RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YHR032W-AP0C5N6 59 aa2.78□□□□□ -1.96
SCL1YGL011C ERD2P18414 219 aa2.78□□□□□ -1.96
SCL1YGL011C SCO1P23833 295 aa2.78□□□□□ -1.96
SCL1YGL011C YMR144WP40214 342 aaKnown RBP2.78□□□□□ -1.96
SCL1YGL011C FAR8Q05040 523 aa2.78□□□□□ -1.96
SCL1YGL011C RHO1P06780 209 aaKnown RBP2.77□□□□□ -1.97
SCL1YGL011C YHR125WP38831 101 aa2.77□□□□□ -1.97
SCL1YGL011C ARC15P40518 154 aaRIP-Chip data2.77□□□□□ -1.97not detected
SCL1YGL011C INM2Q05533 292 aa2.77□□□□□ -1.97
SCL1YGL011C COX5AP00424 153 aa2.76□□□□□ -1.97
SCL1YGL011C IPP1P00817 287 aaKnown RBP2.76□□□□□ -1.97
SCL1YGL011C Q0255P03881 472 aa2.76□□□□□ -1.97
SCL1YGL011C DSF1P0CX08 502 aa2.76□□□□□ -1.97
SCL1YGL011C YNR073CP0CX09 502 aa2.76□□□□□ -1.97
SCL1YGL011C CUE1P38428 203 aa2.76□□□□□ -1.97
SCL1YGL011C MNN5P46982 586 aa2.76□□□□□ -1.97
SCL1YGL011C SNX4P47057 423 aa2.76□□□□□ -1.97
SCL1YGL011C TRM9P49957 279 aa2.76□□□□□ -1.97
SCL1YGL011C GTR2P53290 341 aa2.76□□□□□ -1.97
SCL1YGL011C CGI121Q03705 181 aaKnown RBP2.76□□□□□ -1.97
SCL1YGL011C SNA3P14359 133 aa2.75□□□□□ -1.97
SCL1YGL011C CCA1P21269 546 aa2.75□□□□□ -1.97
SCL1YGL011C SCM4P32564 187 aa2.75□□□□□ -1.97
SCL1YGL011C NTF2P33331 125 aaKnown RBP2.75□□□□□ -1.97
SCL1YGL011C VPS21P36017 210 aaKnown RBP2.75□□□□□ -1.97
SCL1YGL011C RTR1P40084 226 aaPredicted RBP2.75□□□□□ -1.97
SCL1YGL011C RPC17P47076 161 aa2.75□□□□□ -1.97
SCL1YGL011C YHR139C-AO13536 103 aa2.74□□□□□ -1.97
SCL1YGL011C CDC10P25342 322 aaKnown RBP2.74□□□□□ -1.97
SCL1YGL011C YPT52P36018 234 aaKnown RBP2.74□□□□□ -1.97
SCL1YGL011C CTR2P38865 189 aa2.74□□□□□ -1.97
SCL1YGL011C CAT5P41735 233 aa2.74□□□□□ -1.97
SCL1YGL011C YJR149WP47177 404 aa2.74□□□□□ -1.97
SCL1YGL011C DAN1P47178 298 aa2.74□□□□□ -1.97
SCL1YGL011C YPL257WQ08974 193 aa2.74□□□□□ -1.97
SCL1YGL011C BMH2P34730 273 aaKnown RBP2.73□□□□□ -1.97
SCL1YGL011C YOR062CP36025 268 aa2.73□□□□□ -1.97
SCL1YGL011C RMR1P53060 241 aa2.73□□□□□ -1.97
SCL1YGL011C TOS8P53147 276 aa2.73□□□□□ -1.97
SCL1YGL011C EMC6Q12431 108 aa2.73□□□□□ -1.97
SCL1YGL011C HTL1Q9URQ5 78 aa2.73□□□□□ -1.97
SCL1YGL011C SIR4P11978 1358 aa2.73□□□□□ -1.97
SCL1YGL011C MIC12P38341 106 aa2.72□□□□□ -1.97
SCL1YGL011C RPA43P46669 326 aa2.72□□□□□ -1.97
SCL1YGL011C MCM22P47167 239 aa2.72□□□□□ -1.97
SCL1YGL011C YMR279CQ03263 540 aa2.72□□□□□ -1.97
SCL1YGL011C DCR2Q05924 578 aa2.72□□□□□ -1.97
SCL1YGL011C NIP7Q08962 181 aaKnown RBP2.72□□□□□ -1.97
SCL1YGL011C AKR2Q12013 749 aa2.72□□□□□ -1.97
SCL1YGL011C BCY1P07278 416 aaKnown RBP2.71□□□□□ -1.98
SCL1YGL011C GRE3P38715 327 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SCL1YGL011C PEX17P40155 199 aa2.71□□□□□ -1.98
SCL1YGL011C FIS1P40515 155 aa2.71□□□□□ -1.98
SCL1YGL011C NSA1P53136 463 aaPredicted RBP2.71□□□□□ -1.98
SCL1YGL011C RNH1Q04740 348 aa2.71□□□□□ -1.98
SCL1YGL011C MHT1Q12525 324 aa2.71□□□□□ -1.98
SCL1YGL011C VMA6P32366 345 aaKnown RBP2.7□□□□□ -1.98
SCL1YGL011C RIB1P38066 345 aa2.7□□□□□ -1.98
SCL1YGL011C COX15P40086 486 aa2.7□□□□□ -1.98
SCL1YGL011C OTU1P43558 301 aa2.7□□□□□ -1.98
SCL1YGL011C YJL027CP47063 138 aaPredicted RBP2.7□□□□□ -1.98
SCL1YGL011C HAM1P47119 197 aaKnown RBP2.7□□□□□ -1.98
SCL1YGL011C TIM11P81449 96 aaPredicted RBP2.7□□□□□ -1.98
SCL1YGL011C YOR283WQ12040 230 aaKnown RBP2.7□□□□□ -1.98
SCL1YGL011C THP2O13539 261 aaKnown RBP2.69□□□□□ -1.98
SCL1YGL011C RPL24BP24000 155 aaKnown RBP2.69□□□□□ -1.98
SCL1YGL011C RTC3P38804 111 aaPredicted RBP2.69□□□□□ -1.98
SCL1YGL011C RPF1P38805 295 aaKnown RBP2.69□□□□□ -1.98
SCL1YGL011C ILM1P47155 203 aa2.69□□□□□ -1.98
SCL1YGL011C YGR026WP53217 278 aa2.69□□□□□ -1.98
SCL1YGL011C ERV29P53337 310 aa2.69□□□□□ -1.98
SCL1YGL011C ATG39Q06159 398 aa2.69□□□□□ -1.98
SCL1YGL011C ADH3P07246 375 aaKnown RBP2.68□□□□□ -1.98
SCL1YGL011C PUT1P09368 476 aa2.68□□□□□ -1.98
SCL1YGL011C YMR31P19955 123 aa2.68□□□□□ -1.98
SCL1YGL011C PPA2P28239 310 aa2.68□□□□□ -1.98
SCL1YGL011C DOA4P32571 926 aa2.68□□□□□ -1.98
SCL1YGL011C URA8P38627 578 aaPredicted RBP2.68□□□□□ -1.98
SCL1YGL011C YAR068WP39564 161 aa2.68□□□□□ -1.98
SCL1YGL011C YJR056CP47115 236 aa2.68□□□□□ -1.98
SCL1YGL011C CDC123Q05791 360 aa2.68□□□□□ -1.98
SCL1YGL011C TPO4Q12256 659 aa2.68□□□□□ -1.98
SCL1YGL011C YOR020W-AQ3E824 90 aa2.68□□□□□ -1.98
SCL1YGL011C SPT3P06844 337 aa2.67□□□□□ -1.98
SCL1YGL011C ARG80P07249 177 aa2.67□□□□□ -1.98
SCL1YGL011C FCY2P17064 533 aa2.67□□□□□ -1.98
SCL1YGL011C ECM33P38248 429 aaKnown RBP2.67□□□□□ -1.98
SCL1YGL011C FCY21P40039 528 aa2.67□□□□□ -1.98
SCL1YGL011C ALG13P53178 202 aa2.67□□□□□ -1.98
SCL1YGL011C YML096WQ04489 525 aa2.67□□□□□ -1.98
SCL1YGL011C YHR086W-AQ3E746 53 aa2.67□□□□□ -1.98
SCL1YGL011C VMA11P32842 164 aa2.66□□□□□ -1.98
SCL1YGL011C SRY1P36007 326 aa2.66□□□□□ -1.98
SCL1YGL011C NRG2P38082 220 aa2.66□□□□□ -1.98
SCL1YGL011C TCD1P38756 429 aa2.66□□□□□ -1.98
SCL1YGL011C MSS2P40990 351 aa2.66□□□□□ -1.98
SCL1YGL011C RUD3Q12234 484 aaKnown RBP2.66□□□□□ -1.98
SCL1YGL011C SEY1Q99287 776 aa2.66□□□□□ -1.98
SCL1YGL011C URA6P15700 204 aa2.65□□□□□ -1.99
SCL1YGL011C GRX2P17695 143 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms