RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeastyeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBP6YNR038W YKR104WP0CE69 306 aa0.65□□□□□ -2.3
DBP6YNR038W MATALPHA1P0CY06 175 aa0.65□□□□□ -2.3
DBP6YNR038W HMLALPHA1P0CY07 175 aa0.65□□□□□ -2.3
DBP6YNR038W RNA15P25299 296 aaPredicted RBP0.65□□□□□ -2.3
DBP6YNR038W YCR102CP25608 368 aa0.65□□□□□ -2.3
DBP6YNR038W LDB7P38210 180 aa0.65□□□□□ -2.3
DBP6YNR038W SMD3P43321 101 aaKnown RBP0.65□□□□□ -2.3
DBP6YNR038W SNZ3P43545 298 aa0.65□□□□□ -2.3
DBP6YNR038W RPL26BP53221 127 aaKnown RBP0.65□□□□□ -2.3
DBP6YNR038W SSU72P53538 206 aaPredicted RBP0.65□□□□□ -2.3
DBP6YNR038W PET117Q02771 107 aa0.65□□□□□ -2.3
DBP6YNR038W YLR283WQ05867 314 aa0.65□□□□□ -2.3
DBP6YNR038W PAM18Q07914 168 aa0.65□□□□□ -2.3
DBP6YNR038W YCT1Q12235 531 aa0.65□□□□□ -2.3
DBP6YNR038W YPR011CQ12251 326 aa0.65□□□□□ -2.3
DBP6YNR038W EMP46Q12396 444 aa0.65□□□□□ -2.3
DBP6YNR038W ISD11Q6Q560 94 aa0.65□□□□□ -2.3
DBP6YNR038W NUP157P40064 1391 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W CFT1Q06632 1357 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W RAD10P06838 210 aa0.65□□□□□ -2.31
DBP6YNR038W MRP1P10662 321 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W DPM1P14020 267 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W SEC22P22214 214 aa0.65□□□□□ -2.31
DBP6YNR038W VPS3P23643 1011 aa0.65□□□□□ -2.31
DBP6YNR038W SCO1P23833 295 aa0.65□□□□□ -2.31
DBP6YNR038W DPB2P24482 689 aaPredicted RBP0.65□□□□□ -2.31
DBP6YNR038W BMH1P29311 267 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W SFC1P33303 322 aa0.65□□□□□ -2.31
DBP6YNR038W SPT8P38915 602 aa0.65□□□□□ -2.31
DBP6YNR038W BFR1P38934 470 aaKnown RBP RIP-Chip data0.65□□□□□ -2.31 RIP-Chip
DBP6YNR038W TEM1P38987 245 aa0.65□□□□□ -2.31
DBP6YNR038W FMC1P40491 155 aa0.65□□□□□ -2.31
DBP6YNR038W YJR146WP47174 117 aa0.65□□□□□ -2.31
DBP6YNR038W YJR149WP47177 404 aa0.65□□□□□ -2.31
DBP6YNR038W NIF3P53081 288 aa0.65□□□□□ -2.31
DBP6YNR038W USE1P53146 245 aa0.65□□□□□ -2.31
DBP6YNR038W TOS8P53147 276 aa0.65□□□□□ -2.31
DBP6YNR038W SLX9P53251 210 aaPredicted RBP0.65□□□□□ -2.31
DBP6YNR038W RSM27P53305 110 aa0.65□□□□□ -2.31
DBP6YNR038W SNZ2P53824 298 aa0.65□□□□□ -2.31
DBP6YNR038W NOP13P53883 403 aaKnown RBP RIP-Chip data0.65□□□□□ -2.31not detected
DBP6YNR038W YNL046WP53956 172 aa0.65□□□□□ -2.31
DBP6YNR038W ASI3P53983 676 aa0.65□□□□□ -2.31
DBP6YNR038W GRX3Q03835 250 aa0.65□□□□□ -2.31
DBP6YNR038W SPG4Q04438 115 aa0.65□□□□□ -2.31
DBP6YNR038W YMR114CQ04471 368 aaKnown RBP0.65□□□□□ -2.31
DBP6YNR038W RNH1Q04740 348 aa0.65□□□□□ -2.31
DBP6YNR038W PEX10Q05568 337 aa0.65□□□□□ -2.31
DBP6YNR038W SEI1Q06058 285 aa0.65□□□□□ -2.31
DBP6YNR038W YPR098CQ06089 161 aa0.65□□□□□ -2.31
DBP6YNR038W MSA1Q08471 629 aa0.65□□□□□ -2.31
DBP6YNR038W SYC1Q08553 188 aaPredicted RBP0.65□□□□□ -2.31
DBP6YNR038W YOR186WQ08560 144 aa0.65□□□□□ -2.31
DBP6YNR038W MED4Q12343 284 aa0.65□□□□□ -2.31
DBP6YNR038W GEP5Q12393 293 aa0.65□□□□□ -2.31
DBP6YNR038W SWI1P09547 1314 aa0.64□□□□□ -2.31
DBP6YNR038W RHO1P06780 209 aaKnown RBP0.64□□□□□ -2.31
DBP6YNR038W ARG80P07249 177 aa0.64□□□□□ -2.31
DBP6YNR038W ERD2P18414 219 aa0.64□□□□□ -2.31
DBP6YNR038W NTF2P33331 125 aaKnown RBP0.64□□□□□ -2.31
DBP6YNR038W DRE2P36152 348 aa0.64□□□□□ -2.31
DBP6YNR038W URA8P38627 578 aaPredicted RBP0.64□□□□□ -2.31
DBP6YNR038W RTC3P38804 111 aaPredicted RBP0.64□□□□□ -2.31
DBP6YNR038W CTR2P38865 189 aa0.64□□□□□ -2.31
DBP6YNR038W FCY21P40039 528 aa0.64□□□□□ -2.31
DBP6YNR038W YER085CP40058 173 aa0.64□□□□□ -2.31
DBP6YNR038W GON7P46984 123 aa0.64□□□□□ -2.31
DBP6YNR038W RPC17P47076 161 aa0.64□□□□□ -2.31
DBP6YNR038W YDR209CQ03480 137 aa0.64□□□□□ -2.31
DBP6YNR038W KRE28Q04431 385 aa0.64□□□□□ -2.31
DBP6YNR038W SPO77Q06134 477 aa0.64□□□□□ -2.31
DBP6YNR038W YLR179CQ06252 201 aaKnown RBP0.64□□□□□ -2.31
DBP6YNR038W ATG17Q06410 417 aa0.64□□□□□ -2.31
DBP6YNR038W YPR147CQ06522 304 aaKnown RBP0.64□□□□□ -2.31
DBP6YNR038W RRP40Q08285 240 aaKnown RBP0.64□□□□□ -2.31
DBP6YNR038W YHR086W-AQ3E746 53 aa0.64□□□□□ -2.31
DBP6YNR038W YBL008W-AQ3E821 79 aa0.64□□□□□ -2.31
DBP6YNR038W YEL009C-AA0A023PZF2 135 aa0.63□□□□□ -2.31
DBP6YNR038W COX5AP00424 153 aa0.63□□□□□ -2.31
DBP6YNR038W SNA3P14359 133 aa0.63□□□□□ -2.31
DBP6YNR038W YCR016WP25617 290 aaKnown RBP0.63□□□□□ -2.31
DBP6YNR038W RNP1P32385 249 aa0.63□□□□□ -2.31
DBP6YNR038W MSN4P33749 630 aa0.63□□□□□ -2.31
DBP6YNR038W MSA2P36157 363 aa0.63□□□□□ -2.31
DBP6YNR038W RTR1P40084 226 aaPredicted RBP0.63□□□□□ -2.31
DBP6YNR038W COG3P40094 801 aa0.63□□□□□ -2.31
DBP6YNR038W TIF34P40217 347 aaKnown RBP0.63□□□□□ -2.31
DBP6YNR038W OTU1P43558 301 aa0.63□□□□□ -2.31
DBP6YNR038W RPA43P46669 326 aa0.63□□□□□ -2.31
DBP6YNR038W YGL159WP53110 370 aa0.63□□□□□ -2.31
DBP6YNR038W RDS3Q06835 107 aaPredicted RBP0.63□□□□□ -2.31
DBP6YNR038W YLR030WQ07967 263 aa0.63□□□□□ -2.31
DBP6YNR038W YPL150WQ12152 901 aa0.63□□□□□ -2.31
DBP6YNR038W SRY1P36007 326 aa0.63□□□□□ -2.31
DBP6YNR038W VPS21P36017 210 aaKnown RBP0.63□□□□□ -2.31
DBP6YNR038W MAL32P38158 584 aa0.63□□□□□ -2.31
DBP6YNR038W FZO1P38297 855 aa0.63□□□□□ -2.31
DBP6YNR038W YHR127WP38833 243 aaKnown RBP0.63□□□□□ -2.31
DBP6YNR038W YHB1P39676 399 aaKnown RBP0.63□□□□□ -2.31
DBP6YNR038W YER189WP40104 122 aa0.63□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms