RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	ATG22	P25568	528 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	HOM6	P31116	359 aa	Known RBP	4.08	□□□□□ -1.76
SWC3	YAL011W	FUN26	P31381	517 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	YMC1	P32331	307 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	YEF1	P32622	495 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	ECM15	P35195	104 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	SRX1	P36077	127 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	WSC4	P38739	605 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	HPA3	P39979	161 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	FMP52	P40008	231 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	SHO1	P40073	367 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	TPN1	P53099	579 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	YGL101W	P53144	215 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	TPC1	P53257	314 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	OKP1	P53298	406 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	ERV29	P53337	310 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	TDA1	Q03533	586 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	YMR315W	Q04869	349 aa	Known RBP	4.08	□□□□□ -1.76
SWC3	YAL011W	YOR289W	Q12012	251 aa	Predicted RBP	4.08	□□□□□ -1.76
SWC3	YAL011W	TIR4	Q12218	487 aa	Predicted RBP	4.08	□□□□□ -1.76
SWC3	YAL011W	CYC1	P00044	109 aa	Predicted RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	NAM2	P11325	894 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	DPM1	P14020	267 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	PHO80	P20052	293 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	PRE7	P23724	241 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	MXR2	P25566	168 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	AHC2	P25649	128 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	HYM1	P32464	399 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SWC3	YAL011W	IES6	P32617	166 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	VAM7	P32912	316 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	TMA19	P35691	167 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	YOR062C	P36025	268 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	TRR2	P38816	342 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	ANS1	P38832	159 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	PEX7	P39108	375 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SAS2	P40963	338 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	LSM7	P53905	115 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	SWS2	P53937	143 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YLR460C	P54007	376 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YMR252C	Q04814	134 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	IRC13	Q08630	104 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YOR283W	Q12040	230 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	YDL177C	Q12257	170 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	PET20	Q99373	253 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	BLM10	P43583	2143 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	URA6	P15700	204 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	STF2	P16965	84 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	ERD2	P18414	219 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	EXG1	P23776	448 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	TRR1	P29509	319 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	SNC1	P31109	117 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	MTR2	P34232	184 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	JEN1	P36035	616 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SWC3	YAL011W	PAU24	P38155	120 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	TCM62	P38228	572 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	YBR242W	P38331	238 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SRP14	P38985	146 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YER184C	P39961	794 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SLM1	P40485	686 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SNX4	P47057	423 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	APS3	P47064	194 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YJR056C	P47115	236 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SEH1	P53011	349 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	DML1	Q03652	475 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	SNT309	Q06091	175 aa	Predicted RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	TPO3	Q06451	622 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	YPR091C	Q06833	770 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SWC3	YAL011W	ATG41	Q12048	136 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	MDM32	Q12171	622 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	DET1	Q99288	334 aa	Known RBP	4.07	□□□□□ -1.76
SWC3	YAL011W	HFA1	P32874	2273 aa		4.07	□□□□□ -1.76
SWC3	YAL011W	GLT1	Q12680	2145 aa	Known RBP	4.06	□□□□□ -1.76
SWC3	YAL011W	YGL041W-A	P0C5N3	154 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	PET54	P10834	293 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	YCR102C	P25608	368 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	ACB1	P31787	87 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	MRPS5	P33759	307 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	CPR5	P35176	225 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	VBA2	P38358	474 aa	Known RBP	4.06	□□□□□ -1.76
SWC3	YAL011W	PRS2	P38620	318 aa	Known RBP	4.06	□□□□□ -1.76
SWC3	YAL011W	YER079W	P40052	210 aa	Known RBP	4.06	□□□□□ -1.76
SWC3	YAL011W	MNN5	P46982	586 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	MGA1	P53050	456 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	NIF3	P53081	288 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	YGL204C	P53089	101 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	PAU12	P53343	120 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	YNR062C	P53748	327 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	SSK1	Q07084	712 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	TMS1	Q12116	473 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	YOR214C	Q12282	236 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	BBP1	Q12365	385 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	NPC2	Q12408	173 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	YBR298C-A	Q8TGK4	73 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	FMP27	Q06179	2628 aa		4.06	□□□□□ -1.76
SWC3	YAL011W	HIS3	P06633	220 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	RAD52	P06778	471 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms