RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C PAN1P32521 1480 aa1.1□□□□□ -2.23
RPL40BYKR094C RPL28P02406 149 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C RHO1P06780 209 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C PRE7P23724 241 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C PBN1P25580 416 aa1.09□□□□□ -2.23
RPL40BYKR094C RNP1P32385 249 aa1.09□□□□□ -2.23
RPL40BYKR094C SFC1P33303 322 aa1.09□□□□□ -2.23
RPL40BYKR094C TKL2P33315 681 aa1.09□□□□□ -2.23
RPL40BYKR094C VPS21P36017 210 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C YBL081WP38180 368 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C TRM7P38238 310 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C MIC12P38341 106 aa1.09□□□□□ -2.23
RPL40BYKR094C TEM1P38987 245 aa1.09□□□□□ -2.23
RPL40BYKR094C YRB1P41920 201 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C GLG2P47011 380 aa1.09□□□□□ -2.23
RPL40BYKR094C ILM1P47155 203 aa1.09□□□□□ -2.23
RPL40BYKR094C JHD2P47156 728 aaPredicted RBP1.09□□□□□ -2.23
RPL40BYKR094C MIG2P53035 382 aa1.09□□□□□ -2.23
RPL40BYKR094C OSH6Q02201 448 aa1.09□□□□□ -2.23
RPL40BYKR094C YMR226CQ05016 267 aaKnown RBP1.09□□□□□ -2.23
RPL40BYKR094C DCR2Q05924 578 aa1.09□□□□□ -2.23
RPL40BYKR094C SPO77Q06134 477 aa1.09□□□□□ -2.23
RPL40BYKR094C YOL019WQ08157 551 aa1.09□□□□□ -2.23
RPL40BYKR094C SYC1Q08553 188 aaPredicted RBP1.09□□□□□ -2.23
RPL40BYKR094C YPL264CQ08980 353 aa1.09□□□□□ -2.23
RPL40BYKR094C YLR126CQ12288 251 aa1.09□□□□□ -2.23
RPL40BYKR094C ATG5Q12380 294 aa1.09□□□□□ -2.23
RPL40BYKR094C GIS3Q12418 502 aa1.09□□□□□ -2.23
RPL40BYKR094C MRX4Q12467 430 aa1.09□□□□□ -2.23
RPL40BYKR094C IPP1P00817 287 aaKnown RBP1.08□□□□□ -2.24
RPL40BYKR094C YBR121C-AP0C5L4 52 aa1.08□□□□□ -2.24
RPL40BYKR094C YMR31P19955 123 aa1.08□□□□□ -2.24
RPL40BYKR094C DPB2P24482 689 aaPredicted RBP1.08□□□□□ -2.24
RPL40BYKR094C CDC10P25342 322 aaKnown RBP1.08□□□□□ -2.24
RPL40BYKR094C GDH2P33327 1092 aaKnown RBP1.08□□□□□ -2.24
RPL40BYKR094C PRP18P33411 251 aaPredicted RBP1.08□□□□□ -2.24
RPL40BYKR094C SDH4P37298 181 aa1.08□□□□□ -2.24
RPL40BYKR094C SIP3P38717 1229 aa1.08□□□□□ -2.24
RPL40BYKR094C GOS1P38736 223 aa1.08□□□□□ -2.24
RPL40BYKR094C SUR2P38992 349 aa1.08□□□□□ -2.24
RPL40BYKR094C YJL028WP47062 111 aa1.08□□□□□ -2.24
RPL40BYKR094C RPC17P47076 161 aa1.08□□□□□ -2.24
RPL40BYKR094C MRH4P53166 561 aa1.08□□□□□ -2.24
RPL40BYKR094C FYV6P53913 173 aa1.08□□□□□ -2.24
RPL40BYKR094C YPL039WQ03080 316 aa1.08□□□□□ -2.24
RPL40BYKR094C YML108WQ03759 105 aa1.08□□□□□ -2.24
RPL40BYKR094C CDC123Q05791 360 aa1.08□□□□□ -2.24
RPL40BYKR094C COQ10Q08058 207 aa1.08□□□□□ -2.24
RPL40BYKR094C YRA1Q12159 226 aaKnown RBP1.08□□□□□ -2.24
RPL40BYKR094C YPR011CQ12251 326 aa1.08□□□□□ -2.24
RPL40BYKR094C SMT3Q12306 101 aaKnown RBP1.08□□□□□ -2.24
RPL40BYKR094C PRR2Q12310 699 aa1.08□□□□□ -2.24
RPL40BYKR094C JLP1Q12358 412 aa1.08□□□□□ -2.24
RPL40BYKR094C NCB2Q92317 146 aa1.08□□□□□ -2.24
RPL40BYKR094C CDC36P06100 191 aaPredicted RBP1.07□□□□□ -2.24
RPL40BYKR094C ADH3P07246 375 aaKnown RBP1.07□□□□□ -2.24
RPL40BYKR094C PPH21P23594 369 aa1.07□□□□□ -2.24
RPL40BYKR094C YCR102CP25608 368 aa1.07□□□□□ -2.24
RPL40BYKR094C IDH1P28834 360 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
RPL40BYKR094C CBT1P36038 271 aaPredicted RBP1.07□□□□□ -2.24
RPL40BYKR094C CAB3P36076 571 aa1.07□□□□□ -2.24
RPL40BYKR094C RIB1P38066 345 aa1.07□□□□□ -2.24
RPL40BYKR094C ECM14P38836 430 aa1.07□□□□□ -2.24
RPL40BYKR094C YFR045WP43617 309 aa1.07□□□□□ -2.24
RPL40BYKR094C RAD17P48581 401 aa1.07□□□□□ -2.24
RPL40BYKR094C TRM9P49957 279 aa1.07□□□□□ -2.24
RPL40BYKR094C RMR1P53060 241 aa1.07□□□□□ -2.24
RPL40BYKR094C GIM3P53900 129 aa1.07□□□□□ -2.24
RPL40BYKR094C CTF19Q02732 369 aa1.07□□□□□ -2.24
RPL40BYKR094C YMD8Q03697 442 aa1.07□□□□□ -2.24
RPL40BYKR094C YMR166CQ03829 368 aa1.07□□□□□ -2.24
RPL40BYKR094C YDR222WQ04925 415 aa1.07□□□□□ -2.24
RPL40BYKR094C SSQ1Q05931 657 aaPredicted RBP1.07□□□□□ -2.24
RPL40BYKR094C SEI1Q06058 285 aa1.07□□□□□ -2.24
RPL40BYKR094C YLR179CQ06252 201 aaKnown RBP1.07□□□□□ -2.24
RPL40BYKR094C LOA1Q06508 300 aa1.07□□□□□ -2.24
RPL40BYKR094C RLP24Q07915 199 aaKnown RBP1.07□□□□□ -2.24
RPL40BYKR094C TIM22Q12328 207 aa1.07□□□□□ -2.24
RPL40BYKR094C BBP1Q12365 385 aa1.07□□□□□ -2.24
RPL40BYKR094C ADF1Q2V2Q1 113 aa1.07□□□□□ -2.24
RPL40BYKR094C SWI1P09547 1314 aa1.07□□□□□ -2.24
RPL40BYKR094C SAC3P46674 1301 aa1.07□□□□□ -2.24
RPL40BYKR094C SIR4P11978 1358 aa1.07□□□□□ -2.24
RPL40BYKR094C COX5AP00424 153 aa1.06□□□□□ -2.24
RPL40BYKR094C ARG80P07249 177 aa1.06□□□□□ -2.24
RPL40BYKR094C BCY1P07278 416 aaKnown RBP1.06□□□□□ -2.24
RPL40BYKR094C CBF1P17106 351 aa1.06□□□□□ -2.24
RPL40BYKR094C RPO26P20435 155 aa1.06□□□□□ -2.24
RPL40BYKR094C SEC22P22214 214 aa1.06□□□□□ -2.24
RPL40BYKR094C RPS5P26783 225 aaKnown RBP1.06□□□□□ -2.24
RPL40BYKR094C YBR096WP38256 230 aa1.06□□□□□ -2.24
RPL40BYKR094C ERG28P40030 148 aa1.06□□□□□ -2.24
RPL40BYKR094C YER189WP40104 122 aa1.06□□□□□ -2.24
RPL40BYKR094C YNL194CP40169 301 aa1.06□□□□□ -2.24
RPL40BYKR094C RFC4P40339 323 aaKnown RBP1.06□□□□□ -2.24
RPL40BYKR094C HAM1P47119 197 aaKnown RBP1.06□□□□□ -2.24
RPL40BYKR094C MCM22P47167 239 aa1.06□□□□□ -2.24
RPL40BYKR094C MIC26P50087 233 aa1.06□□□□□ -2.24
RPL40BYKR094C MRPS17Q03246 237 aaPredicted RBP1.06□□□□□ -2.24
RPL40BYKR094C EMI1Q04406 187 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms