RNA–Protein interactions for RNA: YBR102C

EXO84, Transcript of Exocyst subunit with dual roles in exocytosis and spliceosome assembly, yeast

Gene EXO84, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO84	YBR102C	BXI1	P48558	297 aa		2.55	□□□□□ -2
EXO84	YBR102C	HSK3	P69852	69 aa		2.55	□□□□□ -2
EXO84	YBR102C	PET191	Q02772	108 aa		2.55	□□□□□ -2
EXO84	YBR102C	HNT1	Q04344	158 aa	Known RBP	2.55	□□□□□ -2
EXO84	YBR102C	IGO2	Q9P305	131 aa		2.55	□□□□□ -2
EXO84	YBR102C	BNR1	P40450	1375 aa		2.55	□□□□□ -2
EXO84	YBR102C	RPL23A	P0CX41	137 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	RPL23B	P0CX42	137 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	SAM2	P19358	384 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	TRX3	P25372	127 aa		2.54	□□□□□ -2
EXO84	YBR102C	ATG15	P25641	520 aa		2.54	□□□□□ -2
EXO84	YBR102C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
EXO84	YBR102C	TRM7	P38238	310 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	IPI1	P38803	334 aa	Predicted RBP	2.54	□□□□□ -2
EXO84	YBR102C	NVJ1	P38881	321 aa		2.54	□□□□□ -2
EXO84	YBR102C	PDS1	P40316	373 aa	Predicted RBP	2.54	□□□□□ -2
EXO84	YBR102C	YIL067C	P40514	678 aa		2.54	□□□□□ -2
EXO84	YBR102C	RTS2	P40962	232 aa		2.54	□□□□□ -2
EXO84	YBR102C	UBC12	P52491	188 aa		2.54	□□□□□ -2
EXO84	YBR102C	YGL039W	P53183	348 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	SWP1	Q02795	286 aa		2.54	□□□□□ -2
EXO84	YBR102C	RSC9	Q03124	581 aa		2.54	□□□□□ -2
EXO84	YBR102C	ERV2	Q12284	196 aa		2.54	□□□□□ -2
EXO84	YBR102C	Q0144	Q9ZZW2	109 aa		2.54	□□□□□ -2
EXO84	YBR102C	YOR093C	Q12275	1648 aa		2.54	□□□□□ -2
EXO84	YBR102C	MDM10	P18409	493 aa		2.54	□□□□□ -2
EXO84	YBR102C	AGA1	P32323	725 aa		2.54	□□□□□ -2
EXO84	YBR102C	KTI12	P34253	313 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	CSG2	P35206	410 aa		2.54	□□□□□ -2
EXO84	YBR102C	MTC6	P38849	526 aa		2.54	□□□□□ -2
EXO84	YBR102C	LSM4	P40070	187 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	PAN6	P40459	309 aa		2.54	□□□□□ -2
EXO84	YBR102C	PCI8	P40512	444 aa		2.54	□□□□□ -2
EXO84	YBR102C	EGT2	P42835	1041 aa		2.54	□□□□□ -2
EXO84	YBR102C	RPL15B	P54780	204 aa	Predicted RBP	2.54	□□□□□ -2
EXO84	YBR102C	TIM44	Q01852	431 aa		2.54	□□□□□ -2
EXO84	YBR102C	YMR181C	Q03231	154 aa		2.54	□□□□□ -2
EXO84	YBR102C	TDA1	Q03533	586 aa		2.54	□□□□□ -2
EXO84	YBR102C	YML018C	Q03730	393 aa		2.54	□□□□□ -2
EXO84	YBR102C	CSN9	Q03981	162 aa		2.54	□□□□□ -2
EXO84	YBR102C	HRT3	Q12347	344 aa		2.54	□□□□□ -2
EXO84	YBR102C	CHC1	P22137	1653 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	SEC7	P11075	2009 aa	Known RBP	2.54	□□□□□ -2
EXO84	YBR102C	RPS14A	P06367	137 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	RPL4A	P10664	362 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	RPS1A	P33442	255 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	UTP11	P34247	250 aa	Predicted RBP	2.53	□□□□□ -2
EXO84	YBR102C	PRS3	P38689	320 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	RPS14B	P39516	138 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	CCC1	P47818	322 aa		2.53	□□□□□ -2
EXO84	YBR102C	RPL4B	P49626	362 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	PRM8	P53174	237 aa		2.53	□□□□□ -2
EXO84	YBR102C	COG7	P53195	279 aa		2.53	□□□□□ -2
EXO84	YBR102C	TPC1	P53257	314 aa		2.53	□□□□□ -2
EXO84	YBR102C	YNL184C	P53876	108 aa		2.53	□□□□□ -2
EXO84	YBR102C	SDC1	Q03323	175 aa		2.53	□□□□□ -2
EXO84	YBR102C	YET2	Q04210	160 aa		2.53	□□□□□ -2
EXO84	YBR102C	HCR1	Q05775	265 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	YLR030W	Q07967	263 aa		2.53	□□□□□ -2
EXO84	YBR102C	SNX3	Q08826	162 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	TRM10	Q12400	293 aa		2.53	□□□□□ -2
EXO84	YBR102C	TFC7	Q12415	435 aa		2.53	□□□□□ -2
EXO84	YBR102C	PEX11	Q12462	236 aa		2.53	□□□□□ -2
EXO84	YBR102C	RIB3	Q99258	208 aa		2.53	□□□□□ -2
EXO84	YBR102C	CAT8	P39113	1433 aa		2.53	□□□□□ -2
EXO84	YBR102C	CDC8	P00572	216 aa		2.53	□□□□□ -2
EXO84	YBR102C	HEM4	P06174	275 aa		2.53	□□□□□ -2
EXO84	YBR102C	CMD1	P06787	147 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	SEC4	P07560	215 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	ERD2	P18414	219 aa		2.53	□□□□□ -2
EXO84	YBR102C	EPT1	P22140	391 aa		2.53	□□□□□ -2
EXO84	YBR102C	MRPL20	P22354	195 aa	Predicted RBP	2.53	□□□□□ -2
EXO84	YBR102C	HSP30	P25619	332 aa		2.53	□□□□□ -2
EXO84	YBR102C	YCR090C	P25654	182 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	GPX1	P36014	167 aa		2.53	□□□□□ -2
EXO84	YBR102C	YHL049C	P38722	271 aa		2.53	□□□□□ -2
EXO84	YBR102C	CHL4	P38907	458 aa		2.53	□□□□□ -2
EXO84	YBR102C	PEX22	P39718	180 aa		2.53	□□□□□ -2
EXO84	YBR102C	YMR144W	P40214	342 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	YNL234W	P53857	426 aa		2.53	□□□□□ -2
EXO84	YBR102C	TDA7	P53882	636 aa	Predicted RBP	2.53	□□□□□ -2
EXO84	YBR102C	YNL046W	P53956	172 aa		2.53	□□□□□ -2
EXO84	YBR102C	YMR010W	Q03687	405 aa		2.53	□□□□□ -2
EXO84	YBR102C	PKR1	Q03880	122 aa	Known RBP	2.53	□□□□□ -2
EXO84	YBR102C	FAR10	Q06001	478 aa		2.53	□□□□□ -2
EXO84	YBR102C	YLR046C	Q12253	270 aa		2.53	□□□□□ -2
EXO84	YBR102C	PCL9	Q12477	304 aa		2.53	□□□□□ -2
EXO84	YBR102C	CSR2	Q12734	1121 aa		2.53	□□□□□ -2
EXO84	YBR102C	TRM3	Q07527	1436 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	RPL42A	P0CX27	106 aa	Known RBP	2.52	□□□□□ -2.01
EXO84	YBR102C	RPL42B	P0CX28	106 aa	Known RBP	2.52	□□□□□ -2.01
EXO84	YBR102C	CPR4	P25334	318 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	BUB2	P26448	306 aa	Predicted RBP	2.52	□□□□□ -2.01
EXO84	YBR102C	SIP2	P34164	415 aa	Known RBP	2.52	□□□□□ -2.01
EXO84	YBR102C	MRP21	P38175	177 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	MBA1	P38300	278 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	RRG9	P40156	214 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	AIM25	P47140	327 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	VPS25	P47142	202 aa		2.52	□□□□□ -2.01
EXO84	YBR102C	COQ5	P49017	307 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms