RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	SSO2	P39926	295 aa		7.71	□□□□□ -1.18
LSM5	YER146W	YIP5	P53108	310 aa		7.71	□□□□□ -1.18
LSM5	YER146W	NSA1	P53136	463 aa	Predicted RBP	7.71	□□□□□ -1.18
LSM5	YER146W	YNR048W	P53740	393 aa		7.71	□□□□□ -1.18
LSM5	YER146W	INN1	P53901	409 aa		7.71	□□□□□ -1.18
LSM5	YER146W	SMX3	P54999	86 aa	Predicted RBP	7.71	□□□□□ -1.18
LSM5	YER146W	RCE1	Q03530	315 aa		7.71	□□□□□ -1.18
LSM5	YER146W	YLR352W	Q06479	807 aa		7.71	□□□□□ -1.18
LSM5	YER146W	MRX9	Q07349	420 aa	Known RBP	7.71	□□□□□ -1.18
LSM5	YER146W	YDL218W	Q07629	317 aa		7.71	□□□□□ -1.18
LSM5	YER146W	USB1	Q12208	290 aa	Known RBP	7.71	□□□□□ -1.18
LSM5	YER146W	CDC28	P00546	298 aa	Known RBP	7.7	□□□□□ -1.18
LSM5	YER146W	AAC1	P04710	309 aa		7.7	□□□□□ -1.18
LSM5	YER146W	PUT1	P09368	476 aa		7.7	□□□□□ -1.18
LSM5	YER146W	RNA14	P25298	677 aa	Known RBP	7.7	□□□□□ -1.18
LSM5	YER146W	CPR4	P25334	318 aa		7.7	□□□□□ -1.18
LSM5	YER146W	MRPS5	P33759	307 aa		7.7	□□□□□ -1.18
LSM5	YER146W	COS8	P38723	381 aa		7.7	□□□□□ -1.18
LSM5	YER146W	YER084W	P40057	128 aa		7.7	□□□□□ -1.18
LSM5	YER146W	GPP1	P41277	250 aa	Known RBP	7.7	□□□□□ -1.18
LSM5	YER146W	CAF16	P43569	289 aa		7.7	□□□□□ -1.18
LSM5	YER146W	YGL260W	P53056	76 aa		7.7	□□□□□ -1.18
LSM5	YER146W	TYW3	P53177	273 aa		7.7	□□□□□ -1.18
LSM5	YER146W	YGR042W	P53227	271 aa		7.7	□□□□□ -1.18
LSM5	YER146W	HHO1	P53551	258 aa		7.7	□□□□□ -1.18
LSM5	YER146W	ELA1	P53861	379 aa	Predicted RBP	7.7	□□□□□ -1.18
LSM5	YER146W	YLR108C	Q12259	485 aa		7.7	□□□□□ -1.18
LSM5	YER146W	TDH2	P00358	332 aa	Known RBP	7.69	□□□□□ -1.18
LSM5	YER146W	TDH1	P00360	332 aa	Known RBP	7.69	□□□□□ -1.18
LSM5	YER146W	HEM4	P06174	275 aa		7.69	□□□□□ -1.18
LSM5	YER146W	HNM1	P19807	563 aa		7.69	□□□□□ -1.18
LSM5	YER146W	IFM1	P25038	676 aa		7.69	□□□□□ -1.18
LSM5	YER146W	RFA3	P26755	122 aa	Known RBP	7.69	□□□□□ -1.18
LSM5	YER146W	REC114	P32841	428 aa		7.69	□□□□□ -1.18
LSM5	YER146W	PDC2	P32896	925 aa		7.69	□□□□□ -1.18
LSM5	YER146W	IDP2	P41939	412 aa		7.69	□□□□□ -1.18
LSM5	YER146W	MOB2	P43563	287 aa		7.69	□□□□□ -1.18
LSM5	YER146W	AVT4	P50944	713 aa		7.69	□□□□□ -1.18
LSM5	YER146W	CGR1	P53188	120 aa		7.69	□□□□□ -1.18
LSM5	YER146W	SRP1	Q02821	542 aa	Known RBP	7.69	□□□□□ -1.18
LSM5	YER146W	PRP8	P33334	2413 aa	Known RBP	7.69	□□□□□ -1.18
LSM5	YER146W	RPP1A	P05318	106 aa	Predicted RBP	7.68	□□□□□ -1.18
LSM5	YER146W	PEX4	P29340	183 aa		7.68	□□□□□ -1.18
LSM5	YER146W	TRR1	P29509	319 aa	Known RBP	7.68	□□□□□ -1.18
LSM5	YER146W	VMA5	P31412	392 aa	Known RBP	7.68	□□□□□ -1.18
LSM5	YER146W	MTC7	P32633	139 aa		7.68	□□□□□ -1.18
LSM5	YER146W	FMT1	P32785	401 aa		7.68	□□□□□ -1.18
LSM5	YER146W	AIM46	P38885	310 aa		7.68	□□□□□ -1.18
LSM5	YER146W	TIF11	P38912	153 aa	Known RBP	7.68	□□□□□ -1.18
LSM5	YER146W	SEN34	P39707	275 aa		7.68	□□□□□ -1.18
LSM5	YER146W	GWT1	P47026	490 aa		7.68	□□□□□ -1.18
LSM5	YER146W	SKP1	P52286	194 aa		7.68	□□□□□ -1.18
LSM5	YER146W	ACS2	P52910	683 aa	Known RBP	7.68	□□□□□ -1.18
LSM5	YER146W	FYV6	P53913	173 aa		7.68	□□□□□ -1.18
LSM5	YER146W	RFU1	Q08003	200 aa		7.68	□□□□□ -1.18
LSM5	YER146W	RPS31	P05759	152 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	GCD1	P09032	578 aa	Predicted RBP	7.67	□□□□□ -1.18
LSM5	YER146W	CDC34	P14682	295 aa		7.67	□□□□□ -1.18
LSM5	YER146W	MAG1	P22134	296 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	DEG1	P31115	442 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	SRB6	P32570	121 aa		7.67	□□□□□ -1.18
LSM5	YER146W	ISC10	P32645	267 aa		7.67	□□□□□ -1.18
LSM5	YER146W	YHL037C	P38733	133 aa		7.67	□□□□□ -1.18
LSM5	YER146W	OST1	P41543	476 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	GLR1	P41921	483 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	YJL016W	P47072	561 aa		7.67	□□□□□ -1.18
LSM5	YER146W	LSM8	P47093	109 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	SSN8	P47821	323 aa		7.67	□□□□□ -1.18
LSM5	YER146W	ALG12	P53730	551 aa		7.67	□□□□□ -1.18
LSM5	YER146W	HAS1	Q03532	505 aa	Known RBP	7.67	□□□□□ -1.18
LSM5	YER146W	SYM1	Q06563	197 aa		7.67	□□□□□ -1.18
LSM5	YER146W	FIT3	Q08907	204 aa		7.67	□□□□□ -1.18
LSM5	YER146W	WSC3	Q12215	556 aa		7.67	□□□□□ -1.18
LSM5	YER146W	RDI1	Q12434	202 aa		7.67	□□□□□ -1.18
LSM5	YER146W	FOL3	Q12676	427 aa	Predicted RBP	7.67	□□□□□ -1.18
LSM5	YER146W	ARO3	P14843	370 aa	Known RBP	7.66	□□□□□ -1.18
LSM5	YER146W	RFA1	P22336	621 aa	Known RBP	7.66	□□□□□ -1.18
LSM5	YER146W	ECM25	P32525	599 aa		7.66	□□□□□ -1.18
LSM5	YER146W	AGA2	P32781	87 aa		7.66	□□□□□ -1.18
LSM5	YER146W	VAM7	P32912	316 aa		7.66	□□□□□ -1.18
LSM5	YER146W	YND1	P40009	630 aa		7.66	□□□□□ -1.18
LSM5	YER146W	ATF1	P40353	525 aa		7.66	□□□□□ -1.18
LSM5	YER146W	SIP18	P50263	79 aa		7.66	□□□□□ -1.18
LSM5	YER146W	RSM27	P53305	110 aa		7.66	□□□□□ -1.18
LSM5	YER146W	GIM3	P53900	129 aa		7.66	□□□□□ -1.18
LSM5	YER146W	VBA1	Q04301	562 aa		7.66	□□□□□ -1.18
LSM5	YER146W	TRM13	Q12383	476 aa		7.66	□□□□□ -1.18
LSM5	YER146W	MET3	P08536	511 aa		7.65	□□□□□ -1.18
LSM5	YER146W	SAG1	P20840	650 aa		7.65	□□□□□ -1.18
LSM5	YER146W	RPI1	P23250	407 aa	Known RBP	7.65	□□□□□ -1.18
LSM5	YER146W	LDS1	P31379	325 aa		7.65	□□□□□ -1.18
LSM5	YER146W	SRY1	P36007	326 aa		7.65	□□□□□ -1.18
LSM5	YER146W	ARC40	P38328	384 aa	Known RBP	7.65	□□□□□ -1.18
LSM5	YER146W	LAG1	P38703	411 aa		7.65	□□□□□ -1.18
LSM5	YER146W	GTT1	P40582	234 aa		7.65	□□□□□ -1.18
LSM5	YER146W	YGR026W	P53217	278 aa		7.65	□□□□□ -1.18
LSM5	YER146W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	not detected
LSM5	YER146W	YMR279C	Q03263	540 aa		7.65	□□□□□ -1.18
LSM5	YER146W	HUT1	Q12520	339 aa		7.65	□□□□□ -1.18
LSM5	YER146W	PET20	Q99373	253 aa		7.65	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms