2.32
CUL3YGR003W MRPL39P36533 70 aa0.53□□□□□ -2.32
CUL3YGR003W DSE2P38844 325 aa0.53□□□□□ -2.32
CUL3YGR003W PET100P38958 111 aa0.53□□□□□ -2.32
CUL3YGR003W FIS1P40515 155 aa0.53□□□□□ -2.32
CUL3YGR003W AGE2P40529 298 aa0.53□□□□□ -2.32
CUL3YGR003W YKE4P40544 346 aa0.53□□□□□ -2.32
CUL3YGR003W YJR149WP47177 404 aa0.53□□□□□ -2.32
CUL3YGR003W RHO3Q00245 231 aaKnown RBP0.53□□□□□ -2.32
CUL3YGR003W RRS1Q08746 203 aaKnown RBP0.53□□□□□ -2.32
CUL3YGR003W PET9P18239 318 aaKnown RBP0.53□□□□□ -2.33
CUL3YGR003W RNA15P25299 296 aaPredicted RBP0.53□□□□□ -2.33
CUL3YGR003W FZO1P38297 855 aa0.53□□□□□ -2.33
CUL3YGR003W YBR220CP38318 560 aa0.53□□□□□ -2.33
CUL3YGR003W YHR127WP38833 243 aaKnown RBP0.53□□□□□ -2.33
CUL3YGR003W AVT2P39981 480 aa0.53□□□□□ -2.33
CUL3YGR003W YNL134CP53912 376 aaKnown RBP0.53□□□□□ -2.33
CUL3YGR003W CSM4Q08955 156 aa0.53□□□□□ -2.33
CUL3YGR003W BTS1Q12051 335 aa0.53□□□□□ -2.33
CUL3YGR003W YLR126CQ12288 251 aa0.53□□□□□ -2.33
CUL3YGR003W FLO9P39712 1322 aa0.52□□□□□ -2.33
CUL3YGR003W RPL9AP05738 191 aaKnown RBP0.52□□□□□ -2.33
CUL3YGR003W RSR1P13856 272 aa0.52□□□□□ -2.33
CUL3YGR003W FCY2P17064 533 aa0.52□□□□□ -2.33
CUL3YGR003W MDH2P22133 377 aa0.52□□□□□ -2.33
CUL3YGR003W YGL010WP25338 174 aa0.52□□□□□ -2.33
CUL3YGR003W RPL9BP51401 191 aaKnown RBP0.52□□□□□ -2.33
CUL3YGR003W SML1Q04964 104 aa0.52□□□□□ -2.33
CUL3YGR003W YPL257WQ08974 193 aa0.52□□□□□ -2.33
CUL3YGR003W HTL1Q9URQ5 78 aa0.52□□□□□ -2.33
CUL3YGR003W PEX17P40155 199 aa0.52□□□□□ -2.33
CUL3YGR003W YIL001WP40560 513 aa0.52□□□□□ -2.33
CUL3YGR003W YJR056CP47115 236 aa0.52□□□□□ -2.33
CUL3YGR003W BOL2P53082 120 aa0.52□□□□□ -2.33
CUL3YGR003W USB1Q12208 290 aaKnown RBP0.52□□□□□ -2.33
CUL3YGR003W RPO26P20435 155 aa0.51□□□□□ -2.33
CUL3YGR003W YRB2P40517 327 aa0.51□□□□□ -2.33
CUL3YGR003W BNA6P43619 295 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms