RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	APS1	P35181	156 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	DBP7	P36120	742 aa	Known RBP	4.45	□□□□□ -1.7
SNF11	YDR073W	SWD3	P38123	315 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	SMP1	P38128	452 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	ECM33	P38248	429 aa	Known RBP	4.45	□□□□□ -1.7
SNF11	YDR073W	AME1	P38313	324 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	ECM34	P38728	170 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	ASP1	P38986	381 aa	Predicted RBP	4.45	□□□□□ -1.7
SNF11	YDR073W	YER121W	P40076	114 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	RTC4	P53850	401 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	YLR460C	P54007	376 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	RRP17	Q04031	235 aa	Predicted RBP	4.45	□□□□□ -1.7
SNF11	YDR073W	NOC4	Q06512	552 aa	Predicted RBP	4.45	□□□□□ -1.7
SNF11	YDR073W	YPS3	Q12303	508 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	SWI1	P09547	1314 aa		4.45	□□□□□ -1.7
SNF11	YDR073W	COS2	P0CX12	379 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	COS3	P0CX13	379 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	ECM14	P38836	430 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	YKE4	P40544	346 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	COS4	P43542	379 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	FAR7	P43592	221 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	YGL034C	P53186	121 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	YNL247W	P53852	767 aa	Known RBP	4.44	□□□□□ -1.7
SNF11	YDR073W	YNL140C	P53910	189 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	NRK1	P53915	240 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	TLG2	Q08144	397 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	MSA1	Q08471	629 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	MDM32	Q12171	622 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	YAL067W-A	Q8TGK6	75 aa		4.44	□□□□□ -1.7
SNF11	YDR073W	IPP1	P00817	287 aa	Known RBP	4.43	□□□□□ -1.7
SNF11	YDR073W	CAX4	P53223	239 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	ACT1	P60010	375 aa	Known RBP	4.43	□□□□□ -1.7
SNF11	YDR073W	YML108W	Q03759	105 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	YLR036C	Q07986	203 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	USB1	Q12208	290 aa	Known RBP	4.43	□□□□□ -1.7
SNF11	YDR073W	YPR011C	Q12251	326 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	AGC1	Q12482	902 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	YPL229W	Q99395	206 aa		4.43	□□□□□ -1.7
SNF11	YDR073W	FLO11	P08640	1367 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	YPT52	P36018	234 aa	Known RBP	4.42	□□□□□ -1.7
SNF11	YDR073W	SEO1	P39709	593 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	SYS1	P41544	203 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	YPI1	P43587	155 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	TMA22	P47089	198 aa	Predicted RBP	4.42	□□□□□ -1.7
SNF11	YDR073W	ERV29	P53337	310 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	YML096W	Q04489	525 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	GRX8	Q05926	109 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	ECM19	Q06011	112 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	SLD7	Q08457	257 aa		4.42	□□□□□ -1.7
SNF11	YDR073W	FIG1	P38224	298 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	CAT5	P41735	233 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	YJL028W	P47062	111 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	IMP4	P53941	290 aa	Known RBP	4.41	□□□□□ -1.7
SNF11	YDR073W	YPL039W	Q03080	316 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	YLR179C	Q06252	201 aa	Known RBP	4.41	□□□□□ -1.7
SNF11	YDR073W	MCH1	Q07376	486 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	ATG5	Q12380	294 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	LSO2	Q3E772	92 aa	Known RBP	4.41	□□□□□ -1.7
SNF11	YDR073W	IGO2	Q9P305	131 aa		4.41	□□□□□ -1.7
SNF11	YDR073W	CPT1	P17898	393 aa		4.4	□□□□□ -1.71
SNF11	YDR073W	TAH1	P25638	111 aa	Predicted RBP	4.4	□□□□□ -1.71
SNF11	YDR073W	MRPL27	P36526	146 aa	Predicted RBP	4.4	□□□□□ -1.71
SNF11	YDR073W	YBL081W	P38180	368 aa	Known RBP	4.4	□□□□□ -1.71
SNF11	YDR073W	PDS1	P40316	373 aa	Predicted RBP	4.4	□□□□□ -1.71
SNF11	YDR073W	PRM8	P53174	237 aa		4.4	□□□□□ -1.71
SNF11	YDR073W	MRPS16	Q02608	121 aa		4.4	□□□□□ -1.71
SNF11	YDR073W	PEX12	Q04370	399 aa		4.4	□□□□□ -1.71
SNF11	YDR073W	EMI1	Q04406	187 aa		4.4	□□□□□ -1.71
SNF11	YDR073W	MRS1	P07266	363 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	ISY1	P21374	235 aa	Predicted RBP	4.39	□□□□□ -1.71
SNF11	YDR073W	TRX3	P25372	127 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	ECM13	P38195	257 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	YER189W	P40104	122 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	AIM25	P47140	327 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	YOL024W	Q08172	172 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	TIM22	Q12328	207 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	PST1	Q12355	444 aa		4.39	□□□□□ -1.71
SNF11	YDR073W	YEL009C-A	A0A023PZF2	135 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	RPB9	P27999	122 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	BMH1	P29311	267 aa	Known RBP	4.38	□□□□□ -1.71
SNF11	YDR073W	SPL2	P38839	148 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	TEM1	P38987	245 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	UFD1	P53044	361 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	LSM7	P53905	115 aa	Known RBP	4.38	□□□□□ -1.71
SNF11	YDR073W	TVP15	Q03860	143 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	YDL211C	Q12121	372 aa		4.38	□□□□□ -1.71
SNF11	YDR073W	NUP157	P40064	1391 aa	Known RBP	4.38	□□□□□ -1.71
SNF11	YDR073W	RPL25	P04456	142 aa	Known RBP	4.37	□□□□□ -1.71
SNF11	YDR073W	YHL044W	P38727	235 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	UFE1	P41834	346 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	PGU1	P47180	361 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	YMD8	Q03697	442 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	YOL019W	Q08157	551 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	PAN1	P32521	1480 aa		4.37	□□□□□ -1.71
SNF11	YDR073W	SEC4	P07560	215 aa	Known RBP	4.36	□□□□□ -1.71
SNF11	YDR073W	SEC22	P22214	214 aa		4.36	□□□□□ -1.71
SNF11	YDR073W	MGT1	P26188	188 aa		4.36	□□□□□ -1.71
SNF11	YDR073W	RMD6	P39975	231 aa		4.36	□□□□□ -1.71
SNF11	YDR073W	RSM27	P53305	110 aa		4.36	□□□□□ -1.71
SNF11	YDR073W	PET191	Q02772	108 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 154.7 ms