RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	YDR102C	Q03864	110 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	VBA4	Q04602	768 aa	Known RBP	4.25	□□□□□ -1.73
NHP6A	YPR052C	YLR224W	Q05947	369 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	YOR385W	Q08909	290 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	NIP7	Q08962	181 aa	Known RBP	4.25	□□□□□ -1.73
NHP6A	YPR052C	GRE1	Q08969	168 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	RTR2	Q12378	196 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
NHP6A	YPR052C	FMP16	Q12497	93 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	YHR214C-E	Q8TGK0	99 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	FSH3	Q99369	266 aa		4.25	□□□□□ -1.73
NHP6A	YPR052C	YLR358C	O13565	187 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	SCEI	P03882	235 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	GCD1	P09032	578 aa	Predicted RBP	4.24	□□□□□ -1.73
NHP6A	YPR052C	ACB1	P31787	87 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	YKL063C	P35725	167 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	FRM2	P37261	193 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	GEP4	P38812	185 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	VMA7	P39111	118 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	AVT7	P40501	490 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	ERJ5	P43613	295 aa	Predicted RBP	4.24	□□□□□ -1.73
NHP6A	YPR052C	CIN2	P46670	268 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	SNX4	P47057	423 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	ECM27	P47144	725 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	MSY1	P48527	492 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	BXI1	P48558	297 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	LYS5	P50113	272 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	RSM27	P53305	110 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	AAH1	P53909	347 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	ARG5,6	Q01217	863 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	RVB1	Q03940	463 aa	Known RBP	4.24	□□□□□ -1.73
NHP6A	YPR052C	YGL194C-A	Q2V2P6	80 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	Q0297	Q9ZZV8	51 aa		4.24	□□□□□ -1.73
NHP6A	YPR052C	GLT1	Q12680	2145 aa	Known RBP	4.24	□□□□□ -1.73
NHP6A	YPR052C	HEM4	P06174	275 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	PUT1	P09368	476 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	URA6	P15700	204 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	HNM1	P19807	563 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	MDH2	P22133	377 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	HXT2	P23585	541 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	MRP17	P28778	131 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	ARO4	P32449	370 aa	Known RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	MSS1	P32559	526 aa	Predicted RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	MRPL27	P36526	146 aa	Predicted RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	AIM3	P38266	947 aa	Known RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	UMP1	P38293	148 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	YHL044W	P38727	235 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	PUG1	P40100	303 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	OKP1	P53298	406 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	SOK2	P53438	785 aa	Predicted RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
NHP6A	YPR052C	YMR265C	Q03508	461 aa	Known RBP	4.23	□□□□□ -1.73
NHP6A	YPR052C	DLT1	Q04216	342 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	TRM13	Q12383	476 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	GEP5	Q12393	293 aa		4.23	□□□□□ -1.73
NHP6A	YPR052C	URA3	P03962	267 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RPL15A	P05748	204 aa	Known RBP	4.22	□□□□□ -1.73
NHP6A	YPR052C	DSF1	P0CX08	502 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	YNR073C	P0CX09	502 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RPI1	P23250	407 aa	Known RBP	4.22	□□□□□ -1.73
NHP6A	YPR052C	YCR016W	P25617	290 aa	Known RBP	4.22	□□□□□ -1.73
NHP6A	YPR052C	FLO10	P36170	1169 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	MRPL39	P36533	70 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	SLZ1	P40167	298 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	YIL169C	P40442	995 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	QDR1	P40475	563 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	PHB2	P50085	310 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	JAC1	P53193	184 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	GTF1	P53260	183 aa	Predicted RBP	4.22	□□□□□ -1.73
NHP6A	YPR052C	SLI1	P53304	468 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RNH201	P53942	307 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RPL15B	P54780	204 aa	Predicted RBP	4.22	□□□□□ -1.73
NHP6A	YPR052C	KAP120	Q02932	1032 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	PRM15	Q03262	622 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RAF1	Q06891	181 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	MCT1	Q12283	360 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	ATG31	Q12421	196 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	RRI1	Q12468	440 aa		4.22	□□□□□ -1.73
NHP6A	YPR052C	COX5B	P00425	151 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	MES1	P00958	751 aa	Known RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	AAC1	P04710	309 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	CDC34	P14682	295 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	SEN2	P16658	377 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	SPO7	P18410	259 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	CPR4	P25334	318 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	YCR061W	P25639	631 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	VMA5	P31412	392 aa	Known RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	SUA5	P32579	426 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	AGA2	P32781	87 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	FMT1	P32785	401 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	SOF1	P33750	489 aa	Known RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	MRPS5	P33759	307 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	PAN3	P36102	679 aa	Predicted RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	YHL037C	P38733	133 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	ARO9	P38840	513 aa	Predicted RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	AIM46	P38885	310 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	GPP1	P41277	250 aa	Known RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	LSM1	P47017	172 aa	Known RBP	4.21	□□□□□ -1.74
NHP6A	YPR052C	PRY1	P47032	299 aa		4.21	□□□□□ -1.74
NHP6A	YPR052C	LOH1	P47055	219 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms