RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C MRPL39P36533 70 aa1.26□□□□□ -2.21
AFR1YDR085C ERV15P38312 142 aa1.26□□□□□ -2.21
AFR1YDR085C PRM10P42946 383 aa1.26□□□□□ -2.21
AFR1YDR085C SGE1P33335 543 aa1.26□□□□□ -2.21
AFR1YDR085C MEP1P40260 492 aa1.26□□□□□ -2.21
AFR1YDR085C YKE4P40544 346 aa1.26□□□□□ -2.21
AFR1YDR085C RMR1P53060 241 aa1.26□□□□□ -2.21
AFR1YDR085C YDR209CQ03480 137 aa1.26□□□□□ -2.21
AFR1YDR085C RPL9AP05738 191 aaKnown RBP1.25□□□□□ -2.21
AFR1YDR085C OM45P16547 393 aa1.25□□□□□ -2.21
AFR1YDR085C GRX2P17695 143 aaKnown RBP1.25□□□□□ -2.21
AFR1YDR085C YKR045CP36138 183 aa1.25□□□□□ -2.21
AFR1YDR085C VTC1P40046 129 aaRIP-Chip data1.25□□□□□ -2.21not detected
AFR1YDR085C FIS1P40515 155 aa1.25□□□□□ -2.21
AFR1YDR085C RPL9BP51401 191 aaKnown RBP1.25□□□□□ -2.21
AFR1YDR085C YNL046WP53956 172 aa1.25□□□□□ -2.21
AFR1YDR085C NEJ1Q06148 342 aa1.25□□□□□ -2.21
AFR1YDR085C ARR2Q06597 130 aa1.25□□□□□ -2.21
AFR1YDR085C USB1Q12208 290 aaKnown RBP1.25□□□□□ -2.21
AFR1YDR085C SNA3P14359 133 aa1.24□□□□□ -2.21
AFR1YDR085C YPT52P36018 234 aaKnown RBP1.24□□□□□ -2.21
AFR1YDR085C USE1P53146 245 aa1.24□□□□□ -2.21
AFR1YDR085C YPL257WQ08974 193 aa1.24□□□□□ -2.21
AFR1YDR085C UBR2Q07963 1872 aa1.24□□□□□ -2.21
AFR1YDR085C MSW1P04803 379 aa1.24□□□□□ -2.21
AFR1YDR085C MSF1P08425 469 aa1.24□□□□□ -2.21
AFR1YDR085C YBR219CP38317 127 aa1.24□□□□□ -2.21
AFR1YDR085C BIG1P38813 335 aa1.24□□□□□ -2.21
AFR1YDR085C YHR180WP38868 163 aa1.24□□□□□ -2.21
AFR1YDR085C AVT2P39981 480 aa1.24□□□□□ -2.21
AFR1YDR085C GLE2P40066 365 aa1.24□□□□□ -2.21
AFR1YDR085C ATG39Q06159 398 aa1.24□□□□□ -2.21
AFR1YDR085C SDO1Q07953 250 aaKnown RBP1.24□□□□□ -2.21
AFR1YDR085C RNA15P25299 296 aaPredicted RBP1.23□□□□□ -2.21
AFR1YDR085C YGL010WP25338 174 aa1.23□□□□□ -2.21
AFR1YDR085C RPA43P46669 326 aa1.23□□□□□ -2.21
AFR1YDR085C HEM25Q07534 307 aa1.23□□□□□ -2.21
AFR1YDR085C RRS1Q08746 203 aaKnown RBP1.23□□□□□ -2.21
AFR1YDR085C IPP1P00817 287 aaKnown RBP1.22□□□□□ -2.21
AFR1YDR085C NUP49Q02199 472 aa1.22□□□□□ -2.21
AFR1YDR085C CSM4Q08955 156 aa1.22□□□□□ -2.21
AFR1YDR085C YCT1Q12235 531 aa1.22□□□□□ -2.21
AFR1YDR085C HTL1Q9URQ5 78 aa1.22□□□□□ -2.21
AFR1YDR085C YBR220CP38318 560 aa1.22□□□□□ -2.21
AFR1YDR085C YJR056CP47115 236 aa1.22□□□□□ -2.21
AFR1YDR085C MPP6P53725 186 aaPredicted RBP1.22□□□□□ -2.21
AFR1YDR085C BUD25P85052 153 aa1.22□□□□□ -2.21
AFR1YDR085C CSI2Q08054 341 aa1.22□□□□□ -2.21
AFR1YDR085C ERD2P18414 219 aa1.21□□□□□ -2.22
AFR1YDR085C RPF1P38805 295 aaKnown RBP1.21□□□□□ -2.22
AFR1YDR085C BFR1P38934 470 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
AFR1YDR085C AGE2P40529 298 aa1.21□□□□□ -2.22
AFR1YDR085C RHO3Q00245 231 aaKnown RBP1.21□□□□□ -2.22
AFR1YDR085C MSA1Q08471 629 aa1.21□□□□□ -2.22
AFR1YDR085C NIP7Q08962 181 aaKnown RBP1.21□□□□□ -2.22
AFR1YDR085C YPL229WQ99395 206 aa1.21□□□□□ -2.22
AFR1YDR085C RPS5P26783 225 aaKnown RBP1.2□□□□□ -2.22
AFR1YDR085C SVP26P38869 228 aa1.2□□□□□ -2.22
AFR1YDR085C RTT105P40063 208 aa1.2□□□□□ -2.22
AFR1YDR085C YIL001WP40560 513 aa1.2□□□□□ -2.22
AFR1YDR085C YJR079WP47126 109 aa1.2□□□□□ -2.22
AFR1YDR085C YNR062CP53748 327 aa1.2□□□□□ -2.22
AFR1YDR085C MZM1Q03429 123 aaPredicted RBP1.2□□□□□ -2.22
AFR1YDR085C SEI1Q06058 285 aa1.2□□□□□ -2.22
AFR1YDR085C BTS1Q12051 335 aa1.2□□□□□ -2.22
AFR1YDR085C SNU23Q12368 194 aaPredicted RBP1.2□□□□□ -2.22
AFR1YDR085C CYR1P08678 2026 aaKnown RBP1.2□□□□□ -2.22
AFR1YDR085C PET9P18239 318 aaKnown RBP1.2□□□□□ -2.22
AFR1YDR085C ECM33P38248 429 aaKnown RBP1.2□□□□□ -2.22
AFR1YDR085C YHR127WP38833 243 aaKnown RBP1.2□□□□□ -2.22
AFR1YDR085C TOS8P53147 276 aa1.2□□□□□ -2.22
AFR1YDR085C TPO4Q12256 659 aa1.2□□□□□ -2.22
AFR1YDR085C YKL075CP36083 450 aa1.19□□□□□ -2.22
AFR1YDR085C YAR068WP39564 161 aa1.19□□□□□ -2.22
AFR1YDR085C JHD2P47156 728 aaPredicted RBP1.19□□□□□ -2.22
AFR1YDR085C SML1Q04964 104 aa1.19□□□□□ -2.22
AFR1YDR085C YLR162WQ06235 118 aa1.19□□□□□ -2.22
AFR1YDR085C YOR020W-AQ3E824 90 aa1.19□□□□□ -2.22
AFR1YDR085C RPL2AP0CX45 254 aaKnown RBP1.18□□□□□ -2.22
AFR1YDR085C RPL2BP0CX46 254 aaKnown RBP1.18□□□□□ -2.22
AFR1YDR085C HAM1P47119 197 aaKnown RBP1.18□□□□□ -2.22
AFR1YDR085C KAP95Q06142 861 aaKnown RBP1.18□□□□□ -2.22
AFR1YDR085C MSH5Q12175 901 aa1.18□□□□□ -2.22
AFR1YDR085C RSR1P13856 272 aa1.18□□□□□ -2.22
AFR1YDR085C FCY2P17064 533 aa1.18□□□□□ -2.22
AFR1YDR085C FPR1P20081 114 aaKnown RBP1.18□□□□□ -2.22
AFR1YDR085C CAT5P41735 233 aa1.18□□□□□ -2.22
AFR1YDR085C YOR029WQ12243 111 aa1.17□□□□□ -2.22
AFR1YDR085C RRP36Q12481 300 aaPredicted RBP1.17□□□□□ -2.22
AFR1YDR085C YHR139C-AO13536 103 aa1.16□□□□□ -2.22
AFR1YDR085C TCP1P12612 559 aaKnown RBP1.16□□□□□ -2.22
AFR1YDR085C RSM25P40496 264 aa1.16□□□□□ -2.22
AFR1YDR085C RPL33BP41056 107 aaKnown RBP1.16□□□□□ -2.22
AFR1YDR085C FLO9P39712 1322 aa1.16□□□□□ -2.22
AFR1YDR085C MEI4P29467 408 aa1.16□□□□□ -2.22
AFR1YDR085C RPT5P33297 434 aaKnown RBP1.16□□□□□ -2.22
AFR1YDR085C RIB7P33312 244 aa1.16□□□□□ -2.22
AFR1YDR085C UPS2P35200 230 aa1.16□□□□□ -2.22
AFR1YDR085C YBR063CP38083 404 aa1.16□□□□□ -2.22
AFR1YDR085C RPL13BP40212 199 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms