RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 USB1Q12208 290 aaKnown RBP0.8□□□□□ -2.28
snR41snR41 RPC40P07703 335 aaKnown RBP0.79□□□□□ -2.28
snR41snR41 POF1P25576 258 aa0.79□□□□□ -2.28
snR41snR41 CSM1P25651 190 aa0.79□□□□□ -2.28
snR41snR41 EBP2P36049 427 aaKnown RBP0.79□□□□□ -2.28
snR41snR41 HEK2P38199 381 aaKnown RBP RIP-Chip data0.79□□□□□ -2.28not detected
snR41snR41 YHR125WP38831 101 aa0.79□□□□□ -2.28
snR41snR41 RPL13BP40212 199 aaKnown RBP0.79□□□□□ -2.28
snR41snR41 YKE4P40544 346 aa0.79□□□□□ -2.28
snR41snR41 YGL185CP53100 379 aa0.79□□□□□ -2.28
snR41snR41 YGR219WP53307 113 aa0.79□□□□□ -2.28
snR41snR41 RIO1Q12196 484 aaKnown RBP0.79□□□□□ -2.28
snR41snR41 YPR011CQ12251 326 aa0.79□□□□□ -2.28
snR41snR41 RPL13AQ12690 199 aaPredicted RBP0.79□□□□□ -2.28
snR41snR41 ERV15P38312 142 aa0.78□□□□□ -2.28
snR41snR41 SPO19Q03029 223 aa0.78□□□□□ -2.28
snR41snR41 YDR286CQ05530 114 aa0.78□□□□□ -2.28
snR41snR41 ARV1Q06541 321 aa0.78□□□□□ -2.28
snR41snR41 BBP1Q12365 385 aa0.78□□□□□ -2.28
snR41snR41 SPT7P35177 1332 aa0.78□□□□□ -2.28
snR41snR41 UGA1P17649 471 aa0.77□□□□□ -2.29
snR41snR41 OAC1P32332 324 aa0.77□□□□□ -2.29
snR41snR41 SVP26P38869 228 aa0.77□□□□□ -2.29
snR41snR41 YER189WP40104 122 aa0.77□□□□□ -2.29
snR41snR41 YGL034CP53186 121 aa0.77□□□□□ -2.29
snR41snR41 LSB1P53281 241 aa0.77□□□□□ -2.29
snR41snR41 YNL260CP53846 198 aa0.77□□□□□ -2.29
snR41snR41 SME1Q12330 94 aaPredicted RBP0.77□□□□□ -2.29
snR41snR41 YBL008W-AQ3E821 79 aa0.77□□□□□ -2.29
snR41snR41 CYR1P08678 2026 aaKnown RBP0.76□□□□□ -2.29
snR41snR41 YLR462WO13556 202 aa0.76□□□□□ -2.29
snR41snR41 TPM1P17536 199 aaKnown RBP0.76□□□□□ -2.29
snR41snR41 YEL075CP39972 122 aa0.76□□□□□ -2.29
snR41snR41 MAL13P53338 473 aa0.76□□□□□ -2.29
snR41snR41 STH1P32597 1359 aa0.75□□□□□ -2.29
snR41snR41 CPA1P07258 411 aaKnown RBP0.75□□□□□ -2.29
snR41snR41 HSM3P38348 480 aa0.75□□□□□ -2.29
snR41snR41 PEX18P38855 283 aa0.75□□□□□ -2.29
snR41snR41 NEJ1Q06148 342 aa0.75□□□□□ -2.29
snR41snR41 SSH1P38353 490 aaKnown RBP0.74□□□□□ -2.29
snR41snR41 TCD1P38756 429 aa0.74□□□□□ -2.29
snR41snR41 YNR062CP53748 327 aa0.74□□□□□ -2.29
snR41snR41 ERV41Q04651 352 aa0.74□□□□□ -2.29
snR41snR41 SML1Q04964 104 aa0.74□□□□□ -2.29
snR41snR41 FAR8Q05040 523 aa0.74□□□□□ -2.29
snR41snR41 VAR1P02381 398 aa0.73□□□□□ -2.29
snR41snR41 YER188C-AP0C0V2 99 aa0.73□□□□□ -2.29
snR41snR41 KDX1P36005 433 aa0.73□□□□□ -2.29
snR41snR41 AGE2P40529 298 aa0.73□□□□□ -2.29
snR41snR41 DSN1P40568 576 aa0.73□□□□□ -2.29
snR41snR41 SIR4P11978 1358 aa0.72□□□□□ -2.29
snR41snR41 RPL9AP05738 191 aaKnown RBP0.72□□□□□ -2.29
snR41snR41 TRX1P22217 103 aaKnown RBP0.72□□□□□ -2.29
snR41snR41 YSR3P23501 404 aa0.72□□□□□ -2.29
snR41snR41 OSW5P40219 148 aa0.72□□□□□ -2.29
snR41snR41 GCD14P46959 383 aaPredicted RBP0.72□□□□□ -2.29
snR41snR41 RPL9BP51401 191 aaKnown RBP0.72□□□□□ -2.29
snR41snR41 ARR2Q06597 130 aa0.72□□□□□ -2.29
snR41snR41 SNF8Q12483 233 aa0.72□□□□□ -2.29
snR41snR41 GPA2P10823 449 aa0.71□□□□□ -2.3
snR41snR41 GRX2P17695 143 aaKnown RBP0.71□□□□□ -2.3
snR41snR41 MEK1P24719 497 aaPredicted RBP0.71□□□□□ -2.3
snR41snR41 YHR180WP38868 163 aa0.71□□□□□ -2.3
snR41snR41 YIL001WP40560 513 aa0.71□□□□□ -2.3
snR41snR41 FMP33P46998 180 aa0.71□□□□□ -2.3
snR41snR41 TOS8P53147 276 aa0.71□□□□□ -2.3
snR41snR41 YDR124WQ04608 324 aa0.71□□□□□ -2.3
snR41snR41 YLR179CQ06252 201 aaKnown RBP0.71□□□□□ -2.3
snR41snR41 VMA11P32842 164 aa0.7□□□□□ -2.3
snR41snR41 BLI1P35727 113 aa0.7□□□□□ -2.3
snR41snR41 MSA2P36157 363 aa0.7□□□□□ -2.3
snR41snR41 MRX5P47007 382 aa0.7□□□□□ -2.3
snR41snR41 MRH4P53166 561 aa0.7□□□□□ -2.3
snR41snR41 YLR030WQ07967 263 aa0.7□□□□□ -2.3
snR41snR41 FLO9P39712 1322 aa0.69□□□□□ -2.3
snR41snR41 MSW1P04803 379 aa0.69□□□□□ -2.3
snR41snR41 PET9P18239 318 aaKnown RBP0.69□□□□□ -2.3
snR41snR41 PNC1P53184 216 aaKnown RBP0.69□□□□□ -2.3
snR41snR41 GTR2P53290 341 aa0.69□□□□□ -2.3
snR41snR41 REX3Q12090 404 aa0.69□□□□□ -2.3
snR41snR41 SWI1P09547 1314 aa0.68□□□□□ -2.3
snR41snR41 ERG24P32462 438 aaKnown RBP0.68□□□□□ -2.3
snR41snR41 FZO1P38297 855 aa0.68□□□□□ -2.3
snR41snR41 THO1P40040 218 aaKnown RBP0.68□□□□□ -2.3
snR41snR41 RPL37AP49166 88 aaKnown RBP0.68□□□□□ -2.3
snR41snR41 YGL159WP53110 370 aa0.68□□□□□ -2.3
snR41snR41 HEM25Q07534 307 aa0.68□□□□□ -2.3
snR41snR41 SYC1Q08553 188 aaPredicted RBP0.68□□□□□ -2.3
snR41snR41 ERV29P53337 310 aa0.67□□□□□ -2.3
snR41snR41 MPA43P53583 542 aaPredicted RBP0.67□□□□□ -2.3
snR41snR41 GOT1Q03554 138 aa0.67□□□□□ -2.3
snR41snR41 RRS1Q08746 203 aaKnown RBP0.67□□□□□ -2.3
snR41snR41 TPO4Q12256 659 aa0.67□□□□□ -2.3
snR41snR41 YPL119C-AQ3E751 87 aa0.67□□□□□ -2.3
snR41snR41 SNA3P14359 133 aa0.66□□□□□ -2.3
snR41snR41 MET16P18408 261 aaPredicted RBP0.66□□□□□ -2.3
snR41snR41 EHD3P28817 500 aa0.66□□□□□ -2.3
snR41snR41 DDI1P40087 428 aa0.66□□□□□ -2.3
snR41snR41 JHD2P47156 728 aaPredicted RBP0.66□□□□□ -2.3
snR41snR41 RMR1P53060 241 aa0.66□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 174 ms