RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C EMC5P40540 141 aa3.62□□□□□ -1.83
PTA1YAL043C ALG9P53868 555 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C NCE101Q02820 53 aa3.62□□□□□ -1.83
PTA1YAL043C LRS4Q04087 347 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C MHR1Q06630 226 aa3.62□□□□□ -1.83
PTA1YAL043C SRL2Q12020 392 aa3.62□□□□□ -1.83
PTA1YAL043C PAR32Q12515 295 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C YML003WP0CF16 290 aa3.61□□□□□ -1.83
PTA1YAL043C NAM2P11325 894 aa3.61□□□□□ -1.83
PTA1YAL043C IMG2P25642 146 aaPredicted RBP3.61□□□□□ -1.83
PTA1YAL043C SNC2P33328 115 aa3.61□□□□□ -1.83
PTA1YAL043C SLC1P33333 303 aa3.61□□□□□ -1.83
PTA1YAL043C COS9P36034 407 aa3.61□□□□□ -1.83
PTA1YAL043C NTC20P38302 140 aaPredicted RBP3.61□□□□□ -1.83
PTA1YAL043C ASP1P38986 381 aaPredicted RBP3.61□□□□□ -1.83
PTA1YAL043C ELO1P39540 310 aa3.61□□□□□ -1.83
PTA1YAL043C TAX4P47030 604 aa3.61□□□□□ -1.83
PTA1YAL043C ASK10P48361 1146 aa3.61□□□□□ -1.83
PTA1YAL043C BUL1P48524 976 aa3.61□□□□□ -1.83
PTA1YAL043C NRK1P53915 240 aa3.61□□□□□ -1.83
PTA1YAL043C RNH201P53942 307 aa3.61□□□□□ -1.83
PTA1YAL043C MRP51Q02950 344 aa3.61□□□□□ -1.83
PTA1YAL043C BNA7Q04066 261 aa3.61□□□□□ -1.83
PTA1YAL043C ECM18Q04623 453 aa3.61□□□□□ -1.83
PTA1YAL043C PAL1Q05518 499 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C STP3Q05937 343 aa3.61□□□□□ -1.83
PTA1YAL043C YPR147CQ06522 304 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
PTA1YAL043C YCL001W-BQ96VH2 84 aa3.61□□□□□ -1.83
PTA1YAL043C SEC16P48415 2195 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C YPR117WQ06116 2489 aa3.61□□□□□ -1.83
PTA1YAL043C GDH1P07262 454 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C UBI4P0CG63 381 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C RPL40AP0CH08 128 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C RPL40BP0CH09 128 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C MATALPHA1P0CY06 175 aa3.61□□□□□ -1.83
PTA1YAL043C HMLALPHA1P0CY07 175 aa3.61□□□□□ -1.83
PTA1YAL043C RPB3P16370 318 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C NUP1P20676 1076 aa3.61□□□□□ -1.83
PTA1YAL043C SEF1P34228 1148 aa3.61□□□□□ -1.83
PTA1YAL043C ELF1P36053 145 aa3.61□□□□□ -1.83
PTA1YAL043C SRP102P36057 244 aaPredicted RBP3.61□□□□□ -1.83
PTA1YAL043C MGE1P38523 228 aa3.61□□□□□ -1.83
PTA1YAL043C YJL193WP39542 402 aa3.61□□□□□ -1.83
PTA1YAL043C YAL037WP39728 267 aa3.61□□□□□ -1.83
PTA1YAL043C AVT7P40501 490 aa3.61□□□□□ -1.83
PTA1YAL043C MOG1P47123 218 aa3.61□□□□□ -1.83
PTA1YAL043C PNC1P53184 216 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C MRPL19P53875 158 aa3.61□□□□□ -1.83
PTA1YAL043C TIM10P87108 93 aa3.61□□□□□ -1.83
PTA1YAL043C VPS28Q02767 242 aa3.61□□□□□ -1.83
PTA1YAL043C CAB5Q03941 241 aa3.61□□□□□ -1.83
PTA1YAL043C GMC1Q04399 608 aa3.61□□□□□ -1.83
PTA1YAL043C VBA4Q04602 768 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C CRR1Q05790 422 aa3.61□□□□□ -1.83
PTA1YAL043C ENB1Q08299 606 aa3.61□□□□□ -1.83
PTA1YAL043C SRO7Q12038 1033 aa3.61□□□□□ -1.83
PTA1YAL043C YPR145C-AQ2V2P0 78 aa3.61□□□□□ -1.83
PTA1YAL043C PET20Q99373 253 aa3.61□□□□□ -1.83
PTA1YAL043C ACC1Q00955 2233 aaKnown RBP3.61□□□□□ -1.83
PTA1YAL043C CWP1P28319 239 aa3.6□□□□□ -1.83
PTA1YAL043C EMP70P32802 667 aa3.6□□□□□ -1.83
PTA1YAL043C FRM2P37261 193 aa3.6□□□□□ -1.83
PTA1YAL043C YHR210CP38893 341 aa3.6□□□□□ -1.83
PTA1YAL043C PRP39P39682 629 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C SHO1P40073 367 aa3.6□□□□□ -1.83
PTA1YAL043C SWM2P40342 146 aa3.6□□□□□ -1.83
PTA1YAL043C SYS1P41544 203 aa3.6□□□□□ -1.83
PTA1YAL043C YGL235WP53071 178 aa3.6□□□□□ -1.83
PTA1YAL043C YGL204CP53089 101 aa3.6□□□□□ -1.83
PTA1YAL043C SOK2P53438 785 aaPredicted RBP3.6□□□□□ -1.83
PTA1YAL043C SUN4P53616 420 aa3.6□□□□□ -1.83
PTA1YAL043C FMP41P53889 259 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C SWS2P53937 143 aa3.6□□□□□ -1.83
PTA1YAL043C EST3Q03096 181 aa3.6□□□□□ -1.83
PTA1YAL043C BNA5Q05979 453 aa3.6□□□□□ -1.83
PTA1YAL043C THI73Q07904 523 aa3.6□□□□□ -1.83
PTA1YAL043C RAD28Q12021 506 aa3.6□□□□□ -1.83
PTA1YAL043C HBN1Q96VH4 193 aa3.6□□□□□ -1.83
PTA1YAL043C RPL25P04456 142 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C COX9P07255 59 aa3.6□□□□□ -1.83
PTA1YAL043C YFR010W-AP0C5N0 62 aa3.6□□□□□ -1.83
PTA1YAL043C IMG1P25626 169 aa3.6□□□□□ -1.83
PTA1YAL043C MSK1P32048 576 aa3.6□□□□□ -1.83
PTA1YAL043C SIP1P32578 815 aa3.6□□□□□ -1.83
PTA1YAL043C RPL14AP36105 138 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C RPL14BP38754 138 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C SUR2P38992 349 aa3.6□□□□□ -1.83
PTA1YAL043C YIL152WP40455 235 aa3.6□□□□□ -1.83
PTA1YAL043C BUD8P41698 603 aa3.6□□□□□ -1.83
PTA1YAL043C VMA21P41806 77 aa3.6□□□□□ -1.83
PTA1YAL043C YJR011CP47086 261 aaPredicted RBP3.6□□□□□ -1.83
PTA1YAL043C AAH1P53909 347 aa3.6□□□□□ -1.83
PTA1YAL043C YLR152CP54072 576 aa3.6□□□□□ -1.83
PTA1YAL043C RHO3Q00245 231 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C GIS1Q03833 894 aa3.6□□□□□ -1.83
PTA1YAL043C HNT1Q04344 158 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C SEC13Q04491 297 aaKnown RBP3.6□□□□□ -1.83
PTA1YAL043C MRPL1Q04599 285 aa3.6□□□□□ -1.83
PTA1YAL043C SMA2Q04658 369 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms