RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W SED5Q01590 340 aa0.72□□□□□ -2.29
PRP16YKR086W SPP2Q02521 185 aa0.72□□□□□ -2.29
PRP16YKR086W YDR391CQ04170 232 aa0.72□□□□□ -2.29
PRP16YKR086W EMI1Q04406 187 aa0.72□□□□□ -2.29
PRP16YKR086W YPR098CQ06089 161 aa0.72□□□□□ -2.29
PRP16YKR086W CSM4Q08955 156 aa0.72□□□□□ -2.29
PRP16YKR086W JLP1Q12358 412 aa0.72□□□□□ -2.29
PRP16YKR086W YOR032W-AQ8TGS1 66 aa0.72□□□□□ -2.29
PRP16YKR086W IGO2Q9P305 131 aa0.72□□□□□ -2.29
PRP16YKR086W BI3Q9ZZW7 517 aa0.72□□□□□ -2.29
PRP16YKR086W FMP27Q06179 2628 aa0.71□□□□□ -2.3
PRP16YKR086W CBP2P03874 630 aaPredicted RBP0.71□□□□□ -2.3
PRP16YKR086W YGL041W-AP0C5N3 154 aa0.71□□□□□ -2.3
PRP16YKR086W YAK1P14680 807 aa0.71□□□□□ -2.3
PRP16YKR086W UGA1P17649 471 aa0.71□□□□□ -2.3
PRP16YKR086W RRP7P25368 297 aaPredicted RBP0.71□□□□□ -2.3
PRP16YKR086W ATG22P25568 528 aa0.71□□□□□ -2.3
PRP16YKR086W HOM6P31116 359 aaKnown RBP0.71□□□□□ -2.3
PRP16YKR086W RNP1P32385 249 aa0.71□□□□□ -2.3
PRP16YKR086W MID2P36027 376 aa0.71□□□□□ -2.3
PRP16YKR086W CBT1P36038 271 aaPredicted RBP0.71□□□□□ -2.3
PRP16YKR086W MIC12P38341 106 aa0.71□□□□□ -2.3
PRP16YKR086W YHR127WP38833 243 aaKnown RBP0.71□□□□□ -2.3
PRP16YKR086W YHB1P39676 399 aaKnown RBP0.71□□□□□ -2.3
PRP16YKR086W SSO2P39926 295 aa0.71□□□□□ -2.3
PRP16YKR086W LSM5P40089 93 aaKnown RBP0.71□□□□□ -2.3
PRP16YKR086W MST27P53176 234 aa0.71□□□□□ -2.3
PRP16YKR086W FYV6P53913 173 aa0.71□□□□□ -2.3
PRP16YKR086W ERV41Q04651 352 aa0.71□□□□□ -2.3
PRP16YKR086W STE23Q06010 1027 aa0.71□□□□□ -2.3
PRP16YKR086W BRX1Q08235 291 aaKnown RBP0.71□□□□□ -2.3
PRP16YKR086W SRL2Q12020 392 aa0.71□□□□□ -2.3
PRP16YKR086W ATP16Q12165 160 aa0.71□□□□□ -2.3
PRP16YKR086W YGK3Q12222 375 aaPredicted RBP0.71□□□□□ -2.3
PRP16YKR086W RUP1Q12242 671 aa0.71□□□□□ -2.3
PRP16YKR086W ACB1P31787 87 aa0.71□□□□□ -2.3
PRP16YKR086W COY1P34237 679 aa0.71□□□□□ -2.3
PRP16YKR086W YCR087C-AP37263 153 aa0.71□□□□□ -2.3
PRP16YKR086W RFT1P38206 574 aaPredicted RBP0.71□□□□□ -2.3
PRP16YKR086W YAL037WP39728 267 aa0.71□□□□□ -2.3
PRP16YKR086W CHS6P40955 746 aa0.71□□□□□ -2.3
PRP16YKR086W YLR177WQ06251 628 aa0.71□□□□□ -2.3
PRP16YKR086W YDL199CQ12407 687 aa0.71□□□□□ -2.3
PRP16YKR086W FMP16Q12497 93 aa0.71□□□□□ -2.3
PRP16YKR086W QCR2P07257 368 aa0.7□□□□□ -2.3
PRP16YKR086W PET494P07390 489 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W SSC1P0CS90 654 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W CKS1P20486 150 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W IFM1P25038 676 aa0.7□□□□□ -2.3
PRP16YKR086W KRR1P25586 316 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W ATG12P38316 186 aa0.7□□□□□ -2.3
PRP16YKR086W RCK2P38623 610 aa0.7□□□□□ -2.3
PRP16YKR086W MLH1P38920 769 aa0.7□□□□□ -2.3
PRP16YKR086W GIM4P40005 111 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W ARO8P53090 500 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W YNR068CP53754 272 aa0.7□□□□□ -2.3
PRP16YKR086W APC4Q04601 652 aa0.7□□□□□ -2.3
PRP16YKR086W DPP1Q05521 289 aa0.7□□□□□ -2.3
PRP16YKR086W NOP6Q07623 225 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W COX4P04037 155 aa0.7□□□□□ -2.3
PRP16YKR086W GCY1P14065 312 aaKnown RBP RIP-Chip data0.7□□□□□ -2.3not detected
PRP16YKR086W SAG1P20840 650 aa0.7□□□□□ -2.3
PRP16YKR086W URA7P28274 579 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W MRPL27P36526 146 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W IST2P38250 946 aa0.7□□□□□ -2.3
PRP16YKR086W YHL044WP38727 235 aa0.7□□□□□ -2.3
PRP16YKR086W RFC4P40339 323 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W YIL059CP40520 121 aa0.7□□□□□ -2.3
PRP16YKR086W ARP3P47117 449 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W BRR6P53062 197 aa0.7□□□□□ -2.3
PRP16YKR086W RTT102P53330 157 aa0.7□□□□□ -2.3
PRP16YKR086W SSU72P53538 206 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W PDR16P53860 351 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W YML108WQ03759 105 aa0.7□□□□□ -2.3
PRP16YKR086W ATG38Q05789 226 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W YOR338WQ99326 363 aa0.7□□□□□ -2.3
PRP16YKR086W RPL25P04456 142 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W YBR121C-AP0C5L4 52 aa0.7□□□□□ -2.3
PRP16YKR086W RPL1AP0CX43 217 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W RPL1BP0CX44 217 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W RPS18AP0CX55 146 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W RPS18BP0CX56 146 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W TCP1P12612 559 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W APA2P22108 325 aa0.7□□□□□ -2.3
PRP16YKR086W UBA1P22515 1024 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W PEX34P25584 144 aa0.7□□□□□ -2.3
PRP16YKR086W RPL5P26321 297 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W IME2P32581 645 aa0.7□□□□□ -2.3
PRP16YKR086W SPT4P32914 102 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W PPQ1P32945 549 aa0.7□□□□□ -2.3
PRP16YKR086W DTR1P38125 572 aa0.7□□□□□ -2.3
PRP16YKR086W FRT2P39734 528 aa0.7□□□□□ -2.3
PRP16YKR086W YFH7P43591 353 aa0.7□□□□□ -2.3
PRP16YKR086W ATG18P43601 500 aa0.7□□□□□ -2.3
PRP16YKR086W YFR054CP43622 192 aa0.7□□□□□ -2.3
PRP16YKR086W TMA22P47089 198 aaPredicted RBP0.7□□□□□ -2.3
PRP16YKR086W MPC1P53157 130 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W VPS60Q03390 229 aa0.7□□□□□ -2.3
PRP16YKR086W EBS1Q03466 884 aaKnown RBP0.7□□□□□ -2.3
PRP16YKR086W TAF9Q05027 157 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms