RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W BOS1P25385 244 aa3.22□□□□□ -1.89
SSL1YLR005W DEG1P31115 442 aaKnown RBP3.22□□□□□ -1.89
SSL1YLR005W NTG1P31378 399 aa3.22□□□□□ -1.89
SSL1YLR005W SPC34P36131 295 aa3.22□□□□□ -1.89
SSL1YLR005W YPT10P38146 199 aa3.22□□□□□ -1.89
SSL1YLR005W FZO1P38297 855 aa3.22□□□□□ -1.89
SSL1YLR005W ARC40P38328 384 aaKnown RBP3.22□□□□□ -1.89
SSL1YLR005W MAM33P40513 266 aa3.22□□□□□ -1.89
SSL1YLR005W RPS0BP46654 252 aaKnown RBP3.22□□□□□ -1.89
SSL1YLR005W CIN2P46670 268 aa3.22□□□□□ -1.89
SSL1YLR005W BNA1P47096 177 aa3.22□□□□□ -1.89
SSL1YLR005W YDL186WP48568 277 aa3.22□□□□□ -1.89
SSL1YLR005W UFD1P53044 361 aa3.22□□□□□ -1.89
SSL1YLR005W SPR6Q01684 191 aa3.22□□□□□ -1.89
SSL1YLR005W ACL4Q03771 387 aa3.22□□□□□ -1.89
SSL1YLR005W AIM36Q03798 255 aa3.22□□□□□ -1.89
SSL1YLR005W YMR317WQ04893 1140 aa3.22□□□□□ -1.89
SSL1YLR005W ADH6Q04894 360 aaKnown RBP3.22□□□□□ -1.89
SSL1YLR005W RAX2Q12465 1220 aa3.22□□□□□ -1.89
SSL1YLR005W ADF1Q2V2Q1 113 aa3.22□□□□□ -1.89
SSL1YLR005W RPL39P04650 51 aa3.21□□□□□ -1.9
SSL1YLR005W OPI3P05375 206 aa3.21□□□□□ -1.9
SSL1YLR005W ILV5P06168 395 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W RPS8AP0CX39 200 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W RPS8BP0CX40 200 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W PHO80P20052 293 aa3.21□□□□□ -1.9
SSL1YLR005W SUA7P29055 345 aaPredicted RBP3.21□□□□□ -1.9
SSL1YLR005W APE2P32454 952 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W YNK1P36010 153 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W MCH2P36032 473 aa3.21□□□□□ -1.9
SSL1YLR005W YBR063CP38083 404 aa3.21□□□□□ -1.9
SSL1YLR005W CHL4P38907 458 aa3.21□□□□□ -1.9
SSL1YLR005W PHO90P39535 881 aa3.21□□□□□ -1.9
SSL1YLR005W SPO73P40031 143 aa3.21□□□□□ -1.9
SSL1YLR005W PUG1P40100 303 aa3.21□□□□□ -1.9
SSL1YLR005W OST1P41543 476 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W FAR7P43592 221 aa3.21□□□□□ -1.9
SSL1YLR005W TMA22P47089 198 aaPredicted RBP3.21□□□□□ -1.9
SSL1YLR005W PUS4P48567 403 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W COS10P52924 374 aa3.21□□□□□ -1.9
SSL1YLR005W RRN9P53437 365 aa3.21□□□□□ -1.9
SSL1YLR005W YPL067CQ02754 198 aa3.21□□□□□ -1.9
SSL1YLR005W MSS11Q03825 758 aa3.21□□□□□ -1.9
SSL1YLR005W MRX8Q05473 314 aa3.21□□□□□ -1.9
SSL1YLR005W RRP9Q06506 573 aaKnown RBP3.21□□□□□ -1.9
SSL1YLR005W RFU1Q08003 200 aa3.21□□□□□ -1.9
SSL1YLR005W VIK1Q12045 647 aa3.21□□□□□ -1.9
SSL1YLR005W SPS4P09937 338 aa3.2□□□□□ -1.9
SSL1YLR005W YAK1P14680 807 aa3.2□□□□□ -1.9
SSL1YLR005W PWP1P21304 576 aaKnown RBP3.2□□□□□ -1.9
SSL1YLR005W MEK1P24719 497 aaPredicted RBP3.2□□□□□ -1.9
SSL1YLR005W ACH1P32316 526 aa3.2□□□□□ -1.9
SSL1YLR005W YPK3P38070 525 aa3.2□□□□□ -1.9
SSL1YLR005W FIG1P38224 298 aa3.2□□□□□ -1.9
SSL1YLR005W ECM8P38246 354 aa3.2□□□□□ -1.9
SSL1YLR005W SFH5P47008 294 aa3.2□□□□□ -1.9
SSL1YLR005W YJL016WP47072 561 aa3.2□□□□□ -1.9
SSL1YLR005W PRM8P53174 237 aa3.2□□□□□ -1.9
SSL1YLR005W YNR048WP53740 393 aa3.2□□□□□ -1.9
SSL1YLR005W SAM50P53969 484 aa3.2□□□□□ -1.9
SSL1YLR005W SPC24Q04477 213 aa3.2□□□□□ -1.9
SSL1YLR005W ELP6Q04868 273 aa3.2□□□□□ -1.9
SSL1YLR005W ASA1Q06822 443 aa3.2□□□□□ -1.9
SSL1YLR005W SSK1Q07084 712 aa3.2□□□□□ -1.9
SSL1YLR005W GSH2Q08220 491 aa3.2□□□□□ -1.9
SSL1YLR005W SRL1Q08673 210 aa3.2□□□□□ -1.9
SSL1YLR005W YOR289WQ12012 251 aaPredicted RBP3.2□□□□□ -1.9
SSL1YLR005W YLR108CQ12259 485 aa3.2□□□□□ -1.9
SSL1YLR005W MES1P00958 751 aaKnown RBP3.19□□□□□ -1.9
SSL1YLR005W STE18P18852 110 aa3.19□□□□□ -1.9
SSL1YLR005W REC114P32841 428 aa3.19□□□□□ -1.9
SSL1YLR005W YOX1P34161 385 aa3.19□□□□□ -1.9
SSL1YLR005W RTC2P38279 296 aa3.19□□□□□ -1.9
SSL1YLR005W YHR035WP38769 630 aa3.19□□□□□ -1.9
SSL1YLR005W SBE22P38814 852 aa3.19□□□□□ -1.9
SSL1YLR005W CTR2P38865 189 aa3.19□□□□□ -1.9
SSL1YLR005W CTK2P46962 323 aa3.19□□□□□ -1.9
SSL1YLR005W XPT1P47165 209 aa3.19□□□□□ -1.9
SSL1YLR005W NSA1P53136 463 aaPredicted RBP3.19□□□□□ -1.9
SSL1YLR005W NQM1P53228 333 aaPredicted RBP3.19□□□□□ -1.9
SSL1YLR005W HHT1P61830 136 aa3.19□□□□□ -1.9
SSL1YLR005W YDR248CQ03786 193 aa3.19□□□□□ -1.9
SSL1YLR005W SWA2Q06677 668 aa3.19□□□□□ -1.9
SSL1YLR005W YDL009CQ12210 107 aa3.19□□□□□ -1.9
SSL1YLR005W COX5BP00425 151 aa3.18□□□□□ -1.9
SSL1YLR005W RPC40P07703 335 aaKnown RBP3.18□□□□□ -1.9
SSL1YLR005W YER190C-BP0CX94 160 aa3.18□□□□□ -1.9
SSL1YLR005W YEL077W-AP0CX95 160 aa3.18□□□□□ -1.9
SSL1YLR005W YGR296C-BP0CX96 160 aa3.18□□□□□ -1.9
SSL1YLR005W YPL283W-BP0CX97 160 aa3.18□□□□□ -1.9
SSL1YLR005W YPR204C-AP0CX98 160 aa3.18□□□□□ -1.9
SSL1YLR005W YFL068WP0CX99 160 aa3.18□□□□□ -1.9
SSL1YLR005W YLL066W-AP0CY00 160 aa3.18□□□□□ -1.9
SSL1YLR005W YLL067W-AP0CY01 160 aa3.18□□□□□ -1.9
SSL1YLR005W CPR2P23285 205 aa3.18□□□□□ -1.9
SSL1YLR005W MRPL6P32904 214 aa3.18□□□□□ -1.9
SSL1YLR005W YKR015CP36111 568 aa3.18□□□□□ -1.9
SSL1YLR005W THO1P40040 218 aaKnown RBP3.18□□□□□ -1.9
SSL1YLR005W RRG9P40156 214 aa3.18□□□□□ -1.9
SSL1YLR005W DIM1P41819 318 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms